- Transcript 'Moocci.CG.ELv1_2.S61...' >
- Transcript 'Moocci.CG.ELv1_2.S46...' >
- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Transcript 'Moocci.CG.ELv1_2.S29...' >
- Transcript 'Moocci.CG.ELv1_2.S60...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S604840.g25024.01.t
Possible name(s)
HDAC4; HDAC7; HDAC9
Gene model
Location
S604840 [49,181 / 58,014]
Amino acid sequence
Length: 1,250
>Moocci.CG.ELv1_2.S604840.g25024.01.p
MLHYIMQGADNKQLNNLLEIYKRLSNNNQETSNKNLQEEDCAMATDLARAAVAGSMSEQY
QHLLALRQQQFDEQVLLNFQQRNTVAIQRQLQEHLKLTLQKQNEQDKLHPMEERHHQRSE
LTQAVLNKDNDSKSANASNAVKQHLQKFVIERQKGKQLDNMIDRNRPMGWNPNLNVNGLH
EIAAPYPMFFDKRNSFPLRKTASEPNLKVPSKIKQNLTLDRRNSPLVTRNSAEVRSELAN
KLKRKMNSAEQEVTNSAPNSGPSSPLNNSHGEGGRTTNTEVDLQDYQRPLRLMGPMTQGR
DLYTSPSLPNLSLGITQNKTPQESRLGQGVVMYQDPNLQRLDPNLRRLAVTRTASLPGPL
IGLPGFHVQGLSEAQLAAVKFFQQQQQQLLAEMNAGNDQSPGPIRHSAVSRPHKVLSRTH
SAPTTTPQLHMQQLHRKRFEQQKMMNQQHHKHLPHSLPGIVPSTNEYYQRLPTHKEATAS
ETNKPPARSRVHLAASPPPTHPSAISSTTAAALQSHLRQSKMHGSFPILAQKSSKRSTSP
PLGSAMDHSPLSPPESSARSVIVSAPSSNESQRRVSSDQELEKEDSKTPTKTMHDEANHD
LSTLSPLLAQKKLAAMAVNDEGKHSRRSMLDGFHRPLTRTQSSPAVSFTQKTPNKEYKFT
TCLAYDPIMLRHGCACGDPHAEHAGRLKEIWSRLTNQNLVSRCESIEPRKATMEELQLAH
TYEHTLRYGASPLARQQSVLRDKFIVLPCGGLGVNNNIDIDTVWNEQDTINAARMAVGLT
VDLAMLVANGNVKNGFAVVRPPGHHAEKNLAMAFCYFNAVAVAARKLQNTLPDKVRRVLI
VDWDAHHCNGTQDIFYEDPSVLVVSIHRYDEGNFFPGTGAPEETGSGTGVGFNINIGFSG
GVDPEIGDAEYLSAFRSIVMPIAEEFKPDFVFISAGFSASDGHPPTLGGYKVTPQCFSYL
TKLLSNLAGGNLVMALEGGFELGPLCDCVEACVRTLLSDKSLDHVSSQLPRSSVEKLPCE
TSNRSLNKIGRIQERYWSGLKRSSSTIRLSHEQWLKHLHEDVNCRAMASLTVEQRKLKPT
PDLEKELGKARVIQSSNLYPEPHHINKPQDDEGESKLVIVTDETDVHYDEMSATSSPVDV
VGMSSPSPPTSTSPVPSPGHTLQASSKSGIASQDNIVPDSSQEAMEEDVIDNKDVMIKLR
RVNHDEMKVVITIHGHQNEINFTVLAFSDIKIFLRYCCYIPNCKGSNKRS
Nucleotide sequence
Length: 3,817
>Moocci.CG.ELv1_2.S604840.g25024.01.t
TTTAATTTAGAACAAAATGTTAAGAATAGATAATATACATCACAGTTAATTAGACAGACT
TGAAATGTTGCACTATATAATGCAAGGCGCAGATAACAAGCAGCTGAACAATTTGCTCGA
GATATATAAAAGATTGTCTAACAATAATCAAGAAACTTCAAACAAAAACTTGCAAGAAGA
AGATTGTGCTATGGCAACTGATCTAGCACGGGCGGCCGTTGCAGGAAGCATGAGTGAGCA
GTATCAGCACTTGTTAGCGCTACGGCAACAACAATTTGATGAACAGGTTTTATTAAATTT
