Login
Help

Submit your Data

  1. Clone 'cien80364'
  2. Transcript 'Moocci.CG.ELv1_2.S59...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S591210.g23927.01.t

Possible name(s)

DDX6; EIF4A1; EIF4A3

Location

S591210 [6,296 / 10,703]

Sequences

Amino acid sequence

Length: 321

>Moocci.CG.ELv1_2.S591210.g23927.01.p
MYTMIMVPTRELALQTSQIAIELSRHMGPLNIMATTGGTNLRDDILRLESSVHLIIATPG
RILDLISKGIAKVDRCNMFCLDEADKLLSQDFKRMIYDILTYFGQTRQILLFSATFPVTV
KDFMQQTMRKPYEINLMDELTLKGITQYYAYVEEKKKVHCLNTLFSKLQINQSIIFCNST
HRVELLAKKITELGYSCFYIHARMKQDYRNRVFHDFRQGLCRNLVCSDLFTRGIDIQAVN
VVINFDFPKMSETYLHRIGRSGRYGHLGLAINLITHHDRFSLKTIEDELNTEVKPIPAVI
DKSLYVAEFSQEEDEKKNGGI

Nucleotide sequence

Length: 2,610

>Moocci.CG.ELv1_2.S591210.g23927.01.t
ATGTACACCATGATTATGGTTCCTACCCGTGAACTGGCCTTACAAACCTCGCAAATTGCC
ATTGAACTAAGTAGGCATATGGGGCCCTTAAACATAATGGCAACAACTGGTGGTACTAAT
TTAAGAGATGATATTTTAAGACTGGAAAGTTCAGTACACCTGATCATTGCGACACCAGGA
AGAATTCTGGATTTAATCAGCAAAGGTATTGCCAAAGTTGACAGATGCAACATGTTTTGC
TTAGACGAGGCTGACAAATTACTTTCACAAGATTTCAAAAGGATGATATATGACATTCTT
ACATACTTTGGACAAACCCGTCAGATTTTGTTATTTTCTGCTACTTTCCCAGTCACTGTG
AAAGATTTTATGCAACAAACCATGCGAAAACCATACGAAATCAATCTAATGGATGAATTA
ACTCTAAAAGGTATAACACAATATTATGCCTATGTTGAAGAGAAAAAGAAAGTACATTGT
CTTAACACATTATTTTCGAAGCTACAAATCAACCAGTCGATTATATTCTGTAATTCTACA
CACAGAGTAGAACTATTGGCAAAAAAGATTACAGAATTGGGCTATTCCTGCTTTTACATT
CACGCCAGAATGAAACAGGATTACAGAAACAGGGTATTTCATGATTTCCGACAAGGCTTG
TGTAGAAATCTTGTCTGCAGTGACTTATTTACTCGCGGAATTGACATTCAGGCAGTTAAT
GTGGTTATCAACTTCGACTTTCCTAAGATGTCAGAAACTTACCTTCACAGAATTGGAAGA
TCAGGACGATACGGTCATTTGGGATTAGCAATAAATTTAATCACTCACCATGATAGATTT
TCCTTAAAAACCATTGAAGATGAACTAAACACTGAAGTTAAACCAATTCCTGCTGTTATC
GACAAATCATTATATGTTGCGGAATTTTCTCAAGAGGAGGATGAGAAGAAAAACGGTGGC
ATTTAAAAAACTCGTAAAAGTTGTGTACATAAAATTATTGGCGGGTTCCACAAGTAGTAC
ATCATTCACAGCCTAATATCAAAATGTGAAACGTTAAAGTATCGTTGATTTGTAACTCAA
ATTAAAACCAATAGAAACCTGCATGGTGACCGCTAGCTATTGCTAAATTTCAATATTATG
AATTAGTTCAGTTCTGTTTCCTAACCTTAACTATGAGAAGAGACACTTGTATTACCGCTT
TACTCATGCAAATCAACATTAATGTTATTTTTAAGCAGATGTTCATTTTACTTGTGAATA
ATCTGAATGTTTTTTTAAGTGAATTGTTTGACATAATGTTCTACTTTTGTTAAAAGATTT
AAATGATTGTTCCATGAACAAGTAAAGTAACTCCCTTGTTCAACTTGATGTCCAGATTAA
