- Clone 'cima885071' >
- Transcript 'Phmamm.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C5.98.v2.A...' >
- Transcript 'Moocci.CG.ELv1_2.S56...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S568215.g22341.01.t
Possible name(s)
LNX2; MPDZ; PATJ
Gene model
Location
S568215 [36,771 / 57,462]
Amino acid sequence
Length: 1,981
>Moocci.CG.ELv1_2.S568215.g22341.01.p
MPSKEDLERGAEAVRRLHEELERQGDNKHRDKLQALLSLLESPVFGQILQLQASVKKLKK
KVNEGDFDPENINFLNPPKSDSSSSSEDSEEEEQSIEEFVRKSAQGRETEEIELYKAENE
GLGFSVVGLRSENRGDLGIFVQDIKPDGVADRHGGLKERDQILVIDGQPLAPNISHEAAI
GILQKVKGTVRLVVARGGIPQMQGTQSSISPQVSRTPSAVSSLSQASGILPDTKWAEVET
IELHNDGCGLGFGIVGGQATGGVVVKTIVDGGAAQKNGRLRSGDHILRISDTDVREMSSE
QAAQILRQCGTIVKLVVARGALDDIADRNNDFLENQDHSEGNDANTSSSDEEEKDGALEG
RDMNFFDVVLEKDAKGLGITIAGFVDDDETDDESASRIYVKSVLPGSAASKDGRIRPRDQ
IVAVDGRSLMDPHITSDDAVNVLRSTSKVVKLTIGRPNKPAMDMTTTDMQTETSMSSSSE
SEDEDIKGQETTEAEDEISYSLPLSPDVEDLIKRKWQNLVGNQFTVVVAQIHKFSESSGL
GISLEGTVDMSDHPHHYVRSILHDGPVGINGVLRPGDELLEVNGHPLLGLNHVEVVVVMK
ELPIGVVMVCARPLDALVKAQARDSVVLEEFDGEFQRVPESDIAEETEDQTSQTQTSSSD
EDEAPTATDDRSTPEPVSVVNTDDVRESESSITEAEDTDVHDELPNAAWDDEIHYVELNK
GDRGLGFSILDFQDPIYPDKTALLIRSLVKGGESDMSGKLHPGEKLVSVNQVSLEGSNLQ
TAVTVLKALPKGIVVLGLRKPKSMYKVHAETSDLSTRDEASSDSSDNEADESEQSQNYAD
ESHHIHEPSPVPSPHIQQHPDYTSQSQTEDATTTQPSSSSSSESEEEDDSSKVPSVSSVI
AAFNKGGYHKSESEAAQTSSTEKASTDHGSASYSEVSETETEKADDEAPSSLPVSEDEKR
SDRTMEIKQIPVAGMTAIAITSSSMQRSPREIEPEPQEPQPLYQPPPQQPKTTLPSPKQK
FSAPSWQDSGSHQSRPLPEGGYERTVYIEKGNTSLGVTVSPDKEGDGLIIRSILAGGAIS
RTGEPQVGDIIRRVNSDSAVGLGSTQARSLIRNHSLHSSKVKIVYIPKANIHAFKNGLEP
PMEGSLQSRTSVSSTSSDHESIASMKTKFENKDEVPVKPTQPSYDAKPQPVVQPQAAFHH
VNAPKKRTKSPVNTAWGPVERIEIKRSPGVSLGISIVGGANNNPSSGKPQEIYIKDVIPS
STVGTDGRIKPGDRILKVNETDLVGATHAQAVEAIRSSGKNIVLWVQSYVGEKKQIVEPA
RSTPVDPRQKYANFDGQIIVVDLEKGPKGLGLSLAGNKDEQNQGIFVVGINPDGAAGRDG
RIQVGDEICEINGVSLNSPNNHQTAISVISAAKSTLQIVLLRSSNRQATPEPEQGYEKPQ
ADVKVIKLVKDFQGLGFAIKETPRGIVVQSLAAGGTADRDGQLKKGDYILAVNDHILKDV
SYEMAINILKSTKGVVSLTVAPSPQTIDSEEEDALTCPIVDGREVTIEIIKGKSGLGLSI
VGGSDSLLNSILVHTVYDNGAAAKDGRLWPGDQILKVNNKDLHNATHEEAIEALRHTPSR
VRLTVLRDTSRDSVGINDDPMDYIDVVLEKPPGRGLGLTIVGKRDDVGVFVSDVLQGGVA
YSEGTIRKGDQIVEVDGISIEHSSQKDAAMVLKNIGDTVQLRMGRAKVNSGGAVTSLFSP
