- Transcript 'Mooccu.CG.ELv1_2.S57...' >
- Transcript 'Moocci.CG.ELv1_2.S59...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S590614.g23887.01.t
Possible name(s)
LRP1B; LRP2; SORL1
Gene model
Location
S590614 [33,957 / 40,486]
Amino acid sequence
Length: 784
>Moocci.CG.ELv1_2.S590614.g23887.01.p
MPRFQCSNGSVIGFDKFCDGFLDCADGSDEIEDESIGAKIMCENTAVSLSKHCLLETRYF
CEDLISCHNMTKCDARCNTHYLCQNGNCMERSTICDGSSCNGCSEDHGWANGIGFKCRKN
GVECVLPQQLTWDNSSDCDGNIDRCFEFPNDYTPADPWDLRNEPAASFNTSVCNGIVDCP
DLSDECVCQNDISEVCQHMQLLSFSNKTLNQTSKKFKCLNESIINASDICNGVSDCLQAE
DESFESCGGTKSCKLSTSKEKFCRCEEYNVPFLCEKPVGVPCNNVEECSPSKSPFYTEWT
DEVNHLINNVQGNELFEQYEEYLTIYFNDDVSCDGIPHCKDFDDEKGCDNRFNCLSKNLY
NIPLDDVCNGGNELIEQYEEYPTIYFDDDVSCDGIPHCKDFGDEKGCDNRFICFSKNSIN
IPLDDVCNGVVDCDFGEDEDEELCKDRERFYCLAQKGNIVSIQDKYVCDFYIDCDDKSDE
ANCSTNERFYCENGIPLFVTNRRVKDGRPDCTDWSDECPTQGQFKTDNVFSSKSELIANL
FLRVWIWIMATLALGGNLVKDGRPDCTDWSDECPTQGQFKTDNVFSSKSELIANLFLRVW
IWIMATLALCGNLGSYCSQDLTWRSSSTCSFLGVLSSLSSEASISIMVMLTSCRMYAVLK
PHMSYSFPRKFILRIMIGGSWLVASVLAGLPLSSYLQETFIDRVSFPSNPFAQLRGIALN
ETKTMIHRMLTYDLNNLTSKEVTIHKVFASKNSSLPHQTLPGIFLSLSTCSIFLRSFMSP
QLIQ
Nucleotide sequence
Length: 2,978
>Moocci.CG.ELv1_2.S590614.g23887.01.t
ATGCCACGCTTCCAATGTAGCAACGGAAGCGTCATCGGATTCGATAAGTTTTGTGACGGA
TTTCTGGACTGTGCGGACGGAAGTGATGAAATAGAAGACGAAAGTATTGGAGCTAAAATA
ATGTGTGAAAATACCGCGGTCTCACTCTCTAAGCATTGTCTTCTTGAAACTCGGTATTTC
TGTGAAGATTTGATATCGTGCCATAACATGACCAAGTGTGATGCCAGATGTAACACTCAC
TATCTCTGTCAAAATGGAAACTGCATGGAACGCAGCACGATTTGCGATGGTTCAAGCTGT
AATGGATGTTCAGAAGATCATGGATGGGCAAATGGAATCGGATTCAAGTGCAGGAAGAAC
GGAGTAGAGTGCGTACTTCCTCAGCAACTTACTTGGGACAATTCTTCTGATTGTGATGGA
AATATTGATAGATGTTTTGAATTTCCAAATGATTATACACCTGCAGATCCATGGGACCTA
CGCAACGAACCTGCCGCAAGTTTCAATACTAGTGTTTGCAATGGAATTGTTGATTGTCCA
GATCTATCAGATGAATGTGTTTGTCAGAACGATATATCTGAAGTGTGCCAGCATATGCAA
CTACTGTCTTTTTCCAACAAGACTTTAAATCAAACATCCAAAAAGTTTAAATGTCTTAAT
GAAAGTATCATAAACGCATCTGATATTTGTAATGGAGTTTCCGATTGCTTACAAGCTGAA
GACGAAAGCTTTGAATCTTGCGGTGGAACAAAATCATGTAAATTGTCTACATCTAAAGAA
AAGTTTTGTAGATGCGAGGAATACAATGTTCCTTTTTTGTGTGAAAAACCAGTTGGAGTT
CCTTGCAATAATGTAGAAGAATGCAGTCCTTCAAAGAGCCCATTTTATACTGAGTGGACA
GATGAGGTGAACCATCTTATTAACAATGTACAGGGCAACGAACTTTTTGAACAATACGAA
GAATATCTCACTATTTATTTCAACGATGACGTATCTTGTGATGGAATACCACATTGTAAA
GACTTCGACGACGAGAAAGGCTGCGATAACAGATTTAATTGTTTGTCCAAAAATTTATAT
AATATTCCACTTGACGATGTTTGCAACGGAGGCAACGAACTTATAGAACAATACGAAGAA
TATCCCACTATTTATTTCGACGATGACGTATCTTGTGATGGAATACCACATTGTAAAGAC
TTCGGCGACGAGAAAGGATGCGATAATAGATTTATTTGTTTTTCCAAAAATTCAATTAAT
