- Transcript 'Moocci.CG.ELv1_2.S57...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S578361.g22947.03.t
Possible name(s)
SGSM1; SGSM2; TBC1D15
Gene model
Location
S578361 [5,768 / 23,324]
Amino acid sequence
Length: 1,060
>Moocci.CG.ELv1_2.S578361.g22947.03.p
MGSAENVEDNHAEMVRCIKCQVKAIMEEAVTKKFVHEESSHVIRLCGTINSCMISKLKKR
YSGFLKTNKVANLFNNIGKTVPAVAELVVKIEEALEADAQSQRRLENTDFTKPLRQPHHL
KFFWVRMALTEKLLDKILDNLVQNSRKYYEKSAILADPVNGPLIASIMVGPCALDYTKMK
TTDHYWSDPPADELMQRQRLHSRNSSPNSPGKRPTLHMRYFNSDSMNGEKILHDENMLAA
SSFRDYVESLHQNSKTTLLYGKNNVVVQPKEDIGPIPGYLSLHQDVGSIFIKWTPNQLMN
NNNNPSNGHLHKQSAHYVDENRSYWKFIMSINIRDVVYLHCHQQQDKSGTVVFVGQDGVQ
HPPICFPPGGHLLAFLTCLEAALLPRGHLDPPLRSQRGKGKVFPRIRNGGSTSSSGSQIS
TGSQFSQSEIEEPTDFVFRVTLGNDSPVPHAVDTYNPLSTHHEFTFEHTNGSADIETARN
RHANSTVYSNTSLKTLCDTMKRQIISRAFYGWLGYSRQLSAVRTHLSALVNDEITQPCQP
VNATVGVTKETWEQHLYNGKITNIKELMRHVYFGGIDHDMRKTVWPFLLKHYPMDSTVDE
RNNLDLQTKINYEEIMTEWLAVEVIVKQREREAVNLAKLSTGGTASTSSTSSFDHHRKQS
TGTINEVFVSLDKDPPLSTVNSINEEEKAIHSSSPDYSEYYIIKNEKSQPVNIGHRRKRT
LLDMSTKSHTPYSSVSTDLTVSEDIVSSSLPSVTENSSSTDRRYLNKSNAAVNFKKSMNK
HLRKQAIVESLDEASHEEEDTGFDSAADDVSMSSSSTEESVSSVQGFTYSSELLDDFGLN
LHRIEKDVHRCDRNHIYFTVEGNLDKLRNVMCSYVWKNLSVGYMQGMCDIAAPLLIIFDD
ESKVYSCFTHLMKRMGVNFPNGGAMDTHLANVRSLLQVLDPELYEHMHQNGDYTHFYFCY
RWFLLDFKRELSYKDDVFAVWERIWSAEYCSSNHFGIFFALAMLNNYRNIILDNDMDFTD
IIKFFNEMAERHDAKKIIKLAQNFVSDVQLMIHNRKVTIM
Nucleotide sequence
Length: 3,355
>Moocci.CG.ELv1_2.S578361.g22947.03.t
TTGTTTTAAAAGATTTACTTATTTTAATACTAATTTCCCTTCTAGCAGTCTAGATACTGC
TACGAGAAACCTAATGTAATACCGGTCAGCCGGTACTGGTACGCTCACTAATTTGCTACT
TGAGGCAAACTGGCGGACGTCCGACAGTCCGACCAATTTCTAAAAGTTAAACATGGGTTC
CGCAGAAAACGTGGAAGATAACCATGCGGAAATGGTGCGGTGTATAAAGTGTCAAGTAAA
AGCTATAATGGAAGAGGCGGTTACTAAAAAATTTGTTCACGAAGAAAGCTCACATGTTAT
ACGTTTATGTGGAACTATCAATTCATGCATGATAAGCAAATTAAAAAAACGATATAGTGG
ATTTCTAAAAACGAATAAAGTTGCGAACTTGTTTAACAACATAGGTAAAACAGTACCTGC
