Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,201

>Moocci.CG.ELv1_2.S590815.g23908.01.p
MLTKFETKSARVKGLSFHPKRPWVLSSLHNGCIQLWDYRMCTLLDKYEEHDGPVRGICFH
NKQPLFVSGGDDYKIKVWNYKLKRCIFTLLGHLDYIRTTVFHHEYPWILSASDDQTIRVW
NWQSRNCVAVLTGHNHYVMSAMFHPSEDSIVSASLDQSIRVWDIAGLRKKNLSPGSSVED
SGRGTGPSSIELFGTTDVVVKHVLEGHDRGVNWACFHPTMPLIVSAADDRLVKLWRMNES
KAWEVDSCRGHFNNVSCCGFHPKAELILSVSEDKSIRVWDMSKRTGVQSFRRDHERFWIL
ANHPTLNLFAAGHDNGMVIFKLERERPAFATHGSSLYYVKEKYLRKLDFSTSKDVPVMQL
RGSGSKASVYSMSYNPAENAVVITSRASNIENSTYDFYQIPKNVDSSNPDAPEGKRSSGL
TAVWVARNRFAVFDRTHTIIIKNLKNEISKKIQVPAVDEIFYAGSGSLLLRTPDGISLYD
VQQKRSLATVKIAKVKYVVWSDDMSHVALLSKHNISICNRKLESVATVHENDRVKSGAWD
EHGVFIYTTSNHIKYALHNGDHGIIRTLDLPIYITRVKGTSVYCLDREIRPRVLGIDPTE
YRFKLALINRKYDEVLHMVRNAKLVGQSIISYLQQKGYPEVALHFVKDEKTKFSLAVECG
DIEVALAAAKALDDKQCWEALGEVALAQGNHLVVEMAYQRTKNFDKLSFLYLLTGNLEKL
KKMMKIAEIRKDTSGHYQAALYLGDVSERVKILRSCGQTPLAYLTAATHGLEEEANELKE
EFEEGDNVPKIPENATLLQPVPPISQLKENWPLLTTTKGFFEGSIGTGGKATLAADIEDV
DTGAWGDDVDIMIDEEGGLIEGLDDDLNLDNEDGEGGGWDVDDEDLELPADLEIGDLPAG
EGGEGYFVAPVKGTPQTQLLHDQIGVTDFSQYKQIFMRTYARSRTAFTALPTIPPLYAYP
HRNWREAGARSGMPAVGLKLSDLANWLQAAYKLTTQGKFEDAIEKFRYIILSVPLLVVDN
KQEISEAQQLISICREYIVGLNMEQERKKLPKESQSDQIRSAEMAAYLTHCQWQPIHLTL
ALRTAQNLFFKLKNYKSAAGFARRLLELGPKPAVATQTRKIIAACDKNPRDVVELKYDAH
NPFDICAATYVPIYRGKPVEKCPLSGACYQPSFKGEVCRVTQCTEIGKDCVGLRISSIQF
R