TCAACAAAGAAATACAGTTGCGATTCAACGTCAGTTGCAAGAGCATTTGAAGTTGACGCT
GCAGAAACAAAATGAACAAGATAAACTTCACCCCATGGAAGAACGCCACCATCAAAGAAG
CGAATTGACACAAGCTGTTCTCAATAAAGATAATGACAGCAAAAGTGCTAACGCTTCGAA
TGCTGTAAAACAACATTTGCAAAAGTTTGTAATAGAGCGGCAGAAAGGAAAACAATTGGA
TAACATGATCGATAGAAACAGACCGATGGGATGGAATCCGAATTTAAACGTTAATGGCTT
ACATGAAATAGCTGCACCTTATCCTATGTTTTTCGATAAGAGAAATAGTTTTCCTCTCAG
AAAAACAGCATCTGAACCAAATTTAAAAGTTCCATCAAAAATCAAGCAAAATTTAACGTT
GGATCGACGGAATTCCCCATTGGTTACACGAAATTCTGCAGAAGTTAGATCAGAACTTGC
TAACAAATTAAAACGAAAAATGAATAGTGCTGAACAAGAAGTTACAAATAGTGCACCAAA
CTCAGGACCAAGTTCACCTTTGAATAACTCTCATGGAGAAGGTGGGAGAACAACAAATAC
AGAGGTTGATCTACAAGATTATCAACGTCCCCTAAGGTTGATGGGTCCAATGACCCAGGG
TCGTGACCTTTATACATCCCCCTCTTTACCGAATTTATCGTTAGGAATAACACAAAACAA
GACACCGCAAGAGAGTCGTTTGGGCCAAGGTGTGGTCATGTACCAAGACCCGAATTTGCA
ACGGCTAGACCCAAACCTACGTCGATTAGCCGTAACAAGAACAGCTTCCTTGCCAGGGCC
TTTGATTGGATTACCTGGTTTTCATGTCCAAGGTTTGTCAGAAGCTCAACTTGCAGCCGT
AAAATTCTTTCAGCAACAACAACAACAACTCCTTGCTGAAATGAATGCAGGTAATGATCA
GTCGCCAGGTCCTATTCGCCATAGTGCTGTTTCAAGACCCCACAAAGTTTTGAGCCGAAC
TCACTCAGCCCCCACCACAACGCCCCAGCTCCATATGCAACAGCTTCATCGGAAGCGGTT
TGAGCAGCAAAAGATGATGAACCAACAACACCACAAGCACCTGCCCCACTCCTTGCCTGG
AATCGTTCCATCAACTAATGAATATTACCAGCGTCTTCCAACTCACAAAGAAGCTACGGC
TTCCGAAACAAACAAACCTCCTGCAAGGTCTCGGGTTCACCTTGCGGCTTCCCCTCCCCC
TACCCACCCCTCTGCAATATCTAGCACAACTGCTGCAGCACTTCAATCTCACCTCCGTCA
ATCAAAAATGCACGGATCATTTCCTATATTGGCACAAAAGTCGTCCAAGCGTTCAACTTC
CCCACCACTTGGCTCCGCCATGGACCATTCACCATTATCTCCCCCTGAAAGCTCTGCAAG
ATCAGTGATAGTTTCTGCTCCATCGTCCAATGAAAGCCAAAGGCGAGTTTCAAGTGACCA
AGAATTAGAGAAAGAGGATTCCAAAACCCCAACCAAAACTATGCACGATGAGGCTAATCA
CGATTTATCTACTTTGTCACCATTGTTAGCACAAAAGAAACTGGCTGCAATGGCTGTTAA
TGATGAAGGCAAGCATTCACGAAGATCAATGCTGGATGGATTTCATCGACCATTAACACG
TACACAAAGTTCACCTGCAGTATCATTTACTCAAAAAACACCTAACAAAGAATATAAGTT
TACCACTTGTCTTGCATATGATCCAATCATGTTGCGGCATGGCTGTGCATGCGGTGACCC
ACATGCAGAGCATGCAGGAAGACTAAAAGAAATATGGTCTCGTCTTACCAATCAAAACCT
CGTTAGTAGATGTGAATCAATTGAGCCCCGGAAAGCTACAATGGAAGAGTTGCAATTAGC
ACATACTTACGAACACACGTTAAGATATGGCGCATCACCACTTGCCCGACAACAATCAGT
TTTGCGAGACAAGTTCATAGTACTTCCATGTGGTGGACTTGGTGTAAACAACAACATTGA
CATTGATACAGTGTGGAATGAACAAGACACCATAAATGCAGCTCGAATGGCTGTTGGTTT
