- Transcript 'Boleac.CG.SB_v3.S246...' >
- Transcript 'KH2012:KH.C14.125.v2...' >
- Transcript 'Cisavi.CG.ENS81.R77....' >
- Transcript 'Moocci.CG.ELv1_2.S49...' >
- Transcript 'Moocci.CG.ELv1_2.S59...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S590750.g23900.01.t
Possible name(s)
SLIT1; SLIT2; SLIT3
Gene model
Location
S590750 [14,795 / 29,030]
Amino acid sequence
Length: 1,545
>Moocci.CG.ELv1_2.S590750.g23900.01.p
MLSQTIKQTQTAGEKYTNNFRQMFLDTINLIKKVNLCIIASSNTTAYFCFINRNLSFNKL
RIVRQKMLRGPSSLRTLELNNNEITCIQDMGFRSVRNLEFLTLNNNNITTLSPQSFAQMP
RLRTFRLHSNPLYCDCHLAWLAAWLNERPSAGLFTQCAEPAALRGMEVKEVQKTEFFCNE
ITVKRRASCELSSFCPSACICENNIVDCRDKGLMSLPLNLPPGVTELRLEQNKIKVIPEE
AFTAYKKLRRIDLSNNEITDVGKNCFDGLQNLNSLILYGNKISSLPKGIFSKLTNLQLLL
LNANKIMCLRRDAFSDLRSLRLLSLYDNKLQTISKGTFTSLKSIQTLHLAQNPFICDCEL
QWLADYLQENPVETSGARCAAPRRLINKKIAQEKSRRFRCSDGDTYLRPLAGECSPEAEC
PSQCRCEGSTVDCSGQNLASIPDNIPLYVSELDLTFNNIEKIGNLGLFKKLRFLKKIDLS
NNKISEIEDGAFSDGTSVTELWLNDNLLDDIQSGIFTGLTNLRTLMIRNNRLTCVNNHTF
TGLSSIRHLSLYNNQISSIAKDAFRSFEMLTTLNLLSNPLKCNCHLSWLSTWLREGRFAS
GNPRCAEPASLNGFPVADINPQDFRCTAQEEQNPDSCEPEIKCPNKCSCEGGSVVRCINV
GLNSIPIHDIPDDVTELYLNLNHIRTIPAEIRRFTKLVKLDISNNELATLENYVFSNFTK
LSTLLIAYNKLKCVPPKAFSGLSALRILSLHGNELSTMEEGTFDDLVALSHIGLGSNPWY
CDCKLRWFGTWIKENYLEPGIARCTGPASAMGMVLLTMPFSSFVCDGFFNMAIASKCDPC
VSDPCLNNATCRLHPSEYYQCICPEGYKGKHCEMPINACVRKPCMNKGICSPHDEHMYTC
VCADGFEGKHCDVNIDDCAKSPCPTANATCVDGDNKYKCVCPMGWSGEMCELEIEDVCEA
RNPCLHGGNCVSYIEDDQSKYRCECAVGFRGENCAEIYDPCQNHKCENEGVCMRDESSPV
GYLCQCHPAFRGQFCEYQEGRSVGGLQRDDPCTEHDCLNGAECFTEPGSSDFNCRCLPGF
SGEKCQFRREESVKGISFIRNGSYANMETSLSEHAVLNLTLHLSTEHENGVLLYNGDVLG
TVKEHLAVELFSGHIRISYDAGSYPGSTLYSDVLVNDNRFHRIEIVINDETISMKIDNHE
PQDQPNKPGDVGILNVGSPLYVGGLPSDVLSLARNNWHIRNTTSFIGCIQHFYINDAIVD
FTSVLKTATSLAENESDFGIKPGCSKSRLMTTCADSSCNHGHCVYNGDDGFSCSCDEGYT
GEHCNEAVKVPDECVHNQCRHGNCVIDAASEDNYKCVCDAGYRGRHCETRDFCADVDCGR
KGVCQPTDSGYTCICGKGFTGTHCERRIRKCKGTRTRQYVQITLNKGARRNRSPAIMSST
SSLTSGGSMMCRSTRKFTNLVCDGSCSRSRRRSGSRSRKSRQHSAISSAFFPKNPNLNEA
SGTCCKPLRQKQKQIPLICDDGSRFVQEVTKVQSCGCQSFLYQLS