Nucleotide sequence

Length: 3,816

>Moocci.CG.ELv1_2.S590815.g23908.01.t
ATGCTGACAAAATTTGAAACCAAGTCGGCTCGTGTAAAAGGACTATCATTTCACCCTAAA
AGACCATGGGTTTTGTCTTCCTTACATAACGGGTGTATTCAACTATGGGATTATCGAATG
TGTACTTTGCTTGACAAATACGAAGAACATGATGGTCCTGTACGAGGAATATGTTTCCAC
AATAAACAGCCACTGTTTGTTTCTGGAGGGGATGACTACAAAATAAAAGTCTGGAATTAT
AAACTGAAGCGGTGTATATTTACTCTGCTTGGGCATCTCGATTATATACGAACTACAGTA
TTTCATCATGAATATCCATGGATTCTTAGCGCTTCTGATGACCAGACAATCCGAGTATGG
AATTGGCAGTCAAGAAATTGTGTTGCTGTGCTTACTGGCCACAATCATTATGTGATGTCG
GCCATGTTCCACCCATCAGAAGACAGTATTGTATCAGCTTCTCTTGACCAGTCTATTCGT
GTTTGGGACATTGCAGGCTTACGAAAGAAAAATTTATCGCCTGGATCATCTGTTGAGGAC
TCTGGTAGAGGTACTGGACCATCATCAATAGAATTATTTGGGACAACTGATGTTGTTGTA
AAGCATGTTTTGGAGGGCCATGACCGAGGAGTTAACTGGGCTTGCTTCCATCCAACAATG
CCTTTGATTGTATCCGCTGCTGATGATCGACTTGTTAAGTTGTGGCGAATGAATGAGTCA
AAGGCTTGGGAGGTTGACTCTTGTCGAGGACATTTCAACAATGTATCATGCTGTGGCTTC
CACCCTAAAGCTGAGTTAATACTGAGTGTTTCAGAAGACAAATCTATCCGAGTATGGGAT
ATGAGCAAGAGAACTGGTGTGCAATCATTTAGAAGAGATCATGAAAGATTTTGGATATTG
GCTAATCATCCAACACTGAACTTATTTGCTGCTGGTCATGATAATGGCATGGTTATATTC
AAGCTTGAAAGAGAGCGTCCAGCTTTTGCGACTCATGGAAGCTCTTTGTATTATGTAAAG
GAAAAATACTTAAGAAAACTGGACTTTTCAACAAGCAAGGATGTTCCAGTAATGCAACTG
AGAGGAAGTGGTTCAAAGGCATCAGTTTATTCCATGTCATACAATCCTGCCGAAAATGCT
GTTGTAATAACATCTCGAGCATCTAATATTGAGAATTCAACTTATGATTTTTACCAGATT
CCCAAAAATGTAGATTCTTCAAATCCTGATGCTCCTGAAGGAAAGCGATCATCAGGTCTA
ACTGCTGTTTGGGTTGCTCGCAATAGATTCGCTGTTTTTGATAGAACTCATACAATCATT
ATTAAGAACCTTAAAAATGAGATTTCCAAAAAGATCCAAGTCCCTGCTGTTGATGAGATA
TTTTATGCTGGATCCGGTTCTCTTTTGCTTCGTACACCGGACGGAATTAGTTTGTATGAT
GTCCAGCAAAAAAGATCACTAGCCACTGTTAAGATTGCCAAGGTAAAATATGTTGTTTGG
TCTGATGACATGTCCCATGTGGCACTTTTATCCAAACATAACATCTCAATTTGCAACCGC
AAATTAGAATCAGTCGCAACTGTTCATGAAAATGACAGAGTAAAATCTGGAGCTTGGGAT
GAGCATGGTGTCTTTATTTATACTACTTCAAATCATATTAAATATGCCCTCCACAATGGG
GATCATGGAATCATTAGAACTTTGGATCTTCCAATCTATATTACTCGAGTTAAGGGAACA
AGTGTCTATTGTCTGGACAGAGAAATTCGACCAAGAGTTCTTGGGATTGATCCAACAGAG
TATAGATTTAAGCTTGCTTTGATTAATCGCAAGTATGATGAAGTTCTGCACATGGTGAGA
AATGCAAAACTGGTTGGACAATCCATTATTTCATACCTGCAACAAAAGGGGTATCCAGAA
GTGGCTCTTCACTTTGTCAAAGATGAAAAGACCAAATTCTCTCTTGCGGTTGAATGCGGG
GACATAGAGGTTGCTCTTGCAGCTGCAAAGGCACTTGATGATAAGCAGTGCTGGGAAGCT
CTAGGTGAAGTTGCGCTTGCTCAAGGAAACCATCTAGTTGTTGAAATGGCTTATCAAAGA
ACCAAAAACTTTGATAAACTGTCTTTCCTGTACTTGCTTACAGGAAATTTAGAGAAGCTA
AAGAAAATGATGAAAATTGCTGAAATTCGCAAAGATACTTCTGGTCATTATCAAGCTGCA
TTGTACTTGGGAGATGTGTCTGAGCGTGTCAAAATACTGCGCTCTTGTGGCCAAACTCCT
TTGGCATATCTAACAGCTGCTACCCATGGTTTGGAAGAAGAAGCTAATGAGCTTAAAGAA
GAGTTTGAAGAGGGAGATAATGTTCCAAAAATTCCAGAAAATGCAACACTCTTACAGCCT
GTCCCACCTATTTCACAGCTCAAAGAAAACTGGCCTCTTCTAACAACAACTAAAGGATTT
TTCGAGGGTTCAATCGGTACAGGTGGCAAAGCAACTCTTGCTGCAGATATTGAGGATGTA
GATACTGGGGCTTGGGGTGATGATGTTGATATCATGATTGATGAGGAAGGAGGACTTATT
GAGGGATTGGATGATGATTTGAACCTGGACAATGAGGATGGAGAAGGAGGGGGATGGGAT
GTTGATGATGAAGACCTCGAGCTTCCTGCTGATTTGGAGATTGGCGATCTACCAGCTGGT
GAAGGCGGAGAAGGATATTTTGTTGCCCCAGTCAAAGGCACTCCACAAACTCAACTTCTG
CATGATCAAATTGGTGTAACGGATTTCTCGCAGTACAAACAAATATTTATGAGAACGTAT
GCCCGCAGTCGAACTGCATTTACAGCCCTGCCCACAATTCCACCACTTTATGCTTACCCA
CACCGAAATTGGAGGGAAGCTGGCGCACGTTCCGGTATGCCAGCAGTTGGTTTGAAATTG
TCTGATCTGGCAAACTGGTTACAAGCCGCGTATAAACTCACAACACAAGGAAAGTTTGAA
GACGCGATTGAAAAGTTTCGATATATTATTTTATCAGTTCCACTTCTTGTTGTAGACAAC
AAACAAGAAATTAGCGAGGCGCAGCAACTGATATCAATTTGCAGGGAATATATTGTTGGA
TTGAATATGGAACAAGAGCGTAAAAAGTTGCCGAAGGAATCTCAGAGCGATCAGATTAGA
TCCGCAGAAATGGCAGCTTATCTGACACATTGCCAATGGCAACCGATTCATTTAACGTTA
GCATTGAGAACAGCTCAAAATTTGTTTTTCAAATTAAAAAATTATAAGTCCGCAGCCGGT
TTTGCCCGGCGCTTACTGGAATTGGGACCAAAACCAGCAGTTGCAACGCAAACAAGAAAA
ATTATTGCAGCGTGCGACAAAAATCCCCGTGATGTCGTAGAGCTTAAATACGATGCTCAC
AATCCGTTTGACATTTGTGCCGCGACCTATGTTCCTATCTACAGAGGCAAACCGGTTGAG
AAGTGTCCTCTTAGCGGAGCTTGTTACCAACCATCTTTCAAAGGTGAAGTTTGTAGGGTG
ACACAATGCACAGAAATTGGTAAAGATTGTGTTGGCCTTCGTATTAGTTCCATACAGTTT
CGATAAAATGTACATATTTCATCCACATCGCTTTTATTGACTAATTTTTTCTTGGACACT
ATTTGTGCAAATAGGACTTCTCAGCTGTATTTGTTGGCTTGTACTTATATTTTATTATGT
TATGATAGAAATATACGTTAACTAATTAGGATAAGACTTATTTAAAAATTTATTGTTTCC
ATTTTCTATAAATACAATATACAAGTATATAAAAAA

