- Transcript 'Moocci.CG.ELv1_2.S61...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S618812.g26156.01.t
Possible name(s)
PAX3; PAX6; PAX7
Gene model
Location
S618812 [38,474 / 41,447]
Amino acid sequence
Length: 165
>Moocci.CG.ELv1_2.S618812.g26156.01.p
MMHRPGNFRPTFPLEGQGRVNQLGGVFINGRPLPNHIRHKIVEMAAHGVRPCVISRQLRV
SHGCVSKILCRYQETGSIKPGAIGGSKPKPNNSDIDKKIEEYKKENPSMFSWEIRDKLIK
ENICERSSAPTVSAISRILRAKGCDISNESAYNDLISSSIYVNVN
Nucleotide sequence
Length: 541
>Moocci.CG.ELv1_2.S618812.g26156.01.t
ATCAGGTATACAGAGGTAAAAACTGAATAAACATTTGTGAAGAATGATGCACAGACCTGG
AAATTTTAGGCCAACTTTTCCACTTGAAGGCCAGGGGCGAGTAAATCAGCTTGGGGGAGT
GTTTATAAACGGCCGACCTTTGCCGAATCATATTCGCCACAAAATCGTAGAAATGGCGGC
GCATGGTGTACGACCTTGCGTTATCAGTCGTCAACTTCGCGTCTCTCATGGATGTGTCAG
TAAAATCCTTTGCAGATACCAAGAAACTGGTTCGATAAAACCGGGTGCAATTGGAGGAAG
CAAACCCAAACCCAACAATAGCGATATCGACAAAAAGATCGAGGAATATAAAAAAGAAAA
TCCTTCGATGTTCAGTTGGGAAATCAGAGACAAACTCATAAAGGAAAATATTTGCGAAAG
AAGTTCTGCACCAACTGTAAGTGCTATCAGCAGAATTCTGCGCGCAAAAGGATGCGATAT
TTCCAACGAATCAGCTTATAACGATCTCATTAGTTCCAGTATTTATGTAAATGTTAATTA
G
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[16-84] 2.6E-39 - T[85-148] 1.7E-27 |
| SMART |
Paired_dom (IPR001523) - T[16-140] 4.9E-84 |
| CDD |
Paired_dom (IPR001523) - T[16-143] 9.13491E-79 |
| Pfam |
Paired_dom (IPR001523) - T[16-140] 2.3E-69 |
| ProSiteProfiles |
Paired_dom (IPR001523) - T[16-142] 57.815 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[18-143] 3.42E-38 |
| PRINTS |
Paired_dom (IPR001523) - T[20-35] 2.8E-37 - T[38-56] 2.8E-37 - T[58-75] 2.8E-37 - T[76-93] 2.8E-37 |
| ProSitePatterns |
Paired_dom (IPR001523) - T[50-66] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAX5_HUMAN | 66.142 % | 186 | 3.74E-58 |
| PAX7_HUMAN | 76.056 % | 221 | 6.1E-71 |
| PAX3_HUMAN | 76.159 % | 233 | 1.14E-75 |