Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S545725.g21061.01.t

Possible name(s)

TGFB1; TGFB2; TGFB3

Gene model

Moocci.CG.ELv1_2.S545725.g21061

Location

S545725 [27,206 / 30,330]

Sequences

Amino acid sequence

Length: 238

>Moocci.CG.ELv1_2.S545725.g21061.01.p
MKVTTISCCFFAVIVQFIAHNCVMAGCGINFDKMKKRRLEAIRGQILSKLGLTQLPMDDI
PEIVPPEAEALYNRTREFVEERARQKYEECAESDEDYYAQDVFTVFAKTSKRSVDAPLIT
NTDKYKDRKLTRQVSEFFDFKFAQDPVKAEAITSATLRFYQVENPGSVGGMYQQVELLQL
LPPDRESVGPGKRFLESRRMPTFGSGWKSFDVTSSVIEWIRNPGTETNFICPLSVSVS

Nucleotide sequence

Length: 957

>Moocci.CG.ELv1_2.S545725.g21061.01.t
AGAGGAATTAAGTTTCGTTTCATCGTGTAAAAATTAGTTTGTTGATTCGGCAAGATAAAC
GATACGGAGTTCGTCCTGGGTGGACCACTTCAAGCTTACTCGATCGGAAAGTAAAAGTAT
ACAAAGACTGCAGCTACATTATATGTTTTAATCTAGCTGGGATTAATTTTGACGTGCCTG
GCTGAGAAGAAATTACTCTTCATTGAATCCCTCAACGGATGATAAACGAACAGAACTAAT
ATGAAAGTTACCACGATATCATGCTGCTTTTTTGCAGTCATAGTCCAGTTTATTGCTCAT
AATTGTGTTATGGCAGGATGTGGAATAAATTTCGATAAGATGAAAAAGAGACGCTTAGAG
GCCATCAGAGGACAAATCTTGAGTAAGTTGGGACTGACACAGCTGCCAATGGACGACATT
CCCGAAATTGTTCCTCCGGAGGCTGAGGCTTTATACAACAGAACGCGGGAATTCGTTGAG
GAGAGAGCGCGCCAAAAGTACGAAGAATGTGCGGAGTCGGATGAGGACTATTACGCTCAA
GATGTTTTCACTGTTTTTGCAAAGACTAGCAAAAGATCTGTTGATGCACCTTTGATCACA
AACACCGATAAATACAAAGACAGAAAATTGACACGACAAGTTTCAGAGTTCTTTGATTTT
AAATTTGCCCAGGACCCGGTAAAAGCCGAAGCCATCACATCTGCTACCTTGCGGTTTTAT
CAAGTTGAAAATCCTGGTTCCGTTGGAGGAATGTATCAACAAGTGGAACTTCTACAGCTT
CTACCGCCTGATCGTGAATCTGTAGGTCCCGGGAAACGTTTTTTAGAGTCGCGAAGAATG
CCTACGTTTGGATCCGGTTGGAAGTCGTTTGATGTCACATCTAGCGTTATAGAATGGATT
CGAAATCCAGGTACAGAAACTAATTTTATTTGTCCGTTGTCTGTAAGTGTTTCATAA

InterProScan

PANTHER	TGF-beta-rel (IPR015615) - T[4-226] 1.0E-49
Pfam	TGF-b_propeptide (IPR001111) - T[32-228] 1.1E-20
PRINTS	TGF-beta (IPR016319) - T[63-75] 9.9E-6 - T[170-184] 9.9E-6 - T[207-221] 9.9E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TGFB3_HUMAN	31.429 %	100	8.11E-25
TGFB2_HUMAN	29.258 %	88.6	2.15E-20