InterProScan

Gene3D	WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[1-323] 3.6E-125
PIRSF	Coatomer_asu (IPR016391) - T[1-1197] 0.0
SMART	WD40_repeat (IPR001680) - T[2-37] 5.1 - T[40-79] 1.6E-6 - T[82-121] 1.5E-6 - T[124-163] 2.7E-9 - T[197-236] 3.2E-6 - T[241-280] 9.0E-7
SUPERFAMILY	WD40_repeat_dom_sf (IPR036322) - T[5-168] 1.1E-70 - T[200-319] 1.1E-70
ProSiteProfiles	WD40_repeat_dom (IPR017986) - T[5-289] 47.378
Pfam	WD40_repeat (IPR001680) - T[12-37] 0.23 - T[44-79] 2.3E-5 - T[84-121] 3.3E-6 - T[126-163] 1.7E-5 - T[202-235] 0.002 - T[245-280] 1.0E-5
ProSiteProfiles	WD40_repeat (IPR001680) - T[47-88] 12.346 - T[89-130] 12.313 - T[131-164] 14.786 - T[204-245] 12.012 - T[248-289] 14.017
PRINTS	G-protein_beta_WD-40_rep (IPR020472) - T[108-122] 1.6E-6 - T[150-164] 1.6E-6 - T[267-281] 1.6E-6
ProSitePatterns	WD40_repeat_CS (IPR019775) - T[150-164] . - T[267-281] .
Pfam	Coatomer_WD-assoc_reg (IPR006692) - T[346-770] 2.1E-142
Pfam	Coatomer_asu_C (IPR010714) - T[818-1201] 2.7E-149