Aniseed - Transcript Card

Transcript 'Moocci.CG.ELv1_2.S59...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S594976.g24254.01.t

Possible name(s)

PLCH1; PLCH2

Gene model

Moocci.CG.ELv1_2.S594976.g24254

Location

S594976 [35,773 / 40,478]

Sequences

Amino acid sequence

Length: 231

>Moocci.CG.ELv1_2.S594976.g24254.01.p
MRIIKNWIQRTFMNADKNGDGNLTIDEILPLMKKLNVNFSKKKTKALFKEIDSSCDSDGC
LSFKEFISFYRKVAERREIQTLIKEINGQGQDDFLTPIQFKCFLQYEQHMADVTDEMCTK
LINSFEPVKENRDKGVLGIEGFSNYLQSVYCGITDFDVNTQRLSFGCRSPVTTMRMDCPL
SEYYINSSHNTYLVGDQITSQSSVECYSRTLLSGCRCVEQLHVDVNYHSIR

Nucleotide sequence

Length: 696

>Moocci.CG.ELv1_2.S594976.g24254.01.t
ATGCGGATCATCAAAAACTGGATTCAAAGGACATTCATGAACGCTGATAAAAACGGCGAT
GGAAACTTAACCATTGATGAAATTTTACCTTTAATGAAAAAATTAAATGTCAATTTCTCA
AAAAAGAAAACGAAAGCCCTTTTCAAAGAGATTGATTCTTCTTGTGATTCGGACGGTTGC
TTGAGTTTTAAGGAATTCATAAGCTTCTATCGCAAAGTTGCGGAAAGGCGCGAGATTCAA
ACTCTTATCAAAGAAATAAATGGGCAAGGACAAGATGATTTTTTAACACCAATTCAGTTT
AAATGTTTTCTTCAATACGAACAACATATGGCAGATGTAACGGACGAAATGTGCACAAAA
CTTATTAACAGTTTTGAACCTGTTAAGGAAAACAGAGATAAGGGCGTGTTAGGGATAGAA
GGTTTCAGCAACTATCTCCAGAGTGTGTACTGTGGCATTACAGACTTCGACGTCAATACG
CAAAGGTTAAGCTTCGGCTGTCGCAGCCCTGTAACCACAATGCGTATGGATTGCCCGTTA
TCGGAATATTATATTAATTCTTCCCACAACACCTATCTCGTTGGCGATCAGATAACTAGT
CAAAGTTCAGTTGAATGTTACTCGCGGACGCTTCTGTCAGGCTGTCGCTGTGTTGAACAA
CTACATGTTGATGTAAATTATCATAGCATTCGATAA

InterProScan

ProSiteProfiles	EF_hand_dom (IPR002048) - T[3-38] 11.026 - T[39-76] 8.404
SUPERFAMILY	EF-hand-dom_pair (IPR011992) - T[5-156] 4.23E-33
PANTHER	PLC-eta1 (IPR028392) - T[6-219] 1.1E-61
PANTHER	PI-PLC_fam (IPR001192) - T[6-219] 1.1E-61
SMART	EF_hand_dom (IPR002048) - T[7-35] 0.2 - T[43-73] 3.7
ProSitePatterns	EF_Hand_1_Ca_BS (IPR018247) - T[16-28] .
Pfam	PLC_EF-hand-like (IPR015359) - T[69-149] 1.4E-12
Gene3D	PLC-like_Pdiesterase_TIM-brl (IPR017946) - T[172-228] 1.8E-19
Pfam	PLipase_C_PInositol-sp_X_dom (IPR000909) - T[176-219] 3.3E-17
SUPERFAMILY	PLC-like_Pdiesterase_TIM-brl (IPR017946) - T[176-219] 7.33E-20
ProSiteProfiles	PLipase_C_PInositol-sp_X_dom (IPR000909) - T[176-219] 20.659
PRINTS	PI-PLC_fam (IPR001192) - T[179-197] 3.1E-8 - T[205-225] 3.1E-8

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
PLCH2_HUMAN	44.037 %	184	2.75E-53
PLCD4_HUMAN	38.288 %	138	1.47E-37
PLCH1_HUMAN	43.578 %	163	3.04E-46