Aniseed - Transcript Card

Transcript 'Moocci.CG.ELv1_2.S60...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S602699.g24807.01.t

Possible name(s)

DHCR7; LBR; TM7SF2

Gene model

Moocci.CG.ELv1_2.S602699.g24807

Location

S602699 [9,627 / 14,708]

Sequences

Amino acid sequence

Length: 556

>Moocci.CG.ELv1_2.S602699.g24807.01.p
MRYQKKYNVGDKVMALWPGSKLYYPAELLEFVDNSFVKIRYEDGAEIKLAIKNIHKFRTK
SKSKSRSRSRSPGRKRSRSRSKSPSRTVLHKQEDTKMKTEVSTSKQSIHFTKKISKVKQE
ISNLTTIPSPTKEKIMPKTTFSFIDHILAIIGYMFVPAASLYFPYFCNNNSCYIETSIKD
LINSLPKQFADYFDLTASFTVIGYVLLQAIIYVLPLGKIIDGPLLLNGKKLKYRLNAANN
LVITTLIYSILVYNKYPVTLVYYRMLPITSMAIVVVFSLHVVSYVKSFWSAASDINPKGN
SGWHLVDMYTGREIVPRFGNMFDLKMYAYNIGITSVMLMNLIYLQVAYEKYGNIRIELLL
SCGLNIAYTIAMFFSNEEKNLYSYDIREEGFGFNFLFGVSVFYPIIYTMQPRYILEHPDL
PELHNFVLSLAIALFGVTLTYKSDRQKYFFRRNPHDPKITNLQSLPPSKKGGHRLLISGY
WGYLRHPNYLGEILITVALSFLCGTQRYFIWCYPAFVTILLTTRSLLDEKGCEKKHGKAW
EKYCKLVKYRVFPGIF

Nucleotide sequence

Length: 1,867

>Moocci.CG.ELv1_2.S602699.g24807.01.t
ATGAGGTATCAAAAGAAATACAATGTTGGTGACAAAGTAATGGCATTGTGGCCTGGAAGT
AAATTGTATTATCCTGCTGAATTGCTTGAATTTGTGGATAACAGTTTTGTAAAAATTCGT
TACGAAGATGGTGCGGAAATAAAACTTGCAATAAAAAATATACATAAGTTTAGAACAAAA
TCAAAGTCCAAAAGTCGTTCTCGATCAAGATCACCTGGCAGAAAAAGGTCTCGGTCCAGG
TCAAAATCTCCATCAAGAACAGTACTGCACAAACAAGAAGATACTAAAATGAAGACAGAA
GTCTCTACTAGTAAACAATCCATTCATTTCACCAAAAAAATATCCAAAGTAAAGCAAGAA
ATATCAAATTTAACAACAATCCCTTCTCCGACAAAAGAGAAGATTATGCCAAAGACAACA
TTCAGCTTTATTGATCATATACTGGCAATAATCGGATACATGTTTGTACCAGCAGCTTCC
CTTTACTTCCCATATTTCTGCAATAACAACTCTTGTTACATAGAGACATCAATAAAGGAT
TTGATAAACAGTTTACCAAAGCAGTTTGCTGATTATTTTGACTTAACAGCTAGCTTCACT
GTTATTGGATATGTTCTTCTTCAAGCAATTATTTATGTACTTCCGCTTGGGAAAATCATA
GACGGTCCTTTATTATTGAATGGAAAAAAACTTAAATACAGACTAAATGCTGCCAATAAC
CTGGTCATCACTACTTTGATATACAGCATACTAGTGTATAACAAATACCCTGTCACTTTG
GTCTATTACAGAATGCTCCCTATCACAAGCATGGCTATTGTAGTTGTTTTCTCACTGCAT
GTTGTGAGCTATGTCAAGTCATTTTGGAGTGCTGCTTCGGATATAAATCCCAAAGGAAAT
AGTGGTTGGCATTTGGTGGATATGTATACCGGACGTGAAATTGTACCCCGATTTGGAAAT
ATGTTTGATTTAAAAATGTATGCTTACAATATTGGCATTACATCTGTGATGCTCATGAAC
TTAATATACTTGCAAGTAGCATATGAAAAATATGGGAATATTCGTATTGAGCTGCTATTA
TCATGTGGACTTAATATTGCATATACCATTGCAATGTTTTTTTCAAACGAGGAGAAAAAC
TTATATTCATATGATATTCGAGAAGAAGGCTTTGGATTTAACTTCCTGTTTGGAGTCTCA
GTTTTCTATCCCATAATATATACAATGCAACCAAGGTACATTTTGGAGCACCCAGATCTA
CCAGAATTGCATAACTTTGTGTTGAGTTTAGCAATAGCTTTATTTGGTGTAACTTTGACT
TACAAATCTGATCGACAAAAATACTTCTTCAGACGAAATCCACATGACCCCAAAATAACA
AACTTACAAAGCTTACCACCTTCCAAAAAAGGGGGTCACAGACTTTTGATTTCCGGATAC
TGGGGTTATTTAAGGCACCCAAACTACCTAGGAGAGATTCTAATTACTGTGGCTTTAAGT
TTCCTCTGTGGTACACAACGCTACTTTATTTGGTGTTATCCTGCTTTTGTAACTATACTT
TTAACCACTCGGAGCTTGTTGGATGAAAAAGGCTGTGAAAAGAAACACGGAAAAGCATGG
GAAAAATATTGTAAACTTGTTAAGTACAGAGTTTTTCCGGGTATATTTTAGGGATATATA
TAATACAACATTTTATTTTTATAAATAAAGTTGAATACCAGTGACTCATTTATTTCAAAA
AAGACTTTTATACTTCTTTATTAAAAGATATTTTAAATGTATTTTTTGTGAATAATTAAA
GAAACATGCTTGGATTCAAGCTGTTCTTTGAATTAATAATTGTTATACCTATTACATTCT
AAAAATG

InterProScan

Pfam	Lamin-B_rcpt_of_tudor (IPR019023) - T[4-54] 5.1E-12
SMART	Tudor (IPR002999) - T[5-62] 0.0031
Pfam	Ergosterol_biosynth_ERG4_ERG24 (IPR001171) - T[186-556] 4.8E-73
ProSiteProfiles	3-oxo-5_a-steroid_4-DH_C (IPR001104) - T[462-526] 9.614

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
DHCR7_HUMAN	27.483 %	145	8.67E-38
ERG24_HUMAN	32.571 %	199	2.96E-58
LBR_HUMAN	27.707 %	227	1.04E-66