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TRANSCRIPT CARD

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  1. Clone 'AHC0AAA92YN13'
  2. Clone 'cign063g09'
  3. Clone 'cigd014o24'
  4. Transcript 'Moocci.CG.ELv1_2.S55...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S559460.g21798.01.t

Possible name(s)

LHCGR; RXFP1; RXFP2

Location

S559460 [8,875 / 10,776]

Sequences

Amino acid sequence

Length: 247

>Moocci.CG.ELv1_2.S559460.g21798.01.p
MGIYLFGIAIKSALVSGSYCSQDLTWRSSSACSFLGVLSSLSSEASISIMVMLTSCRMFT
VVKPHMSYSFPRKFILRIMVACSWLVASVLAFLPLSPLLQNIFIDKISLTSNPFAHLRGI
SLNETRTMIHRMLTYDLNNLTSKEAMQRKILRLVITDFCCWIPITVMAFVQLASGKLPDE
AYPVAAIVLLPINSALNPILYSDFLDKLVRKLSRKKDTEKSSSSTKISKITSNGSTDDFS
KDVQTKL

Nucleotide sequence

Length: 744

>Moocci.CG.ELv1_2.S559460.g21798.01.t
ATGGGTATTTACTTATTTGGAATTGCAATTAAATCTGCTCTGGTTTCCGGCAGTTATTGT
TCGCAAGATTTAACCTGGAGATCGAGCTCAGCATGTTCTTTTCTTGGGGTCTTATCAAGT
CTTTCGAGTGAAGCTTCCATTTCAATTATGGTCATGTTGACTTCTTGCAGAATGTTTACA
GTTGTAAAGCCCCATATGTCGTATTCTTTTCCACGAAAATTCATTCTCAGAATAATGGTT
GCGTGCTCCTGGCTCGTAGCATCTGTACTTGCATTTCTACCGTTAAGTCCACTGTTGCAA
AATATATTCATTGACAAAATATCGCTTACATCCAACCCGTTCGCTCATCTGCGAGGAATT
TCTCTCAATGAAACAAGAACAATGATACATCGAATGCTGACTTATGACTTGAATAATCTT
ACCAGTAAAGAAGCAATGCAAAGAAAGATTCTCCGCCTTGTGATAACTGATTTCTGCTGT
TGGATTCCAATCACTGTGATGGCTTTTGTCCAACTTGCATCTGGAAAACTTCCGGATGAA
GCTTATCCTGTTGCCGCCATTGTTTTGCTTCCCATCAATAGCGCACTTAACCCGATACTT
TATTCTGATTTCTTGGATAAATTGGTGAGGAAGTTATCAAGAAAAAAAGACACAGAAAAA
TCCTCTTCAAGTACAAAAATTTCCAAGATCACAAGCAACGGGTCGACTGATGATTTTTCC
AAAGATGTACAGACTAAACTGTGA

InterProScan

ProSiteProfiles
GPCR_Rhodpsn_7TM (IPR017452) - T[1-201] 9.659
PRINTS
GPCR_Rhodpsn (IPR000276) - T[1-16] 1.3E-7 - T[39-61] 1.3E-7 - T[75-96] 1.3E-7 - T[146-170] 1.3E-7 - T[183-209] 1.3E-7
PANTHER
TSHR/LHCGR/FSHR (IPR034298) - T[1-96] 3.0E-46 - T[138-235] 3.0E-46
Pfam
GPCR_Rhodpsn (IPR000276) - T[141-201] 4.5E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value