Nucleotide sequence
Length: 4,638
>Moocci.CG.ELv1_2.S590750.g23900.01.t
ATGCTGTCACAAACGATTAAACAAACGCAAACCGCCGGTGAGAAATACACAAACAACTTC
CGACAAATGTTTCTTGACACAATCAACTTGATAAAAAAAGTCAATCTTTGCATCATAGCA
AGTTCAAACACAACCGCATATTTTTGTTTTATCAACAGGAACCTGTCGTTTAATAAACTG
CGAATTGTGAGACAAAAGATGCTACGCGGGCCCAGCTCACTGCGCACATTGGAGCTTAAC
AACAACGAAATCACCTGCATCCAGGACATGGGTTTTCGATCCGTTCGCAATCTGGAGTTC
TTGACTTTAAACAACAACAACATAACAACACTGTCGCCTCAAAGCTTTGCTCAGATGCCG
AGACTTAGAACGTTCCGACTACACAGCAACCCTCTATACTGCGACTGCCACTTAGCGTGG
TTGGCAGCATGGCTAAACGAGCGACCGAGCGCTGGACTTTTTACACAATGCGCGGAACCG
GCGGCTTTACGTGGCATGGAAGTAAAAGAAGTTCAAAAAACCGAGTTCTTCTGTAATGAG
ATTACCGTGAAACGACGAGCTTCGTGCGAACTTTCGTCCTTCTGTCCCTCTGCATGCATT
TGTGAGAACAACATTGTGGATTGCAGGGATAAAGGTTTGATGTCACTTCCGCTTAATTTG
CCGCCCGGAGTCACGGAATTGCGTTTAGAACAAAATAAGATTAAAGTTATCCCAGAAGAA
GCTTTTACGGCCTACAAAAAGCTCAGACGAATCGATTTAAGCAACAATGAAATTACAGAC
GTTGGAAAAAATTGTTTTGATGGATTGCAAAATTTAAACTCTTTGATTTTATACGGGAAC
AAAATTTCGAGTTTACCGAAAGGGATTTTTTCGAAGCTGACTAATCTGCAACTTCTGTTG
CTGAACGCAAACAAGATTATGTGTCTAAGACGCGATGCGTTCTCTGATCTCCGATCGCTT
CGACTTCTGTCGCTTTATGACAACAAACTACAAACGATCTCAAAGGGAACCTTCACATCG
CTTAAATCAATACAGACTCTACATCTCGCACAGAACCCGTTTATATGCGATTGTGAGCTG
CAGTGGTTGGCGGATTATCTACAGGAGAACCCTGTAGAGACGAGTGGAGCCAGATGCGCG
GCGCCACGGAGGCTCATCAACAAGAAGATCGCTCAAGAAAAGAGCCGACGATTTCGCTGC
TCAGACGGAGATACTTACTTGCGACCACTAGCGGGCGAGTGTTCACCGGAAGCTGAATGT
CCTTCACAATGCAGGTGCGAAGGATCGACTGTTGATTGTTCGGGACAAAATCTAGCTTCG
ATCCCAGATAACATTCCGTTATATGTATCAGAACTTGATTTGACATTTAATAACATTGAA
AAGATCGGCAACTTGGGACTGTTTAAAAAGCTGCGTTTTTTAAAAAAGATTGATCTGTCG
AACAACAAGATTAGCGAGATTGAAGACGGCGCATTTTCAGATGGTACAAGCGTCACTGAA
CTGTGGTTAAACGACAATTTGCTGGATGACATACAGAGCGGAATATTTACTGGATTAACT
AATCTCCGAACATTAATGATCCGTAACAACCGGCTGACGTGTGTGAACAACCATACTTTT
ACCGGGTTGTCTTCAATAAGACATTTATCCCTGTACAATAATCAGATTTCCTCCATCGCC
AAGGATGCATTTAGATCTTTCGAAATGTTGACTACCTTAAATCTGTTATCGAATCCTTTG
AAATGCAACTGCCACTTGTCGTGGTTGTCGACGTGGTTACGTGAAGGTCGGTTTGCAAGT
GGCAATCCCAGATGCGCAGAACCTGCCTCGTTAAACGGATTCCCCGTGGCCGACATCAAT
CCCCAGGATTTTCGGTGTACGGCACAAGAAGAACAAAACCCAGATTCCTGTGAACCTGAA