PATLEREKSNNSSSLTTADDKDVKFIEIEKSPTQPLGISISGGIGSPLGNVPIFVAMVQN
HGAATNKLKVGDKILSINGQSTEFKTHDEVVQMLRGPEDAIVLMKVQEGGEDIKRLTDYL
SETANAMNKMMLEENSTESEMLNKNANQNVDLSKCIDLLLYRGNEGFGFTIVGGFGSTYG
DLPIFVKSISPTGPAAENGKLKKGDRIVSVNGELLTNATHDEALQVLKSAKGRVMLRIMP
A
Nucleotide sequence
Length: 6,661
>Moocci.CG.ELv1_2.S568215.g22341.01.t
ATTTGTTTTTTAAAGATTTATTTTAGATTTTGAATAGTTGTACAAACTTTAATCTTTGCT
TGTAATGCCTTCGAAGGAAGATTTAGAACGTGGTGCAGAAGCTGTCAGGAGATTGCACGA
AGAATTGGAACGACAAGGAGACAACAAGCATAGAGATAAATTACAAGCCTTGTTATCACT
TCTTGAAAGTCCTGTATTTGGCCAAATTCTTCAGTTACAGGCTTCAGTTAAAAAATTAAA
GAAAAAGGTAAATGAAGGTGACTTTGACCCTGAGAATATTAACTTCTTGAATCCACCAAA
AAGTGATTCTTCTTCATCATCAGAAGATTCAGAGGAGGAAGAACAAAGCATTGAAGAGTT
TGTAAGAAAGTCAGCTCAAGGCAGAGAAACCGAAGAAATAGAATTATACAAAGCTGAAAA
TGAGGGATTGGGGTTTAGTGTTGTAGGTCTTCGATCAGAAAATCGTGGTGATCTTGGCAT
ATTTGTTCAAGATATTAAACCTGATGGTGTGGCTGATCGACATGGCGGCCTTAAGGAAAG
AGACCAAATATTAGTTATTGATGGACAGCCGCTTGCTCCTAACATCTCACATGAAGCAGC
TATCGGTATTTTACAGAAAGTTAAAGGTACTGTTAGATTGGTAGTTGCTCGCGGTGGAAT
CCCACAAATGCAAGGAACTCAATCTTCCATCAGTCCCCAAGTTTCAAGAACTCCATCTGC
TGTTAGCTCTTTATCACAAGCTTCTGGGATACTTCCTGATACTAAATGGGCAGAAGTAGA
AACAATAGAACTTCACAATGATGGATGTGGACTGGGATTTGGCATTGTTGGTGGTCAAGC
AACAGGGGGTGTAGTTGTAAAAACCATTGTTGATGGCGGGGCAGCTCAAAAAAATGGAAG
GCTAAGATCTGGGGATCATATTTTGCGAATTAGTGATACTGATGTTAGAGAAATGAGTTC
TGAACAAGCTGCACAGATTTTGAGACAATGTGGAACTATTGTCAAACTTGTAGTTGCAAG
AGGAGCTTTAGATGACATTGCTGATCGAAATAATGATTTCCTTGAAAATCAGGATCATTC
TGAAGGCAATGATGCAAATACATCAAGTTCAGATGAAGAAGAAAAGGATGGAGCATTGGA
AGGGAGGGATATGAACTTCTTTGATGTTGTACTAGAGAAAGATGCCAAAGGATTAGGAAT
AACAATTGCTGGATTTGTGGATGATGATGAAACTGATGACGAATCTGCCTCTCGTATTTA
TGTGAAAAGTGTTCTACCTGGATCAGCTGCAAGTAAGGATGGAAGAATTCGCCCCAGAGA
TCAAATAGTTGCAGTTGACGGTCGATCATTAATGGATCCACATATTACAAGTGATGATGC
AGTAAATGTTTTGAGATCAACAAGCAAAGTTGTAAAACTAACTATAGGTCGTCCTAATAA
ACCCGCTATGGACATGACAACTACCGATATGCAAACAGAAACTTCTATGTCTAGCAGTAG
TGAATCTGAAGATGAAGACATAAAGGGCCAAGAAACAACAGAAGCAGAAGATGAAATAAG
TTATAGTCTACCTCTTTCCCCTGATGTTGAAGATCTAATCAAGCGAAAATGGCAAAACTT
GGTTGGGAATCAGTTTACAGTAGTGGTGGCACAAATTCACAAGTTCAGTGAGTCAAGTGG
ATTGGGGATAAGTTTGGAGGGTACAGTTGATATGAGTGATCACCCCCACCACTATGTAAG
ATCAATTCTACATGATGGTCCAGTTGGTATAAATGGAGTATTGCGGCCAGGAGATGAACT
ACTTGAAGTAAATGGACACCCATTGTTAGGACTTAACCATGTCGAGGTTGTTGTTGTGAT