AATTGCGCATTTGTTTCATTATTTTGTTTCATAGTTCTAAATGCTTAAAGTGAAACCACT
AACTTGACAAATCTGGACTTATTATAATGTTTTCAAACATACACTACATTATATAAAAAA
ATAGTTTTGCCAAATAATACGATTTCCTTGCATTAAATAAGCAAGGCCAGCATATATTTG
AAAGTATTAATACATGGATAAATTTTTACAAATTCACAATCACAGTTGCAAAACGAAGAG
TGCACCTCGATTTTTTTACTTGCACTTAAAAATGTTCTTCAATAGAATGTCAATATCTAG
AAACTCCACATTTGGAGTGATAGCAAATCATTCCTTGAGCCATGTAAGCGCGGACAATAT
GGTTAGGCATGTTTTGCTATTATGGTTGACGAATGCCTGCGCAAACAATTTTAAAATAGA
ATTTTAATTTTTATCTTCAATTGGAAAGTAAAATCCTCAAAGTTCATTTTCCAAATTTAA
TTAAATCAGTTCCACAAGAATTGCCCTGTATTGTTTCCACTTTCTGTTTTAAATAAAATC
TGCAATACAGTGTTTCTATTGTTGTTGTGCAGAATTAGTTCCCAAAAAATCAGACATCAT
TATTAAACACCAATTTAGATACTATTTAGAAATCAGCAAGGAACATTTATTTACAGTGCA
CACCCTAACCAGAATATGTCAATGGTACAATGCAATTGTTTCATAAACATTTGCAACATT
GATGCAAATCATTCCTATGCAGGCAAGTTCGGTATGAAATTGACTAAACTTAGAACGCTA
TCCATAATTAGAAAAAAATGGTTTTTAAAGAACTTTCCACAAACTTGATAGTGTGTAACC
TGATTTTAAAGGTTCAATGGCAATGCCTAGTTCTTTACAGAATACAGGTGGCCCAGATGC
GTTTTCTTCAATTACACCATCTGCGTAATACGAAACACAAGCATCACTTTGAATTGATTG
ATCAAGCTCTGTATCTTCTGTGACTGATTGGCCACTAATTTCTCGATTTTCATATTCAGT
TTCTTTAACATCTGTCATGTTTTTAAACTCTACACCAAAGATTGGATTGGCTGAATACAC
TTTATGCAGACTTTGAATTTCTTTTGCAGCTTCCTGTAGTTTTTCAATGGGATCAATTCG
AAAACCTAAAACATAATTACCACTTTGCCAAGATGTTTCAACAACCATTGCATATCCAAA
TTTTGAGTCTCTAATGCGAATTGCTTGTAT

InterProScan

SMART
Helicase_ATP-bd (IPR014001) - T[1-148] 1.2E-9
ProSiteProfiles
Helicase_ATP-bd (IPR014001) - T[1-134] 21.531
SUPERFAMILY
P-loop_NTPase (IPR027417) - T[2-286] 2.89E-63
Pfam
DEAD/DEAH_box_helicase_dom (IPR011545) - T[3-122] 9.6E-23
ProSiteProfiles
Helicase_C (IPR001650) - T[144-304] 22.942
CDD
Helicase_C (IPR001650) - T[145-273] 3.79417E-38
Pfam
Helicase_C (IPR001650) - T[158-265] 3.7E-27
SMART
Helicase_C (IPR001650) - T[184-265] 2.1E-27

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
IF4A3_HUMAN 37.71 % 223 5.2E-70
IF4A1_HUMAN 39.262 % 206 1.7E-63
DDX6_HUMAN 74.367 % 509 0





By clicking "SEND", you accept the terms of our Privacy Policy.

You may choose to prevent this website from aggregating and analyzing the actions you take here. Doing so will protect your privacy, but will also prevent the owner from learning from your actions and creating a better experience for you and other users.