- Clone 'cibd040h04' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- Transcript 'KH2012:KH.C9.606.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S59...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S596564.g24329.01.t
Possible name(s)
ATRX; RAD54B; RAD54L2
Gene model
Location
S596564 [245 / 14,501]
Amino acid sequence
Length: 899
>Moocci.CG.ELv1_2.S596564.g24329.01.p
MAKSGKGGGCILAHCMGLGKTLQTVAFLNTILSSKHLHTFKTALVICPLGTVSNWGKEFS
MWLRKGKTWSEARSCIRVYNLNCNKFKTHYQRTEELIRWHKTGGVMLIGYGLYRYLFKPG
KSKGKRSLNETIAKTLRDPGPDILVCDEGHILKNSKSSIANLVDEIKTKRRIILTGTPLQ
NNLVEYHCMVNLIKPNLLGEITEFRNRFINPIENGQMIDSTARDVKLMKKRAHILHQLLS
GCVQRKDFTCLLSHLQPKFEYVISVQLTAQQIHMYKTFLGNFNNAMLQRRCLFRNFNTFL
LLCSHPYCLKLSEIRAEKRSNINSRSVLIAKASAYLEELDLSKKSISELKNIIKSKGGSL
HGCSERSDLVEVANKLLNPSGEVENKWFEALLPKQEDLAKALSCSNKMLLMISILEESSR
LGDKVVIFSQSLLTLSMIEVVLKNVTSGVERGVLEVKDTTYTKWYKNTDYFRLDGSTPCD
LREKWIKTFNNDREKRARLFLISTKAGGIGINLIGANRAIIFDASWNPSHDIQSIFRIYR
FGQKKPCYVYRLIAQGTMEEKIYERQVVKQSLSFRVVDEQQVDRHFSSKDIQELYRFEPT
QISNKSKTGRLAIPKDQLLANLFKIKSVEDAVVSYHEHDTLLDNQLEEELTAEERKAAWE
EYDEENKKKEKEQAANVLDPNSIYANVTPENLNLLSIECQRALTQIEQKEKLLVPESLSA
FYVKTKLARRDMPSDEINAAGVKSIFTKTIELHHLQILKSKIKKDLVEIRKWQTVRLLEP
KKVAPQVNKPFINLSSTSSGPRFPYQVNQPRPPHLNNGTNNPNLIRINARNYQRNQNHAT
YRPPNQQHPPQNNPNIRVNPQFPNLRPNNQPYTSGRFTYRNNMQQQQQPRYPAYRPKRM
Nucleotide sequence
Length: 3,062
>Moocci.CG.ELv1_2.S596564.g24329.01.t
TTAATTTAATATTCTTTTTAGGTGGATATTAACATAGTAAAATACTTAAAAGACCACCAA
GTGGAAGGAATTAGGTTTTTATGGGACAATTTAATCGAAAACGTTAAGATGGCGAAATCA
GGAAAAGGCGGAGGGTGCATCTTAGCTCACTGTATGGGGTTGGGAAAAACATTGCAAACA
GTGGCTTTTCTAAACACAATATTATCATCGAAACACTTGCACACTTTTAAAACTGCACTT
GTAATATGTCCGCTTGGAACGGTGTCAAACTGGGGGAAAGAATTCTCAATGTGGCTGCGG
AAAGGAAAAACATGGAGTGAAGCCAGGTCTTGCATCCGAGTTTATAACTTGAATTGTAAC
AAGTTTAAAACTCACTACCAAAGAACCGAAGAACTTATTAGATGGCACAAAACTGGTGGA
GTAATGTTAATTGGATATGGGTTATATCGCTATTTATTTAAGCCGGGAAAAAGCAAAGGA
AAACGGTCTCTAAATGAAACCATTGCTAAAACTTTAAGAGATCCAGGACCTGATATTTTA
GTTTGTGATGAAGGTCATATTTTAAAGAATTCAAAATCTTCAATAGCAAATCTAGTTGAT
GAAATAAAGACTAAGCGCCGTATAATTCTGACAGGAACACCGTTACAAAATAATCTGGTT
GAATACCATTGTATGGTCAACCTCATTAAACCCAACTTGTTGGGGGAAATAACTGAATTT
CGAAATCGTTTCATTAACCCGATAGAAAATGGTCAAATGATCGACTCAACTGCAAGGGAT
GTTAAGTTGATGAAGAAGCGGGCCCACATACTGCACCAGCTGCTGAGTGGTTGCGTCCAA
AGAAAAGATTTTACTTGTTTATTGTCTCACTTACAACCCAAATTTGAATATGTGATATCG
GTGCAACTTACTGCACAACAGATCCACATGTATAAAACATTTCTTGGAAATTTTAACAAC
GCCATGCTTCAACGTAGATGTTTGTTTCGTAACTTCAACACTTTTCTTCTACTGTGTTCT
CACCCATACTGTCTTAAATTATCGGAAATAAGGGCTGAAAAAAGGAGCAATATAAACAGT
CGCAGTGTTCTTATAGCCAAAGCCTCTGCCTATTTGGAAGAGTTGGATTTGTCGAAAAAA
TCAATATCAGAATTGAAAAACATTATTAAGTCAAAAGGTGGTTCGTTACATGGATGTAGT
GAAAGATCAGATCTGGTTGAAGTCGCAAACAAACTTCTTAACCCTTCTGGAGAAGTTGAA