ATTCCACTTGACGATGTTTGCAACGGAGTTGTTGATTGTGATTTTGGTGAAGACGAAGAT
GAAGAATTATGCAAAGACCGTGAAAGATTTTATTGTTTAGCGCAGAAAGGAAATATAGTG
AGCATACAAGATAAGTACGTTTGTGATTTCTACATTGACTGCGATGATAAAAGTGATGAG
GCAAATTGTTCAACCAATGAAAGATTTTACTGTGAAAATGGAATACCACTGTTTGTTACG
AATAGAAGGGTGAAAGATGGAAGACCTGATTGTACAGATTGGAGCGATGAATGTCCAACA
CAAGGACAATTTAAAACCGACAATGTTTTTTCTTCAAAATCAGAACTTATTGCAAACTTA
TTTTTGCGAGTTTGGATTTGGATAATGGCAACGCTTGCATTGGGTGGAAACTTGGTAAAA
GATGGAAGACCTGATTGCACAGATTGGAGCGATGAATGTCCAACACAAGGACAATTTAAA
ACCGACAATGTTTTTTCTTCAAAATCAGAACTTATTGCAAACTTATTTTTGCGAGTTTGG
ATTTGGATAATGGCAACGCTTGCATTGTGTGGAAACTTGGGTAGTTATTGTTCGCAAGAT
TTAACCTGGAGATCAAGCTCAACATGTTCTTTTCTTGGGGTGTTATCAAGTCTTTCCAGT
GAAGCTTCCATTTCGATTATGGTCATGTTGACTTCTTGTAGAATGTATGCTGTCTTAAAA
CCACATATGTCGTACTCTTTTCCAAGAAAATTCATTCTCAGAATAATGATTGGTGGTTCC
TGGCTTGTAGCATCTGTACTTGCAGGTTTGCCGTTAAGTTCGTATCTACAAGAAACTTTT
ATCGACAGAGTTTCCTTTCCATCCAACCCTTTCGCTCAACTACGAGGAATTGCGCTCAAT
GAAACAAAAACAATGATACATCGGATGCTGACATATGACTTGAATAATCTCACCAGTAAA
GAAGTTACTATTCACAAAGTGTTTGCGTCCAAAAATTCTTCGTTACCACATCAGACACTT
CCTGGCATTTTTCTTTCGTTGTCAACGTGTTCAATTTTCTTGCGTTCATTTATGTCGCCT
CAGCTTATACAGTAATCTACATGAAAGCTCTTAGCAGCAAAAAAATCAGCTCTAAAATCA
CTCAGTCTGACAAAAAAACACAATCGATACAAAGAAAGATTCTACGCCTTGTGATAACTG
ATTTCTGCTGTTGGATTCCAATTACTGTGATGGCTTTTGTCCAACTTGCATCTGGAAAAC
TTCCGGATGAAGCTTATCCTGTTGCCGCCATTGTTTTGCTTCCCATCAATAGCGCACTCA
ACCCGATACTTTATTCTGATTTTTTGGATAAATTGGTGAGAAAGTTATCAAGCAAAAAAA
GCAGCGAAATACATCCGTCATCCACAAAAAATTCAAAGATCACAAGCAACTACTCTACTT
CTGATACTGACAATTCCAAAGTTGTACAGACAAGACTCTGAAAAAGCAAAGAGAAAAAAC
TCTACCTCCTTCAATGTCTACCTGAATTAAAGCAATATATCCAAGTTTTACCTATTTCTT
TACATATGATAGTATTTTCTCAAGAATTATATTTACTTTTGTACATAAATTTTTGTTATC
AAAGTTTTTAGTTAGATCGAAGAATTTGTTTATTTCTATTACTAAACCACGTATAGTAAT
TGCATGTTCTTTAATAAAAAAATTAAACAACTTCGAAA
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[1-36] 0.015 - T[210-249] 0.086 - T[406-446] 0.008 - T[482-520] 0.038 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[1-43] 8.85 - T[432-484] 9.088 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[3-32] 6.41E-8 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[4-30] 6.30901E-5 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[9-30] 1.4E-15 - T[221-242] 1.4E-15 - T[418-439] 1.4E-15 - T[459-480] 1.4E-15 - T[496-517] 1.4E-15 |
| PANTHER |
TSHR/LHCGR/FSHR (IPR034298) - T[18-58] 1.2E-33 - T[172-295] 1.2E-33 - T[333-559] 1.2E-33 - T[561-613] 1.2E-33 - T[614-701] 1.2E-33 |
| Protein Name | Identity | Bit Score | e-value |
|---|