GAAAGAATTACCGATTGGAGTAGTAATGGTTTGTGCCCGCCCACTAGATGCACTCGTCAA
AGCACAGGCGCGTGACTCTGTTGTTCTTGAGGAATTTGATGGTGAATTTCAACGTGTCCC
AGAAAGTGATATTGCAGAAGAAACAGAAGACCAAACTTCCCAAACTCAAACATCTTCCAG
TGATGAAGATGAAGCACCAACAGCAACTGATGATCGGAGCACTCCTGAGCCTGTATCTGT
AGTAAACACGGATGATGTTCGGGAATCTGAAAGTAGCATTACTGAGGCTGAAGATACTGA
TGTGCATGATGAATTACCAAATGCGGCATGGGATGATGAAATACATTATGTAGAATTAAA
CAAAGGTGATCGAGGTTTAGGATTCAGTATCTTAGATTTTCAGGACCCAATTTATCCAGA
CAAAACTGCATTATTAATCCGGTCTTTGGTGAAAGGCGGGGAATCTGACATGAGTGGAAA
ACTTCATCCTGGTGAAAAACTGGTATCTGTCAACCAAGTTTCGTTGGAAGGTTCCAACTT
GCAAACAGCTGTTACAGTTTTAAAAGCATTGCCCAAGGGAATTGTTGTGTTAGGGTTGAG
AAAGCCAAAATCAATGTACAAAGTTCATGCAGAAACATCTGATCTTAGCACAAGAGATGA
GGCAAGCTCGGACAGTTCTGATAATGAAGCTGATGAATCTGAGCAAAGCCAAAATTATGC
AGATGAAAGCCATCACATCCATGAGCCATCACCCGTACCTTCCCCCCACATACAACAACA
TCCTGACTACACCTCCCAATCACAGACTGAAGATGCAACTACAACTCAACCATCTTCTTC
TTCATCATCTGAATCTGAAGAAGAGGATGACAGCAGCAAAGTGCCTTCGGTGTCATCAGT
GATAGCTGCATTTAACAAAGGAGGATATCACAAATCAGAGAGTGAGGCGGCGCAAACTTC
TTCAACTGAGAAAGCATCTACAGACCATGGCTCAGCTTCATACTCCGAAGTTTCAGAAAC
AGAAACGGAGAAAGCTGATGATGAAGCACCTTCATCCCTACCTGTTAGTGAAGATGAAAA
GCGCTCAGACAGAACAATGGAAATTAAGCAAATTCCAGTTGCGGGAATGACAGCTATCGC
AATTACATCGTCCTCTATGCAACGTTCACCACGAGAGATTGAGCCTGAACCTCAGGAACC
CCAGCCTCTATACCAACCCCCTCCACAACAACCTAAAACAACTCTACCATCCCCAAAGCA
AAAGTTTTCTGCACCATCGTGGCAGGACTCGGGATCACATCAAAGCAGACCCCTACCAGA
GGGTGGCTATGAAAGAACTGTTTATATTGAAAAAGGGAACACTAGTTTAGGGGTAACTGT
AAGTCCAGACAAAGAAGGGGATGGTCTTATCATTCGGTCCATTCTAGCTGGTGGAGCAAT
TTCCCGAACTGGGGAGCCACAAGTGGGCGATATAATCCGAAGGGTCAATAGTGATTCGGC
TGTTGGACTTGGCTCAACTCAGGCTCGTTCACTGATTAGAAATCATTCTTTGCATAGCAG
TAAAGTCAAGATTGTCTACATACCTAAAGCCAACATTCATGCTTTTAAAAACGGACTTGA
ACCGCCAATGGAAGGAAGTTTGCAGTCACGGACTTCTGTATCCAGCACATCTTCCGACCA
CGAGAGCATAGCTTCCATGAAAACAAAGTTTGAAAACAAAGATGAAGTTCCGGTTAAACC
GACACAACCAAGCTATGATGCAAAGCCCCAACCTGTTGTTCAACCCCAAGCAGCCTTTCA
CCATGTTAACGCTCCAAAGAAGAGGACTAAATCACCTGTCAACACAGCTTGGGGTCCAGT
GGAAAGAATTGAAATTAAACGTTCTCCGGGAGTTTCATTAGGAATAAGTATAGTAGGTGG
AGCCAACAACAATCCATCATCCGGAAAACCACAGGAAATCTACATTAAAGATGTCATTCC
TTCAAGTACAGTTGGTACAGATGGAAGAATTAAACCTGGTGATCGGATTCTTAAGGTAAA
CGAAACTGACTTGGTGGGAGCGACTCATGCCCAAGCAGTTGAAGCGATCCGTAGTTCAGG
