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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S57...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S573984.g22657.01.t

Possible name(s)

NKX6-1; NKX6-2; NKX6-3

Location

S573984 [42,482 / 46,038]

Sequences

Amino acid sequence

Length: 283

>Moocci.CG.ELv1_2.S573984.g22657.01.p
MDSSAASSAFLFNSNHVAAAMSALQAASSGFTEPRLTSQGYHSYPSFQCASGSQNLQKSL
NSPNSGTPFGINDILNRPSTSSDVSSNSSSPPSANSSNTPVGYFPGPHVPVTSPGAAIAA
AAAMYLGGGSMGATSAVPGTMLSQSHMGRFSKPLAELPGRSPIYWPGVLQKDWQEKFSCQ
VPYNKMADKIRFTATKMSLVRLGFSYYRVHHSVVITVGSHLSSSLTTHPGLIVDKFGKKK
HTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSFVVFDSKK

Nucleotide sequence

Length: 852

>Moocci.CG.ELv1_2.S573984.g22657.01.t
ATGGATAGCTCAGCCGCTTCGAGCGCTTTTTTGTTCAACAGTAATCATGTGGCTGCTGCC
ATGTCCGCTTTACAAGCCGCGTCCAGTGGATTTACCGAGCCGAGGCTGACGTCACAAGGT
TATCATTCTTATCCATCATTTCAGTGCGCTTCCGGGAGTCAAAATCTGCAGAAATCACTA
AATAGTCCGAATTCTGGGACTCCATTTGGAATAAACGACATTTTAAATCGACCCAGCACT
TCAAGCGACGTTTCGTCAAATAGTTCCAGCCCGCCCAGCGCAAATAGTTCTAATACCCCC
GTTGGATATTTCCCTGGACCCCACGTGCCTGTGACGTCACCGGGGGCAGCAATAGCGGCC
GCAGCAGCCATGTACTTAGGAGGAGGGTCAATGGGAGCAACATCTGCCGTTCCCGGGACC
ATGCTGAGTCAAAGTCACATGGGGCGGTTTTCAAAACCCTTGGCTGAACTTCCCGGTCGC
TCGCCCATCTACTGGCCAGGAGTATTGCAAAAAGATTGGCAGGAAAAGTTCTCTTGTCAA
GTACCGTATAACAAAATGGCGGATAAGATACGATTTACAGCGACGAAAATGTCGCTCGTT
CGGTTGGGATTTTCATATTATCGCGTGCATCATAGCGTTGTTATTACGGTGGGATCGCAT
TTATCGTCTAGTTTAACGACGCACCCAGGTTTGATTGTGGATAAATTTGGAAAGAAAAAA
CACACGCGCCCAACTTTTTCCGGCCAACAAATTTTTGCACTTGAAAAAACTTTTGAACAG
ACGAAATATCTGGCAGGTCCTGAAAGAGCGAGATTGGCGTATTCTTTCGTCGTATTTGAT
TCCAAAAAATAG

InterProScan

SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[223-274] 2.1E-7
Pfam
Homeobox_dom (IPR001356) - T[240-274] 2.3E-5
CDD
Homeobox_dom (IPR001356) - T[240-273] 1.26588E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
NKX62_HUMAN 35.16 % 107 1.99E-27
NKX61_HUMAN 46.377 % 115 4.63E-30
NKX63_HUMAN 72.222 % 83.2 9.31E-19