Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S3...' > 
  3. Region 'REG00001246' > 
  4. Transcript 'Moocci.CG.ELv1_2.S58...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S586795.g23568.01.t

Possible name(s)

SMG5; SMG6; SMG7

Gene model

Moocci.CG.ELv1_2.S586795.g23568

Location

S586795 [995 / 12,208]

Sequences

Amino acid sequence

Length: 936

>Moocci.CG.ELv1_2.S586795.g23568.01.p
MFSYPLEYGKRAEEFIWRKVYYEVIQLVKRNKRFEKPSAALTAHYRQLLQAGIGFYHHLL
LKLQAYFEFESEVDWPFSVSPLGGKSKKLLFDKSKLTDIQNDEDTEDKTKQLHEWSKHMC
YRAFMCLGDLGRYQLDFGGSRPFAERFYHLALLAKPNAGMPYNQLGTLSGHYQWWDQQTY
TQIQFYLYTIWTSHKKCAMFFSSESIFYSLETESKFEGAEGNLQKLLDRNKKTFYHIPTD
ALENFLCTPREYAAVSNTISRDYAVENVSQMQPHFIFKMTVICIINIHNLQSSRSNRSSA
AIAFTLAFFSHLLGFVISNLSQDVKKNLTPLKNVSLKSASCGYCNRICLLEQKKSGAGDG
LSDAELKSVEEQDEKVPINRHERPEGNEVGGDGDSATAGVRKNKSKKRPGRRRRYRKNDD
SDLSEGEEKNPGIQKVYQDAKNLVGRFRMSVSLYSLITHILNTIHLSNSYRPKIKPNNNT
NWQLPLKNTAIKNHKFAYKYNKATGWVLATFLHGIEVAENIVIGVIKIVISDSEEDSSLS
SDDSLPDSTDSDFSQEEIENIGEDNDTKDKKLKQKSDAESLNPVLATEKRNGLKLANSLS
NGPSTLASLKDISQKMFQPPVRRKIRLAPSFLNKVEEKEEKTVSTMDGYKIKNDSPINNP
QKEIVVNGEISAEKQDLKVLQTSDVKPDVDNSENTIVDNNNQSEPDENASSHNDAVSGWS
FKAYSKDEQMAHFKLIMRLTYFTQSLKLLCDWLAKNKQVTEACAQNSRVLWSRIAKLANL
LPNETTFKTMGDEMIDSQVKKCFSTNVSWSQVIKLPEDDVLSRGGVVIDKKTNESIIPTK
QSNEVQQTSRVVAAIRVLRYRSLCYSLSKFEGLDITYDSKTQIFTGPEEDSDQQAELEIE
LCYIIFLQVSDGRQSNAISFILAAKSVSAMHKSPKK