GAAAAACATTGTTCTGTGGGTTCAATCTTATGTGGGTGAGAAAAAGCAAATTGTTGAACC
TGCCAGATCAACCCCAGTTGATCCTCGTCAAAAATATGCAAACTTTGATGGCCAAATTAT
TGTTGTTGATTTGGAGAAAGGACCAAAAGGCTTGGGTTTAAGTCTTGCTGGAAATAAGGA
CGAACAAAACCAGGGAATATTTGTGGTTGGCATTAACCCCGATGGCGCAGCTGGTAGAGA
CGGTCGGATTCAAGTTGGCGATGAAATTTGTGAAATCAATGGAGTGTCGCTTAACAGTCC
AAATAATCATCAAACAGCAATATCTGTTATTTCAGCTGCAAAATCTACTTTACAGATTGT
CCTTTTAAGGTCTTCTAACAGACAGGCAACGCCAGAACCTGAACAAGGCTACGAAAAACC
GCAGGCGGATGTAAAGGTCATCAAATTAGTCAAGGATTTCCAAGGTCTTGGATTTGCAAT
TAAAGAAACGCCAAGGGGGATAGTTGTCCAGTCATTAGCAGCAGGTGGAACAGCTGACCG
AGATGGACAATTAAAAAAGGGGGATTACATACTTGCTGTAAACGACCATATTTTAAAGGA
CGTTTCATATGAAATGGCCATCAATATTTTGAAAAGTACAAAGGGTGTTGTGTCACTTAC
AGTGGCTCCAAGTCCACAGACCATTGATTCAGAGGAGGAAGATGCACTGACTTGTCCCAT
CGTTGATGGGAGAGAAGTTACAATTGAGATAATTAAGGGGAAGTCTGGTTTGGGTCTAAG
TATTGTTGGTGGATCAGATAGTTTGTTGAATTCAATATTGGTGCACACTGTTTATGACAA
CGGTGCAGCGGCCAAAGATGGCAGATTGTGGCCAGGGGATCAAATATTGAAAGTAAACAA
CAAAGATTTGCATAACGCAACACATGAGGAAGCGATAGAGGCATTACGACACACACCAAG
TCGAGTGCGATTGACTGTGCTTAGAGATACTAGCAGGGATTCAGTAGGTATTAATGATGA
CCCTATGGATTATATCGACGTTGTTCTGGAAAAACCACCTGGTCGTGGATTGGGATTAAC
AATAGTCGGAAAAAGAGACGATGTTGGTGTGTTTGTAAGCGATGTTTTGCAAGGAGGTGT
TGCATATTCTGAAGGTACAATACGGAAAGGAGATCAAATAGTAGAGGTTGACGGAATCAG
CATCGAACATTCAAGCCAAAAAGACGCTGCCATGGTGCTCAAGAACATTGGTGATACAGT
TCAACTTAGAATGGGAAGAGCTAAAGTAAATTCAGGAGGAGCTGTAACTTCTCTCTTTAG
TCCTCCAGCCACTCTAGAAAGAGAAAAGAGTAATAATTCCTCCTCGCTGACAACTGCCGA
TGATAAAGATGTCAAATTCATAGAAATAGAAAAGTCTCCTACACAGCCACTTGGTATCAG
CATATCTGGAGGAATAGGATCACCACTCGGTAATGTGCCTATATTTGTAGCCATGGTGCA
AAATCATGGTGCAGCCACCAACAAATTAAAAGTCGGTGACAAAATTCTCAGCATAAATGG
CCAGTCGACTGAGTTCAAAACCCATGACGAGGTTGTGCAGATGCTTCGTGGACCTGAAGA
CGCCATTGTTCTTATGAAGGTTCAAGAAGGAGGGGAAGACATCAAACGATTGACTGATTA
TCTGTCAGAGACTGCCAACGCTATGAATAAGATGATGCTGGAAGAGAATTCAACTGAGTC
TGAGATGTTGAATAAAAACGCTAACCAAAATGTCGACTTATCCAAGTGTATTGATCTACT
TCTCTACCGTGGAAACGAAGGATTCGGCTTTACAATAGTTGGTGGTTTTGGATCAACATA
CGGTGATCTTCCTATCTTTGTCAAATCCATCTCACCTACCGGTCCTGCGGCTGAAAACGG
AAAGTTAAAGAAGGGTGACAGAATTGTTTCTGTTAATGGTGAGTTATTGACAAATGCGAC
ACATGACGAAGCATTGCAAGTTTTAAAATCTGCAAAAGGACGAGTTATGCTCCGGATTAT
GCCAGCTTAATTCAATAATGCTATTAATTACCGGTACAAATGCAAATTATCACAACTAAC