TGTTGCTGAACTTGTTGTAAAAATTGAGGAAGCTTTGGAAGCGGATGCACAAAGCCAAAG
GCGTTTGGAAAATACTGATTTTACCAAACCATTACGCCAACCACATCACTTAAAGTTTTT
TTGGGTGAGAATGGCATTAACTGAAAAACTGTTGGATAAGATCTTGGATAATTTAGTGCA
AAATTCAAGAAAATACTACGAAAAATCAGCAATATTAGCAGACCCTGTAAATGGCCCACT
AATTGCATCAATTATGGTGGGGCCATGTGCATTGGACTACACCAAAATGAAAACTACAGA
TCATTACTGGTCAGATCCACCTGCTGATGAGCTTATGCAAAGACAAAGACTACATTCAAG
GAATTCTTCCCCAAATTCTCCTGGCAAAAGACCAACTTTACACATGCGTTATTTTAATTC
TGATTCAATGAATGGAGAAAAGATTTTGCATGATGAAAATATGCTTGCTGCCTCATCATT
TAGGGATTATGTTGAGTCTCTTCATCAAAATTCTAAAACCACCTTGTTATATGGAAAAAA
TAATGTGGTTGTGCAGCCGAAAGAAGATATAGGTCCAATTCCTGGTTACCTTTCTCTACA
CCAAGATGTTGGATCTATATTTATAAAATGGACACCGAACCAACTCATGAACAATAACAA
TAACCCAAGTAATGGGCATTTACACAAACAATCTGCACACTATGTTGATGAAAACAGATC
TTACTGGAAATTTATTATGAGCATAAATATTCGGGATGTGGTTTATCTACATTGTCATCA
GCAACAGGACAAAAGCGGCACAGTAGTTTTTGTTGGTCAGGATGGCGTCCAACACCCCCC
CATATGTTTTCCTCCTGGTGGTCATCTTTTAGCTTTTCTAACATGCTTGGAAGCAGCACT
TCTACCAAGAGGACACCTGGACCCACCATTAAGATCACAACGTGGAAAGGGCAAAGTTTT
TCCACGAATTCGAAATGGTGGTAGTACCAGTAGTTCTGGCAGTCAAATAAGTACTGGTAG
CCAGTTTAGCCAGTCAGAAATTGAAGAACCAACGGACTTTGTGTTTCGAGTCACTCTGGG
AAATGATTCCCCTGTTCCTCATGCAGTCGATACATATAACCCTTTGTCAACTCATCATGA
GTTTACGTTTGAGCATACAAATGGGTCTGCTGATATAGAAACAGCAAGAAACAGACATGC
TAACTCAACTGTTTATTCGAATACATCGTTAAAAACCCTTTGTGACACAATGAAACGACA
AATAATATCTCGTGCTTTCTATGGTTGGCTTGGCTACTCTCGACAATTATCAGCTGTAAG
AACACATTTATCGGCATTAGTTAACGATGAAATCACTCAACCATGCCAACCCGTCAATGC
CACTGTTGGAGTTACCAAGGAAACATGGGAACAACATTTATATAATGGAAAGATAACAAA
TATTAAGGAGTTAATGAGGCATGTATATTTTGGGGGCATTGATCATGACATGCGGAAAAC
AGTTTGGCCGTTTTTACTAAAGCATTACCCAATGGATTCGACTGTTGATGAAAGAAATAA
TCTGGATTTGCAGACTAAAATTAATTATGAAGAAATAATGACAGAATGGTTGGCTGTTGA
GGTCATTGTAAAACAGCGTGAACGTGAAGCAGTGAACCTTGCAAAATTGTCAACTGGGGG
AACAGCAAGCACCAGCTCAACTTCGAGTTTTGATCACCACCGAAAACAGTCAACTGGGAC
AATAAACGAAGTTTTTGTTTCACTTGATAAAGATCCCCCTTTGTCAACTGTAAATTCTAT
AAATGAAGAAGAAAAGGCAATCCACTCGAGCTCTCCAGATTATTCAGAATATTATATTAT
