Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S576621.g22807.01.t

Possible name(s)

ZFP36; ZFP36L1; ZFP36L2

Gene model

Moocci.CG.ELv1_2.S576621.g22807

Location

S576621 [24,900 / 25,680]

Sequences

Amino acid sequence

Length: 260

>Moocci.CG.ELv1_2.S576621.g22807.01.p
YKTELCRPFEENGKCKYSDKCQFAHGKHELRSLVRHPKYKTELCRTFHTSGFCPYGPRCH
FIHNTEDGSTNRQGNPQNNDFSQNNYGQTVPVPTPQGSVANHYQNSRPAQLELIGKQYST
DSGLGGYGQSYSPNSNSPLGTSPITDILGSTGLISPLSPASNGNRFSFNNNYPQTDISGF
RQNSISSNMLYGQPDASPPNSTFELLKQISNSVAYETNDEAVFEGPPTPPDSDRESMTGS
PSNRSPTQRLPIFRCLSHSD

Nucleotide sequence

Length: 780

>Moocci.CG.ELv1_2.S576621.g22807.01.t
TACAAGACAGAATTGTGTCGCCCGTTTGAAGAAAATGGTAAATGCAAATACAGCGACAAA
TGTCAATTCGCGCACGGCAAACATGAGCTACGCAGTTTGGTAAGGCATCCTAAATATAAG
ACGGAATTGTGTCGTACATTTCACACAAGTGGATTCTGCCCTTATGGTCCGCGTTGTCAT
TTTATTCACAACACTGAGGATGGCAGTACCAACAGACAAGGAAATCCACAAAACAACGAT
TTCTCGCAAAACAACTATGGACAAACTGTTCCTGTTCCTACACCACAGGGATCTGTAGCT
AACCATTACCAAAACTCTCGACCTGCACAACTGGAATTAATCGGAAAACAATACAGCACT
GACAGTGGCCTTGGAGGATACGGTCAATCATATTCACCAAACAGCAATAGTCCTCTTGGT
ACCTCCCCCATCACAGATATTCTTGGCAGTACTGGATTAATCTCCCCCCTTTCCCCTGCG
TCCAATGGCAATCGATTTTCGTTTAACAACAACTACCCCCAAACCGACATTTCTGGATTT
CGACAAAATAGCATCTCTTCAAATATGTTGTACGGACAACCTGACGCTTCGCCACCAAAC
TCCACTTTTGAACTTCTGAAACAAATATCAAACTCGGTCGCATATGAAACCAACGATGAG
GCAGTATTCGAAGGTCCACCAACACCACCAGATTCCGACCGGGAATCGATGACAGGGTCA
CCTTCAAATCGTTCCCCGACGCAGAGGCTTCCGATTTTCCGATGTCTCTCGCACTCTGAT

InterProScan

SUPERFAMILY	Znf_CCCH_sf (IPR036855) - T[1-31] 4.19E-9 - T[34-66] 1.28E-10
ProSiteProfiles	Znf_CCCH (IPR000571) - T[1-28] 15.281 - T[38-66] 15.948
Pfam	Znf_CCCH (IPR000571) - T[1-27] 4.0E-10 - T[39-64] 6.9E-11
SMART	Znf_CCCH (IPR000571) - T[1-27] 9.3E-6 - T[38-65] 1.4E-8

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
TISB_HUMAN	89.552 %	142	1.17E-40
TISD_HUMAN	85.075 %	135	7.76E-37
TTP_HUMAN	69.118 %	105	8.55E-27