AATAAATGGTTTGAAGCTCTTTTACCGAAACAAGAAGACCTTGCGAAAGCTTTGTCCTGT
AGCAACAAGATGTTGTTGATGATATCTATTCTGGAAGAGAGTAGTCGTCTTGGCGATAAA
GTTGTAATATTTTCTCAATCTTTGTTAACATTATCAATGATTGAAGTTGTTTTGAAAAAC
GTCACTTCAGGTGTAGAAAGAGGTGTTTTAGAAGTCAAAGACACAACATACACTAAATGG
TACAAGAATACCGACTACTTTCGTCTTGATGGCTCTACGCCTTGTGACTTACGTGAAAAG
TGGATCAAAACTTTCAATAATGATAGAGAAAAGCGAGCAAGATTGTTTCTTATTTCAACG
AAAGCTGGTGGAATCGGGATTAATCTTATTGGAGCAAACAGAGCGATTATATTTGATGCC
TCGTGGAATCCATCGCATGACATACAGTCAATTTTCCGGATTTATCGATTTGGACAAAAG
AAACCCTGTTACGTTTATAGGTTAATTGCACAGGGAACCATGGAAGAAAAAATTTATGAA
CGACAGGTTGTCAAACAATCGCTATCGTTTCGGGTAGTTGATGAACAACAAGTAGACCGT
CACTTTTCATCCAAAGACATCCAGGAACTGTACCGGTTTGAACCCACACAAATATCTAAC
AAATCCAAAACTGGAAGGTTGGCCATACCAAAAGATCAGCTTCTTGCTAACCTTTTTAAG
ATAAAAAGTGTGGAAGACGCTGTTGTAAGTTATCATGAACATGACACTCTTTTGGACAAC
CAGTTAGAAGAAGAATTAACTGCTGAAGAAAGGAAAGCTGCTTGGGAAGAGTATGATGAA
GAGAATAAGAAAAAAGAGAAAGAACAAGCTGCAAATGTCCTTGATCCTAACAGCATTTAT
GCAAATGTGACACCAGAAAATTTGAATCTCTTATCTATAGAATGTCAAAGAGCTTTGACA
CAAATCGAACAGAAAGAAAAACTTCTAGTGCCAGAGTCATTATCCGCATTTTATGTTAAA
ACAAAACTTGCAAGGAGAGATATGCCGTCTGATGAAATAAATGCTGCTGGAGTTAAGAGC
ATTTTCACTAAAACAATTGAATTGCATCACCTACAAATTTTAAAAAGTAAAATTAAGAAG
GATTTGGTGGAAATTAGAAAATGGCAAACTGTGAGACTATTGGAGCCAAAGAAAGTTGCT
CCTCAAGTAAATAAACCATTTATAAATCTTTCCTCAACAAGTTCAGGCCCCAGATTTCCC
TATCAAGTCAATCAACCACGACCACCACATTTAAACAATGGCACCAACAACCCAAATCTC
ATTCGGATTAATGCGAGAAATTACCAGAGGAATCAAAACCATGCCACATACAGACCACCG
AATCAGCAACACCCACCGCAAAATAACCCGAATATTAGAGTTAACCCACAGTTTCCTAAC
CTAAGACCGAATAATCAGCCATACACAAGCGGAAGATTTACCTATCGTAATAATATGCAA
CAGCAGCAGCAACCACGATATCCAGCATATCGCCCCAAGAGAATGTGAAACTTGCTTTTA
CAAAAATTTAAATATCCTCATGATAAATTAATATTAAACATGTGCATTGTACAATGTGCT
TGTTGCTTTCGTTTATATCTACATTTATTTTATTTACAAATATGAATGATTTTCATATAT
ATGACATTTTTTATTTATAAAATAAAATGTATGGAATTTTTTTCTGATCTTGTTTTCATT
CATTTTTTATTTCCATATTTTTACTGTGCTTTTCTCTCCAATAAACAAGACTCTGATCAC
AA
| SMART |
Helicase_ATP-bd (IPR014001) - T[1-204] 2.7E-8 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[1-196] 14.502 |
| Gene3D |
SNF2-like_sf (IPR038718) - T[1-245] 5.9E-63 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[4-245] 6.11E-39 - T[142-194] 7.23E-49 - T[397-589] 7.23E-49 |
| Pfam |
SNF2_N (IPR000330) - T[8-281] 8.8E-51 |
| Gene3D |
SAP_dom_sf (IPR036361) - T[333-385] 2.7E-5 |
| CDD |
Helicase_C (IPR001650) - T[403-550] 2.00538E-19 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[406-590] 13.447 |
| Pfam |
Helicase_C (IPR001650) - T[407-542] 8.3E-13 |
| SMART |
Helicase_C (IPR001650) - T[458-542] 1.6E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ATRX_HUMAN | 47.214 % | 597 | 0 |
| ARIP4_HUMAN | 38.162 % | 424 | 6.93E-130 |
| RA54B_HUMAN | 28.952 % | 214 | 7.68E-58 |