- Transcript 'Moocci.CG.ELv1_2.S61...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S610834.g25506.01.t
Possible name(s)
LRFN5; LRRC4B; LRRN2
Gene model
Location
S610834 [13,293 / 14,902]
Amino acid sequence
Length: 520
>Moocci.CG.ELv1_2.S610834.g25506.01.p
MFHLTLTIFLWTCGIKFSLSTSHINECDTICAGKTCGYGNCNVWHEERNNAIFIKGNNSD
NKTNDALIVCKKAFSEHTVGVTRLTNFEVESIESCRILKNSLLQRHITTADKVTVSNLGK
FTKNFTDIIFMAYVPLSASFLNFSQNIVNVTLEISTPFPNLQSMILSENHIVMLDIQTSF
PKLTHLRIGSNPLIYIFGLSRLDALEDLKILNSNLKPVMLSQLPSTLINLTLENAINFQD
TEDIYFPYLNSLVNLNLRKSEISNIDKISEKMFVKMPKLETLDLSSNRIRRIHSKTFSRN
LHESLIKLLLNNNQITYLGKNSFADFKKLKHLDLRKNLLQHIPILSLSITHQRVVRDTSE
LLKNNSSLQSLRNTSLPDINLNHNPWSCDCMQLEYHSWLISTNQNRSNLDVECHNPPKLY
GRYLTDLKSSELKCLDVTVEGYNTTGNEFEDKVLYCNVTGAPMPIPYWISPINETISAED
SDHDTKKYKISPDGTSLTILSLAYFDTGTYSDSSFTGRRS
Nucleotide sequence
Length: 1,563
>Moocci.CG.ELv1_2.S610834.g25506.01.t
ATGTTCCATCTGACCTTGACAATTTTTCTTTGGACATGTGGAATAAAATTTTCATTATCA
ACATCGCATATAAATGAATGTGATACAATATGTGCTGGAAAAACCTGCGGTTATGGCAAT
TGTAATGTTTGGCATGAAGAACGTAACAACGCCATATTTATAAAAGGAAATAATTCAGAC
AATAAAACAAATGATGCTCTTATTGTTTGTAAGAAAGCATTTTCTGAGCATACTGTTGGT
GTCACAAGATTGACGAATTTCGAAGTCGAGTCAATTGAAAGTTGTCGCATACTAAAGAAC
AGTTTACTGCAACGTCATATAACAACAGCAGATAAAGTGACTGTTTCAAATCTTGGTAAA
TTTACTAAAAATTTTACCGATATTATTTTTATGGCTTATGTACCACTTAGTGCATCATTT
TTAAACTTTTCACAAAATATTGTGAATGTTACATTAGAAATTTCAACCCCATTTCCTAAC
TTACAGTCGATGATTCTGTCGGAAAATCATATTGTTATGCTGGACATACAGACAAGTTTT
CCCAAACTTACACATTTAAGAATTGGCTCAAATCCACTAATTTATATTTTTGGCTTAAGT
AGATTAGATGCTCTTGAAGATTTAAAAATTTTGAACAGCAATTTAAAACCTGTTATGTTA
TCACAATTACCAAGCACCCTGATTAATTTAACTTTGGAAAACGCCATAAATTTTCAAGAT
ACAGAAGATATATACTTTCCCTATTTGAATTCCCTTGTAAATTTGAATTTGAGAAAAAGT
GAAATTTCTAACATTGATAAAATTAGTGAGAAAATGTTTGTAAAAATGCCAAAGCTGGAA
ACATTAGATCTTTCAAGCAATCGTATCAGAAGAATTCATTCTAAAACCTTTTCACGAAAT
CTTCATGAATCGCTAATAAAATTATTGCTAAACAATAATCAGATAACTTATCTAGGAAAA
AATTCTTTTGCTGATTTTAAAAAACTTAAGCATTTGGATCTCAGAAAAAATTTGCTCCAG
CACATACCAATACTATCATTATCTATAACCCATCAAAGAGTAGTAAGGGACACAAGTGAA
TTGTTAAAAAATAATTCATCGTTACAAAGTTTACGTAATACATCATTGCCTGATATTAAC
TTGAACCATAACCCATGGTCTTGCGACTGTATGCAATTAGAATACCATTCATGGCTAATA
AGTACAAATCAAAATAGGTCTAACTTAGATGTAGAGTGTCATAATCCGCCAAAATTATAC
GGTCGGTATTTAACCGATTTAAAATCTTCCGAGTTAAAATGTCTTGACGTTACTGTTGAA
GGGTATAATACAACTGGAAATGAATTTGAAGATAAAGTATTGTATTGTAATGTTACCGGT
GCCCCTATGCCAATCCCATACTGGATTTCCCCCATTAACGAGACGATATCTGCCGAAGAT
TCGGACCATGACACTAAAAAATACAAGATCTCACCTGATGGCACATCACTTACCATTCTG
TCTTTGGCTTATTTTGATACTGGTACTTACAGTGATAGTTCGTTTACAGGTAGAAGGAGC
TAG
| Gene3D |
LRR_dom_sf (IPR032675) - T[20-439] 2.4E-39 |
| SMART |
Leu-rich_rpt_typical-subtyp (IPR003591) - T[158-181] 80.0 - T[276-299] 4.9E-4 - T[303-325] 28.0 - T[326-347] 45.0 |
| ProSiteProfiles |
Leu-rich_rpt (IPR001611) - T[160-181] 5.263 - T[182-203] 5.987 - T[251-272] 5.61 - T[278-299] 8.351 - T[304-325] 6.126 - T[328-349] 7.581 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[252-298] 5.9E-7 |
| SMART |
Cys-rich_flank_reg_C (IPR000483) - T[384-435] 1.6E-4 |
| Gene3D |
Ig-like_fold (IPR013783) - T[440-511] 4.9E-5 |
| SUPERFAMILY |
Ig-like_dom_sf (IPR036179) - T[444-511] 3.08E-6 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRC4B_HUMAN | 26.276 % | 87 | 6.21E-18 |