ATCAAATGCCCGAACAAATGCAGCTGTGAAGGTGGTTCCGTGGTTAGATGCATCAACGTC
GGCTTAAACTCCATTCCGATACACGATATCCCTGATGACGTCACCGAGCTCTATCTGAAT
CTAAATCACATCCGAACAATCCCGGCTGAAATCAGAAGATTTACAAAACTTGTTAAGCTG
GATATTAGTAACAACGAATTGGCGACCTTGGAAAATTACGTGTTTTCTAATTTTACGAAG
TTATCAACACTCTTGATCGCTTACAACAAGCTCAAATGTGTTCCGCCGAAAGCATTTTCC
GGTTTATCTGCTCTTCGTATTTTGAGTCTCCATGGCAACGAACTATCAACAATGGAAGAA
GGAACATTTGATGATCTTGTTGCGTTATCTCACATCGGCCTTGGTTCAAACCCATGGTAC
TGTGACTGCAAGCTTCGTTGGTTTGGGACATGGATAAAAGAGAACTATTTGGAACCCGGA
ATCGCGCGATGTACAGGCCCCGCGTCGGCCATGGGAATGGTCCTCCTCACCATGCCATTC
TCGTCGTTTGTGTGCGATGGATTCTTTAACATGGCGATTGCTTCCAAGTGCGACCCTTGC
GTTAGTGATCCATGCCTCAATAACGCCACCTGCCGTCTTCACCCGTCTGAATATTACCAG
TGCATTTGTCCCGAAGGATACAAAGGCAAGCACTGCGAAATGCCGATCAACGCTTGTGTG
AGAAAACCTTGCATGAACAAAGGCATATGTTCGCCCCATGACGAACACATGTATACTTGT
GTATGTGCGGACGGATTCGAAGGAAAGCATTGTGACGTGAACATCGACGATTGCGCGAAA
AGCCCGTGCCCTACCGCCAACGCTACTTGTGTGGACGGTGATAACAAGTACAAGTGCGTG
TGTCCCATGGGATGGTCTGGTGAAATGTGTGAGCTTGAGATTGAGGATGTTTGTGAGGCA
AGAAATCCGTGTTTACACGGCGGAAACTGTGTTTCCTACATTGAGGACGACCAATCAAAA
TACAGATGTGAGTGCGCTGTGGGATTCCGCGGTGAAAACTGCGCAGAAATCTACGATCCT
TGCCAAAACCACAAGTGTGAAAATGAAGGCGTTTGTATGCGAGACGAAAGTAGTCCGGTC
GGTTACTTGTGTCAATGTCATCCAGCCTTCAGGGGACAATTCTGTGAGTACCAAGAAGGT
CGATCCGTTGGAGGGCTACAGAGAGATGACCCGTGCACTGAGCACGACTGCTTGAACGGT
GCAGAATGCTTTACAGAACCTGGATCCTCCGACTTCAACTGTAGATGTCTTCCTGGATTT
AGTGGTGAAAAGTGCCAGTTTAGAAGAGAAGAAAGTGTAAAAGGAATCAGTTTTATTCGA
AACGGAAGTTACGCAAACATGGAGACATCTTTGTCAGAGCATGCAGTATTGAATCTTACT
CTTCATCTATCCACGGAACATGAAAATGGAGTTTTGCTGTACAATGGCGATGTCCTTGGT
ACAGTAAAAGAGCATCTTGCAGTAGAACTGTTTTCTGGGCACATCCGGATAAGTTACGAT
GCTGGAAGCTATCCTGGTTCAACTTTGTACAGCGATGTTCTTGTAAATGACAATAGGTTT
CATAGGATTGAGATTGTGATAAACGATGAAACGATATCGATGAAAATTGACAACCACGAA
CCGCAGGATCAACCAAATAAACCAGGAGACGTTGGAATATTGAATGTCGGATCACCGCTT
TACGTTGGAGGCTTACCAAGTGATGTTTTATCTCTGGCTAGAAATAACTGGCACATTCGA
AACACCACAAGTTTCATTGGTTGCATTCAACATTTTTACATCAATGACGCAATAGTGGAT
TTTACTTCCGTGCTAAAAACAGCGACATCTCTGGCGGAAAATGAGAGTGACTTCGGAATC
