Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S543820.g20921.01.t

Possible name(s)

FGF16; FGF20; FGF9

Gene model

Moocci.CG.ELv1_2.S543820.g20921

Location

S543820 [35,918 / 37,520]

Sequences

Amino acid sequence

Length: 303

>Moocci.CG.ELv1_2.S543820.g20921.01.p
MSLSGILSGQSTTETQNNLSSVILTVLLKAKKFTFHKDEVKPNAPGRRISMEEVKPLPLR
RHRHLAGKHSRHHSQKINENIEIEETASPKIIDEASMPIVHDRLPDPDLWKKLQFEEDEQ
DQEEFDMDSDITELHDDTLDISAPSRPIRSVSTHGVVRFKQLYCRTGFHLQILPNGEVAG
TRQDHNPYAILEFKSVGIGIVSIRGLKSGLYLTMDDKGQLYGSERLSPDYGYFSETILEN
YYNTYSTIRQRNHSVKRSCYVALGKSGHKRAGCRSKKAQKFTHFLPRDVLKHKVPRLYTG
VDF

Nucleotide sequence

Length: 912

>Moocci.CG.ELv1_2.S543820.g20921.01.t
ATGTCGTTATCCGGAATATTAAGTGGACAATCAACAACAGAAACTCAAAATAATTTATCG
TCAGTCATATTAACAGTATTGTTGAAAGCAAAAAAATTTACATTTCACAAAGATGAAGTT
AAACCAAATGCCCCTGGACGACGAATCAGTATGGAAGAAGTAAAGCCTTTGCCTTTGCGA
AGACACAGACATTTAGCAGGAAAACACAGCCGACACCATAGTCAGAAAATTAACGAAAAT
ATCGAAATTGAAGAAACTGCTAGCCCAAAAATTATTGACGAAGCATCAATGCCAATTGTA
CATGATCGTCTTCCAGATCCTGATTTATGGAAAAAACTTCAATTTGAAGAAGATGAACAA
GACCAAGAGGAATTTGACATGGATTCGGATATTACTGAACTACATGATGATACCTTGGAT
ATATCTGCACCAAGCCGTCCCATACGAAGCGTATCGACACATGGCGTCGTCCGATTCAAA
CAGTTATACTGTAGAACTGGTTTTCATCTCCAAATCTTGCCTAATGGCGAAGTAGCTGGA
ACAAGACAAGACCACAATCCATATGCTATTCTTGAATTCAAATCTGTCGGTATAGGAATT
GTCAGCATACGGGGTCTCAAAAGTGGTCTTTACTTAACTATGGACGATAAAGGACAGTTA
TACGGATCGGAAAGACTTTCGCCCGATTACGGTTATTTCAGCGAAACTATATTGGAAAAT
TATTACAACACATATTCAACCATTCGACAGCGAAACCACTCAGTCAAACGTTCGTGCTAC
GTCGCTTTGGGAAAATCAGGTCACAAACGAGCGGGCTGTCGTTCCAAAAAGGCGCAGAAA
TTTACTCATTTTTTACCCCGGGATGTTTTAAAACATAAAGTACCGCGACTGTACACAGGA
GTGGATTTTTAG

InterProScan

PANTHER	FGF20 (IPR028291) - T[152-300] 3.8E-55
PANTHER	Fibroblast_GF_fam (IPR002209) - T[152-300] 3.8E-55
SUPERFAMILY	IL1/FGF (IPR008996) - T[153-294] 3.14E-44
SMART	Fibroblast_GF_fam (IPR002209) - T[156-288] 5.9E-45
Pfam	Fibroblast_GF_fam (IPR002209) - T[158-285] 1.5E-39
PRINTS	Fibroblast_GF_fam (IPR002209) - T[160-172] 1.8E-13 - T[191-205] 1.8E-13 - T[211-223] 1.8E-13
CDD	Fibroblast_GF_fam (IPR002209) - T[160-287] 4.13823E-45

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
FGF16_HUMAN	52.448 %	157	2.9E-47
FGF9_HUMAN	56.25 %	166	9.51E-51
FGF20_HUMAN	59.31 %	174	1.15E-53