Nucleotide sequence

Length: 2,839

>Moocci.CG.ELv1_2.S586795.g23568.01.t
AACCAAACTTCGAGATGCATGTGAAAAGTTGATGTTTTCTTATCCATTGGAATATGGAAA
GAGGGCTGAGGAGTTTATTTGGAGGAAAGTTTATTATGAAGTTATACAACTTGTAAAAAG
AAATAAAAGGTTTGAAAAACCAAGTGCTGCTTTGACCGCACATTACAGGCAATTGTTGCA
AGCTGGGATAGGATTTTATCATCACTTGTTACTGAAATTACAAGCATACTTTGAGTTTGA
ATCAGAGGTTGATTGGCCTTTTTCTGTTAGTCCACTGGGAGGAAAATCCAAGAAGTTGTT
GTTTGATAAAAGCAAGCTGACTGATATCCAAAATGATGAAGACACTGAGGATAAAACAAA
ACAGTTACATGAGTGGTCTAAGCACATGTGTTATAGAGCTTTCATGTGCTTGGGAGATCT
AGGTCGATACCAACTTGATTTTGGTGGATCAAGACCCTTTGCTGAGAGATTTTATCACTT
AGCTTTGCTGGCAAAACCTAATGCAGGAATGCCATACAACCAACTTGGAACACTTTCTGG
TCATTATCAATGGTGGGATCAGCAAACATATACACAAATTCAATTTTATCTTTATACTAT
CTGGACAAGCCACAAAAAATGTGCTATGTTTTTTTCCAGTGAAAGTATCTTTTACAGTTT
GGAAACTGAAAGTAAATTTGAAGGAGCGGAGGGAAACTTACAAAAGTTGTTAGATCGTAA
CAAGAAAACGTTTTACCACATACCTACCGATGCTTTGGAAAATTTCCTATGCACACCAAG
AGAATATGCTGCTGTTAGCAATACTATTTCTAGAGATTATGCTGTAGAGAATGTTTCTCA
AATGCAACCACACTTTATTTTTAAGATGACTGTGATCTGTATTATTAATATTCATAACTT
GCAGTCTTCTCGGTCGAACAGATCTTCGGCTGCAATTGCTTTTACGTTGGCATTCTTCAG
CCATCTGCTTGGTTTTGTAATATCAAACCTGTCACAAGATGTAAAGAAAAATTTAACTCC
ATTAAAAAATGTTAGTCTTAAATCTGCCTCTTGTGGCTATTGTAATCGAATATGCTTATT
GGAGCAAAAAAAAAGTGGAGCAGGAGACGGATTGTCAGATGCAGAACTAAAAAGTGTTGA
AGAACAAGATGAAAAAGTACCAATTAATAGGCATGAAAGACCCGAAGGTAATGAAGTAGG
AGGAGATGGTGACTCTGCAACTGCTGGTGTTCGAAAAAACAAAAGCAAGAAGAGACCTGG
AAGGAGGCGACGTTACAGGAAGAATGATGATAGTGATCTTAGTGAGGGAGAGGAAAAAAA
TCCTGGGATCCAGAAAGTTTACCAAGATGCCAAAAATCTTGTTGGTAGATTTCGAATGTC
TGTGTCGCTCTACTCGCTCATTACACACATTTTAAACACCATTCACCTGTCTAACTCTTA
TAGGCCTAAAATCAAGCCTAACAACAACACGAATTGGCAGTTGCCACTTAAAAACACAGC
AATAAAAAATCACAAATTTGCATATAAATACAATAAAGCAACTGGTTGGGTTCTGGCAAC
TTTTCTTCATGGGATAGAAGTAGCAGAGAATATCGTAATCGGCGTAATTAAAATTGTTAT
ATCGGATTCTGAAGAGGATTCTTCTTTGTCATCCGATGACAGTCTTCCTGATTCAACTGA
TTCAGATTTTAGCCAAGAGGAAATCGAAAATATTGGTGAAGATAATGATACCAAAGACAA
AAAGTTAAAGCAAAAGTCTGATGCAGAATCCTTAAACCCAGTTTTAGCAACAGAAAAACG
AAATGGTTTGAAACTTGCTAACAGTTTATCCAACGGCCCAAGTACTCTTGCCAGTTTAAA
AGATATTTCACAAAAAATGTTTCAGCCTCCTGTGAGAAGAAAGATACGGTTAGCTCCATC
TTTTTTAAACAAAGTTGAAGAAAAGGAGGAAAAAACTGTTTCTACGATGGATGGCTATAA
AATTAAAAATGACAGCCCAATCAACAATCCCCAAAAAGAAATTGTTGTTAATGGCGAAAT
TTCAGCAGAAAAACAAGATCTAAAAGTTTTGCAAACTTCCGATGTAAAACCAGACGTTGA
TAATTCAGAGAATACCATTGTTGATAACAACAACCAAAGCGAACCTGATGAAAATGCATC
ATCACATAATGATGCAGTATCTGGATGGAGTTTTAAGGCATATTCCAAAGATGAACAAAT
GGCACACTTTAAATTGATCATGCGACTAACATACTTTACTCAATCCCTAAAGCTCCTGTG
TGATTGGTTGGCTAAAAACAAGCAAGTGACCGAAGCATGTGCTCAAAATTCAAGAGTTTT
GTGGAGTCGAATTGCTAAACTGGCAAATTTGCTACCTAATGAAACCACTTTTAAAACTAT
GGGTGATGAAATGATAGACAGCCAGGTAAAGAAATGTTTTTCTACAAATGTATCTTGGAG
CCAAGTAATTAAGCTTCCGGAGGATGATGTATTATCTCGTGGTGGAGTTGTTATCGATAA
AAAAACGAATGAAAGTATTATACCAACAAAACAATCCAATGAAGTACAACAGACTTCTAG
AGTCGTGGCTGCTATAAGGGTCCTTCGATACAGAAGTCTATGTTACTCTTTGTCAAAATT
TGAAGGCTTGGATATAACATATGATAGTAAGACTCAAATCTTCACAGGACCTGAGGAAGA
CAGCGACCAGCAGGCTGAGCTTGAAATTGAGCTTTGTTACATCATATTTTTACAAGTTAG
TGATGGCCGACAATCTAATGCCATATCTTTTATTTTGGCAGCAAAATCTGTGAGTGCCAT
GCACAAGTCTCCCAAGAAG

InterProScan

SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[5-339] 1.18E-38 - T[743-893] 1.18E-38
Pfam
EST1 (IPR019458) - T[12-137] 2.7E-19
Pfam
DNA/RNA-bd_Est1-type (IPR018834) - T[144-233] 4.1E-7 - T[265-336] 2.0E-5

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMG5_HUMAN 31.429 % 185 4.91E-48