AAACCCGGGTGTTCCAAATCCCGCTTGATGACGACGTGTGCCGATTCATCCTGTAACCAT
GGACACTGTGTGTACAATGGCGATGACGGGTTCTCGTGCAGTTGTGATGAGGGGTATACG
GGCGAACATTGTAATGAAGCTGTGAAGGTTCCGGATGAGTGCGTACATAATCAGTGTCGC
CATGGCAACTGTGTAATTGACGCAGCCAGTGAGGACAATTACAAATGCGTGTGTGATGCA
GGTTACCGGGGCAGGCACTGTGAAACTAGAGACTTTTGTGCGGATGTTGATTGCGGACGA
AAGGGAGTTTGTCAACCCACTGACTCCGGATACACTTGCATATGTGGAAAGGGATTCACC
GGTACACATTGCGAACGACGTATAAGAAAATGCAAAGGTACGAGAACGCGCCAATATGTG
CAAATTACACTTAACAAAGGAGCCAGGAGAAATCGATCACCCGCCATAATGTCATCAACG
TCTTCCTTGACATCAGGAGGAAGTATGATGTGCAGAAGTACGCGGAAGTTTACCAATCTT
GTTTGTGACGGTTCATGTTCCAGGAGTCGTAGAAGATCCGGTTCACGGTCACGAAAATCG
CGCCAACATTCAGCGATTTCATCGGCCTTTTTTCCGAAAAATCCCAATTTAAATGAAGCC
TCTGGAACATGCTGTAAACCTCTACGACAAAAGCAAAAACAGATTCCTTTAATTTGTGAC
GATGGTTCGAGATTTGTACAAGAAGTAACGAAAGTTCAAAGTTGCGGATGTCAGTCTTTT
CTGTATCAATTGTCGTGA
| Gene3D |
LRR_dom_sf (IPR032675) - T[51-186] 2.6E-32 - T[193-406] 4.3E-66 - T[417-634] 7.0E-63 - T[640-828] 8.1E-51 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[72-94] 21.0 - T[95-118] 0.011 - T[222-244] 26.0 - T[245-268] 17.0 - T[269-292] 0.0012 - T[293-316] 0.087 - T[317-340] 0.01 - T[471-494] 0.0059 - T[496-518] 29.0 - T[519-542] 0.18 - T[543-566] 0.0046 - T[694-717] 1.2 - T[718-741] 4.7 - T[742-765] 0.0042 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[72-132] 3.5E-13 - T[222-282] 2.8E-14 - T[295-353] 1.9E-11 - T[450-508] 9.6E-9 - T[520-580] 1.2E-12 - T[720-777] 4.3E-13 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[73-94] 7.496 - T[97-118] 7.904 - T[121-142] 4.547 - T[223-244] 5.664 - T[247-268] 6.796 - T[271-292] 7.427 - T[295-316] 5.363 - T[319-340] 6.48 - T[448-469] 6.618 - T[473-494] 7.966 - T[497-518] 5.756 - T[521-542] 6.287 - T[545-566] 7.273 - T[569-590] 5.887 - T[673-694] 5.517 - T[696-717] 7.288 - T[720-741] 5.71 - T[744-765] 5.841 |
| SMART |
Cys-rich_flank_reg_C (IPR000483) - T[130-179] 5.3E-9 - T[352-401] 8.3E-7 - T[578-627] 3.6E-13 - T[777-826] 7.0E-13 |
| Pfam |
Cys-rich_flank_reg_C (IPR000483) - T[154-178] 0.3 - T[377-401] 13.0 - T[602-626] 3.0E-5 - T[802-826] 2.0 |
