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- Transcript 'KH2012:KH.C3.199.v1....' >
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- Transcript 'Moocci.CG.ELv1_2.S58...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S580578.g23145.01.t
Possible name(s)
POU4F1; POU4F2; POU4F3
Gene model
Location
S580578 [18,366 / 22,503]
Amino acid sequence
Length: 434
>Moocci.CG.ELv1_2.S580578.g23145.01.p
MFTNMLAPHHGMHRPGSPLCPVSMTSLSGSSQNSLSPPEQKYAPLHNAADAMRRHCMPSP
VAYSGNLFAGFDESFLARAEALAAVDYSSKNQFKPEASVSTYYPMSAPAPHHMTSHQSPN
SSSSSLSTGSMVHPPMYSSMPPPGIHHPSALHPMSQSIGQSSLGISDSSNDLMEQLGNSS
HCSSFSTYQPPSLNTTSDIGSSFPVSSQPHYMSSLPTPHGSVVTGFNHPPSVSMSFPPSS
GLAPTTTSSTSDTTQTPGNCSPAIIQHTLPTSEYDTDPRELEAFAERFKQRRIKLGVTQC
DVGQALANLKLPGVGSLSQSTICRFESLTLSHNNMVALKPILMTWLEKAEEEYRRKMEEQ
GINEKKRKRTSIAAPEKRSLEAYFTVQPRPSSEKIAAIAEKLDLKKNVVRVWFCNQRQKQ
KRMKFSAFNGEQLI
Nucleotide sequence
Length: 2,095
>Moocci.CG.ELv1_2.S580578.g23145.01.t
TATTTTTAGATTCCAATTTGTTTAATTATAGGTTCAAATATTTATAACATCTTCAAGATA
GTCGAAACCGTTGGTTTGTACTTATTCAACTATCTATACGTGAAGTAAACAACAAAACAG
CAATGTTTACGAACATGTTGGCCCCTCATCACGGGATGCATAGACCCGGCTCCCCCCTCT
GTCCTGTTTCAATGACCAGTTTATCCGGATCCTCACAGAATTCACTTTCACCCCCAGAGC
AAAAATACGCACCCTTGCATAACGCGGCCGACGCAATGCGAAGACATTGCATGCCTTCGC
CCGTCGCTTATTCGGGAAATTTGTTCGCTGGATTTGATGAATCGTTCTTGGCCCGGGCCG
AAGCGCTTGCTGCTGTGGATTATAGCAGTAAAAACCAATTTAAACCGGAAGCATCTGTGT
CCACATATTACCCCATGTCAGCCCCGGCTCCCCACCATATGACGTCACACCAGTCACCCA
ATAGTAGTTCATCTTCGCTTAGCACCGGGTCAATGGTTCATCCACCAATGTACAGTTCAA
TGCCCCCACCAGGAATTCATCATCCGTCCGCGCTACACCCAATGTCACAGAGCATAGGTC
AAAGTTCACTTGGAATATCCGACAGTAGCAACGATTTAATGGAGCAACTTGGAAACTCTT
CACACTGCTCATCATTTTCAACTTACCAACCGCCATCACTGAACACAACGTCTGATATTG
GCTCAAGTTTTCCTGTATCCTCCCAACCACATTACATGTCCAGTTTGCCCACCCCACATG
GAAGTGTTGTGACAGGGTTCAATCACCCCCCATCCGTATCCATGTCTTTCCCCCCTTCCT
CAGGACTGGCCCCCACCACAACATCCTCAACATCCGACACCACTCAAACACCTGGCAACT
GTTCTCCAGCTATAATCCAGCATACCCTACCAACAAGCGAGTACGATACCGACCCTAGAG
AATTGGAAGCTTTCGCAGAAAGATTCAAGCAAAGAAGAATCAAGCTTGGAGTGACACAGT
GCGACGTTGGACAAGCTTTGGCAAACCTAAAACTTCCCGGCGTTGGTTCGTTGAGCCAAA
GCACAATCTGCAGGTTCGAGTCTCTTACCCTGAGTCACAATAACATGGTGGCATTAAAAC
CAATCCTGATGACCTGGCTGGAGAAAGCGGAAGAAGAATATAGAAGAAAAATGGAAGAAC
AAGGAATTAATGAAAAGAAACGAAAAAGAACATCCATAGCAGCCCCAGAGAAAAGATCAT
TAGAAGCTTACTTCACTGTGCAGCCTCGACCTTCCTCCGAAAAAATCGCCGCCATCGCCG
AAAAGTTGGATCTGAAGAAAAACGTCGTCAGAGTTTGGTTTTGCAACCAGAGACAGAAGC
AAAAAAGAATGAAATTTTCGGCTTTTAATGGGGAGCAGCTTATATAAAGTAATTAATCAA
GTGGAAATGACAAGACTGCTGCTTTGGCGCACAATCAATAGATGCGACCGGGCTTGAATA
TTGTAGGCCATAGAAAGAAGAGAGATAGGAAGGTGAAAACAAAAACATTTATTTACTTTT
TATTTATAACATAAACTAAACATATTTGTGTGGGAAATGATATTTTTACGACAAATTCAC
CCCATAATATTTTTCAATATAAAGCTACATCGCTGTACGTTTATTCCCAATACCAAATTT
CGAACAACTTTTTTATGTTATTATTTTTATCATTGACCAATTTTTTATACTGCCTCGTTT
GAAATTTTACTGTGCGACTGCTTTCAATATCCCGTACAAAATTGTTAAATTAATAATAAT
CTATTTTTCATATTCAAACTTGATCTTCAAGTAATGCGCAATTGTTTAAGCGTTGTTACA
AACAATCAACATTCCCTATTATTTATTTGCTCACAAACAAACATTATTCTATTTCATTTG
TTTTATTATTTTCAAACAATAGCAATTGTTATTACATGAAAGTTCCTATATTGTTTGAAT
CCTTATCTTCATTTTCAATTATTACGTTTCATTGTTATTTTATTGTTTATTTTAATAATT
GTATTACGTACTGTGTATTTTTGCTAAATAATAAATTTTATATTCACCTTATAAA
| SMART |
POU_dom (IPR000327) - T[273-350] 1.5E-49 |
| ProSiteProfiles |
POU_dom (IPR000327) - T[273-350] 47.025 |
| SUPERFAMILY |
Lambda_DNA-bd_dom_sf (IPR010982) - T[274-350] 3.54E-20 |
| Pfam |
POU_dom (IPR000327) - T[278-350] 9.4E-29 |
| ProSitePatterns |
POU_dom (IPR000327) - T[291-303] . - T[318-331] . |
| PRINTS |
POU (IPR013847) - T[292-309] 2.6E-34 - T[318-331] 2.6E-34 - T[334-349] 2.6E-34 - T[364-384] 2.6E-34 - T[399-414] 2.6E-34 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[363-423] 2.44E-15 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[363-423] 16.86 |
| SMART |
Homeobox_dom (IPR001356) - T[365-427] 1.2E-16 |
| CDD |
Homeobox_dom (IPR001356) - T[366-424] 1.28309E-15 |
| Pfam |
Homeobox_dom (IPR001356) - T[366-422] 1.8E-16 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[398-421] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PO4F2_HUMAN | 79.29 % | 277 | 1.51E-89 |
| PO4F3_HUMAN | 49.377 % | 306 | 5.49E-102 |
| PO4F1_HUMAN | 86.538 % | 276 | 2.8E-89 |