GACGGTCGACCTTGCAATGTTGGTTGCAAATGGTAATGTCAAAAATGGATTTGCTGTTGT
CCGACCACCTGGCCATCATGCAGAGAAAAATCTTGCAATGGCCTTTTGTTATTTTAATGC
AGTGGCTGTTGCTGCTCGCAAGCTACAGAATACCCTTCCCGACAAAGTAAGGCGAGTTTT
GATTGTAGATTGGGATGCTCATCACTGCAATGGTACACAGGACATTTTCTATGAGGATCC
TTCTGTACTTGTTGTATCAATCCATCGATATGATGAAGGAAACTTTTTTCCAGGGACAGG
CGCACCTGAAGAGACTGGCAGCGGAACAGGTGTTGGTTTCAACATCAACATTGGCTTCAG
CGGTGGTGTTGATCCTGAGATCGGCGATGCAGAATATTTGTCTGCATTCAGGTCAATTGT
CATGCCCATTGCTGAAGAGTTTAAGCCCGATTTTGTTTTTATTTCGGCTGGATTTTCTGC
ATCTGATGGACATCCCCCTACTTTAGGGGGTTATAAAGTTACTCCTCAATGTTTTAGCTA
CTTGACAAAACTATTGTCAAATCTTGCTGGTGGTAATTTAGTTATGGCATTGGAAGGTGG
TTTTGAGCTTGGACCATTATGTGACTGTGTTGAAGCTTGTGTTCGTACTCTCCTATCCGA
TAAATCCCTTGACCATGTATCATCCCAATTACCAAGATCTTCAGTCGAAAAGCTCCCATG
TGAAACATCGAATCGCTCATTAAATAAAATTGGACGAATTCAAGAGCGTTATTGGAGTGG
GTTAAAGCGTTCGTCCTCCACAATTCGTCTGTCGCATGAGCAGTGGCTCAAACACTTGCA
CGAAGACGTAAACTGCAGGGCCATGGCGAGTCTCACAGTTGAACAACGGAAACTAAAACC
AACTCCGGATCTTGAAAAAGAATTGGGAAAAGCAAGAGTAATTCAATCCAGCAATCTGTA
TCCCGAGCCACATCACATCAACAAACCACAAGATGATGAAGGCGAGTCAAAACTAGTGAT
AGTAACAGACGAAACAGATGTCCATTATGATGAAATGAGTGCAACATCCTCTCCTGTAGA
TGTTGTTGGGATGTCGTCTCCAAGCCCTCCAACCTCAACATCACCAGTGCCCTCTCCTGG
ACACACCTTGCAAGCATCTTCGAAGTCTGGAATTGCTAGCCAAGATAATATTGTTCCTGA
TTCATCACAAGAGGCGATGGAAGAAGATGTAATTGATAATAAGGATGTTATGATAAAGCT
GCGTCGAGTGAACCACGATGAGATGAAGGTTGTAATAACTATCCATGGACATCAAAATGA
AATTAACTTCACTGTTCTTGCATTTTCCGATATTAAGATTTTCTTGAGATATTGCTGCTA
CATTCCAAATTGTAAAGGAAGTAATAAAAGAAGTTAG
| PIRSF |
Histone_deAcase_II_euk (IPR017320) - T[33-1088] 3.2E-218 |
| PANTHER |
His_deacetylse (IPR000286) - T[114-318] 3.8E-228 - T[589-1037] 3.8E-228 |
| Gene3D |
His_deacetylse_dom_sf (IPR037138) - T[653-1065] 1.5E-144 |
| SUPERFAMILY |
Ureohydrolase_dom_sf (IPR023696) - T[658-1038] 1.49E-100 |
| Pfam |
His_deacetylse_dom (IPR023801) - T[680-995] 1.1E-74 |
| PRINTS |
His_deacetylse (IPR000286) - T[801-824] 8.3E-12 - T[837-852] 8.3E-12 - T[928-938] 8.3E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HDAC4_HUMAN | 53.407 % | 489 | 2.62E-153 |
| HDAC9_HUMAN | 54.005 % | 439 | 1.47E-135 |
| HDAC7_HUMAN | 44.043 % | 460 | 4.02E-144 |