Login
Help

Submit your Data

  1. Transcript 'Moocul.CG.ELv1_2.S12...'
  2. Clone 'cign031l14'
  3. Region 'REG00000643'
  4. Transcript 'KH2012:KH.C1.1027.v1...'
  5. Transcript 'Moocci.CG.ELv1_2.S57...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S577486.g22859.01.t

Possible name(s)

PAX2; PAX5; PAX6

Location

S577486 [11,998 / 17,209]

Sequences

Amino acid sequence

Length: 240

>Moocci.CG.ELv1_2.S577486.g22859.01.p
MTAQSLYHQSHMAAHLSHYPASSYSSPVALCLNRDSLPHKDYDETNSDNNNNFVQVGHSG
INQLGGMFVNGRPLPDTTRQRIVELAHNGARPCDISRILQVSNGCVSKILARYYETGTIR
PRAIGGSKPRVATPEVVARIALFKQECPSIFAWEIRDRLLNEKICNSENIPSVSSINRVL
RNFANDKLNGFDFTNGIKQATGDWSAENNWYNGNNGIGSSKDSDESYCSASNVVIIDFDF

Nucleotide sequence

Length: 723

>Moocci.CG.ELv1_2.S577486.g22859.01.t
ATGACAGCCCAGTCTCTTTATCATCAAAGCCACATGGCCGCGCATTTAAGTCATTACCCA
GCAAGCAGTTACTCTTCTCCGGTAGCTTTGTGTTTGAACAGGGATAGTTTACCTCACAAA
GATTATGATGAAACAAACAGTGATAACAATAACAACTTTGTTCAAGTAGGTCACAGTGGC
ATCAATCAACTCGGTGGTATGTTTGTAAACGGGCGCCCTCTACCGGACACAACTCGCCAG
CGCATCGTAGAGCTTGCGCATAACGGAGCTCGCCCTTGTGACATCTCGAGGATTTTACAA
GTATCAAATGGATGCGTCAGCAAGATATTAGCGAGGTATTACGAAACCGGAACCATTCGA
CCAAGAGCCATAGGTGGCAGCAAGCCCAGAGTAGCCACGCCCGAAGTTGTGGCTAGGATA
GCTCTTTTCAAGCAAGAATGTCCCAGTATTTTTGCATGGGAGATCAGAGATAGGTTGCTG
AATGAAAAGATCTGCAATTCAGAAAATATCCCCAGTGTGTCATCCATCAACAGAGTGCTT
AGAAATTTTGCCAACGACAAATTAAACGGTTTTGACTTTACCAATGGAATAAAACAAGCG
ACCGGTGATTGGTCGGCAGAGAACAATTGGTACAATGGAAACAATGGGATTGGTTCGTCA
AAAGATAGCGACGAATCCTATTGTTCGGCTTCGAATGTTGTAATCATCGACTTTGATTTT
TAG

InterProScan

Gene3D
WH-like_DNA-bd_sf (IPR036388) - T[49-125] 1.5E-41 - T[126-189] 1.2E-31
SMART
Paired_dom (IPR001523) - T[57-181] 1.8E-87
ProSiteProfiles
Paired_dom (IPR001523) - T[57-183] 62.395
CDD
Paired_dom (IPR001523) - T[57-184] 1.66842E-82
Pfam
Paired_dom (IPR001523) - T[57-181] 3.3E-67
SUPERFAMILY
Homeobox-like_sf (IPR009057) - T[59-182] 7.53E-38
PRINTS
Paired_dom (IPR001523) - T[61-76] 9.2E-43 - T[79-97] 9.2E-43 - T[99-116] 9.2E-43 - T[117-134] 9.2E-43
ProSitePatterns
Paired_dom (IPR001523) - T[91-107] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PAX5_HUMAN 66.667 % 206 6.66E-65
PAX2_HUMAN 71.429 % 203 1.43E-63
PAX6_HUMAN 69.412 % 252 2.19E-82





By clicking "SEND", you accept the terms of our Privacy Policy.