AAAAAATGAAAAATCTCAACCAGTTAATATTGGCCATCGCAGAAAAAGAACTTTGTTAGA
TATGTCAACTAAAAGCCACACCCCATACTCTTCCGTTAGTACAGATTTAACAGTTAGTGA
GGATATTGTGTCGAGTTCATTGCCAAGTGTAACTGAAAATTCTTCAAGTACTGATCGACG
ATATTTAAATAAGTCTAATGCAGCTGTGAATTTCAAAAAGAGTATGAATAAGCATTTACG
AAAACAAGCCATTGTAGAAAGTCTGGACGAAGCATCACACGAAGAAGAAGACACTGGTTT
TGATTCAGCAGCAGATGATGTCAGCATGAGCAGTAGCTCAACGGAAGAATCAGTTTCATC
AGTTCAAGGTTTTACTTATTCCTCTGAATTGTTGGATGACTTTGGCCTGAATCTTCACCG
CATTGAGAAAGATGTACATCGATGCGATCGGAACCACATTTACTTTACGGTTGAAGGAAA
TCTTGACAAACTGCGGAATGTTATGTGCAGTTATGTTTGGAAAAATCTTAGTGTTGGATA
CATGCAGGGTATGTGTGATATTGCAGCACCCCTTTTGATTATATTCGATGATGAGAGCAA
AGTATACAGCTGCTTCACCCATCTTATGAAGAGGATGGGGGTAAACTTTCCAAATGGGGG
GGCTATGGACACGCATCTTGCGAATGTCCGCTCATTATTACAGGTTCTGGATCCAGAATT
GTATGAACACATGCATCAAAATGGAGATTACACTCACTTTTACTTCTGTTATCGTTGGTT
TTTGTTAGATTTTAAAAGAGAATTGTCCTATAAAGACGATGTGTTTGCTGTTTGGGAAAG
GATATGGTCGGCTGAATATTGTTCGTCCAATCATTTTGGAATATTTTTTGCTTTAGCGAT
GCTCAACAATTATCGAAATATTATTCTTGATAATGATATGGACTTCACCGATATTATTAA
GTTTTTTAATGAAATGGCTGAACGTCATGATGCCAAAAAGATCATAAAATTGGCGCAAAA
TTTTGTGTCTGATGTTCAACTGATGATCCATAATCGCAAAGTTACTATCATGTAA
| SUPERFAMILY |
Run_dom_sf (IPR037213) - T[11-192] 3.4E-21 |
| ProSiteProfiles |
Run_dom (IPR004012) - T[36-184] 16.897 |
| Pfam |
Run_dom (IPR004012) - T[44-181] 5.0E-24 |
| SMART |
Run_dom (IPR004012) - T[121-181] 4.3E-13 |
| CDD |
SGSM1/2 (IPR037745) - T[256-442] 5.11727E-79 |
| SUPERFAMILY |
Rab-GTPase_TBC_sf (IPR035969) - T[550-614] 6.54E-44 - T[827-946] 6.54E-44 - T[923-1043] 4.97E-28 |
| SMART |
Rab-GTPase-TBC_dom (IPR000195) - T[572-1015] 1.3E-33 |
| ProSiteProfiles |
Rab-GTPase-TBC_dom (IPR000195) - T[575-988] 30.048 |
| Pfam |
Rab-GTPase-TBC_dom (IPR000195) - T[821-1011] 8.3E-35 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SGSM1_HUMAN | 44.179 % | 509 | 2.37E-162 |
| SGSM2_HUMAN | 44.033 % | 893 | 0 |
| TBC15_HUMAN | 30.233 % | 126 | 1.15E-29 |