ATTCATATATATTTTTATGGTTATCTATTTTATACTGCTAGTTAATTTTTTCGTTTAATT
TTTATTAAAAATTTGTTAATGTGTGTTTAAGAATTTATGGTGCAACACATATCATTCACT
TTTGTGAATAGTTTACTTTCCTTTTTTTGTTTTAACATCATGTTTGAAGCAATATATTTC
ATTTCCATTAGTTTTTTTAGCCTTATATTTTAGCCTTATATTTATAACTTATATTTTCCT
TGGGTTTTCAAATATTTAATCACTATTGCAGTTTATTGTAATTTTTTTTTTTCGAAACCG
CAGTTTCAGTAAATGTTATTTGCAGTTGTGTTTTCTTAAAGTTTGTATGCCAAAAGACTT
TGATCTATCTACCCTAACTTTTAATTTAAATTAGATTTGATATTTTTAGCAAAATATATT
TTAACATCTCCTTATTCGTTAAAATTATGTTTTCTTTTTATATATTTTACAACTCTTTGA
GTACAGTGGTGTACTAGTTGTACTAATTGCTACAGGCCTACAGTCATATTATAGTTGTTT
TAATTCACATTTTTAAAAATTTTAAACTGTTTTTAAACATATTTTCACTTTTATGATTTT
A
| SUPERFAMILY |
L27_dom_sf (IPR036892) - T[6-62] 7.06E-11 |
| Pfam |
L27_2 (IPR015132) - T[6-63] 3.1E-10 |
| ProSiteProfiles |
L27_dom (IPR004172) - T[7-63] 11.353 |
| SUPERFAMILY |
PDZ_sf (IPR036034) - T[84-201] 6.05E-22 - T[212-320] 7.36E-25 - T[362-462] 2.89E-21 - T[528-615] 4.07E-19 - T[705-802] 2.5E-17 - T[1019-1128] 4.34E-13 - T[1214-1311] 4.6E-22 - T[1327-1427] 5.92E-21 - T[1437-1525] 8.81E-21 - T[1535-1629] 3.29E-27 - T[1643-1725] 6.57E-21 - T[1757-1853] 1.25E-20 - T[1886-1980] 3.94E-26 |
| ProSiteProfiles |
PDZ (IPR001478) - T[111-198] 20.385 - T[240-321] 19.983 - T[367-458] 20.104 - T[528-614] 15.441 - T[715-801] 15.662 - T[1045-1113] 12.828 - T[1221-1310] 19.722 - T[1340-1424] 19.983 - T[1445-1524] 18.858 - T[1546-1629] 22.536 - T[1645-1727] 20.707 - T[1765-1849] 17.551 - T[1897-1981] 21.792 |
| Pfam |
PDZ (IPR001478) - T[112-194] 6.3E-13 - T[246-317] 3.4E-14 - T[369-454] 3.8E-13 - T[533-602] 3.0E-8 - T[1222-1305] 1.7E-14 - T[1341-1420] 4.8E-14 - T[1453-1520] 6.1E-12 - T[1547-1626] 1.9E-16 - T[1646-1721] 2.1E-14 - T[1767-1845] 5.4E-15 - T[1901-1979] 6.8E-18 |
| SMART |
PDZ (IPR001478) - T[120-198] 3.7E-19 - T[248-321] 3.7E-19 - T[375-458] 2.1E-20 - T[538-614] 4.7E-15 - T[723-802] 1.4E-9 - T[1053-1129] 1.5E-4 - T[1230-1310] 3.2E-16 - T[1348-1424] 1.1E-17 - T[1453-1524] 1.0E-17 - T[1554-1629] 7.5E-22 - T[1654-1727] 1.5E-17 - T[1774-1850] 2.4E-14 - T[1905-1980] 8.6E-19 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MPDZ_HUMAN | 42.503 % | 542 | 7.9E-160 |
| INADL_HUMAN | 36.301 % | 432 | 4.68E-124 |
| LNX2_HUMAN | 31.692 % | 201 | 9.75E-54 |