| SMART |
LRRNT (IPR000372) - T[194-226] 1.9E-4 - T[419-451] 3.2E-7 - T[642-676] 0.14 |
| Pfam |
LRRNT (IPR000372) - T[420-446] 3.3E-6 |
| SMART |
EGF-like_Ca-bd_dom (IPR001881) - T[836-873] 0.099 - T[875-912] 0.029 - T[914-951] 2.0E-8 - T[956-995] 0.32 - T[1048-1086] 0.19 - T[1293-1325] 0.84 - T[1332-1368] 0.09 - T[1375-1405] 0.0057 |
| ProSiteProfiles |
EGF-like_dom (IPR000742) - T[838-873] 18.42 - T[875-912] 18.786 - T[914-951] 18.666 - T[954-995] 17.703 - T[997-1036] 16.29 - T[1048-1086] 19.254 - T[1289-1325] 14.11 - T[1330-1368] 15.327 - T[1369-1405] 16.321 |
| SMART |
EGF-like_dom (IPR000742) - T[839-873] 3.5E-5 - T[878-912] 1.4E-4 - T[917-951] 4.9E-6 - T[957-995] 8.6E-5 - T[1000-1036] 0.0095 - T[1051-1086] 4.8E-4 - T[1292-1325] 0.0018 - T[1333-1368] 2.7E-5 - T[1372-1405] 0.0013 |
| Pfam |
EGF-like_dom (IPR000742) - T[840-871] 6.7E-8 - T[879-910] 1.9E-4 - T[958-993] 1.1E-5 - T[1052-1083] 2.8E-5 |
| ProSitePatterns |
EGF-like_CS (IPR013032) - T[861-872] . - T[861-872] . - T[900-911] . - T[900-911] . - T[939-950] . - T[939-950] . - T[983-994] . - T[983-994] . - T[1024-1035] . - T[1074-1085] . - T[1074-1085] . - T[1313-1324] . - T[1313-1324] . - T[1356-1367] . - T[1356-1367] . - T[1393-1404] . - T[1393-1404] . |
| ProSitePatterns |
EGF_Ca-bd_CS (IPR018097) - T[914-939] . |
| Pfam |
EGF-like_CS (IPR013032) - T[927-945] 2.6E-4 |
| ProSitePatterns |
EGF-type_Asp/Asn_hydroxyl_site (IPR000152) - T[930-941] . |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[1069-1267] 1.9E-34 |
| ProSiteProfiles |
Laminin_G (IPR001791) - T[1094-1284] 37.614 |
| SMART |
Laminin_G (IPR001791) - T[1115-1257] 8.1E-31 |
| Pfam |
Laminin_G (IPR001791) - T[1124-1256] 3.6E-24 |
| SMART |
Cys_knot_C (IPR006207) - T[1439-1542] 1.6E-4 |
| ProSiteProfiles |
Cys_knot_C (IPR006207) - T[1451-1545] 10.521 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SLIT1_HUMAN | 45.067 % | 1250 | 0 |
| SLIT3_HUMAN | 43.307 % | 1206 | 0 |
| SLIT2_HUMAN | 45.606 % | 1267 | 0 |