- Molecular Tool 'Tox MO 2nd (Satou lab)' >
- Transcript 'Phfumi.CG.MTP2014.S5...' >
- Clone 'AHC0AAA57YM23' >
- Transcript 'Cisavi.CG.ENS81.R5.1...' >
- Transcript 'Moocci.CG.ELv1_2.S61...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S618812.g26156.02.t
Possible name(s)
PAX3; PAX6; PAX7
Gene model
Location
S618812 [38,474 / 50,863]
Amino acid sequence
Length: 665
>Moocci.CG.ELv1_2.S618812.g26156.02.p
MMHRPGNFRPTFPLEGQGRVNQLGGVFINGRPLPNHIRHKIVEMAAHGVRPCVISRQLRV
SHGCVSKILCRYQETGSIKPGAIGGSKPKPNNSDIDKKIEEYKKENPSMFSWEIRDKLIK
ENICERSSAPTVSAISRILRAKGCDISNESENHSNSDGGDAEDRSVDGCQDSDCESEPDL
PLKRKQRRSRTTFSADQLEELERCFERTHYPDIYTREELAQRTRLTEARVQVWFSNRRAR
WRKQMAAQQLPGLHHHPHLQHHIGYHSIAAAGMSAHNYMLQAAAAHQHAVQQHVPQQSTA
LSHVASGQHQHLGHPHINQSAGLGAHPDNSYIPTSTHESSLSQRHPAHGMHSLTSPLHHH
PYSGPTAGTMRYEGSHDVALNAAAAGYGLVGAAAAAARYQFPTAASFGDNYHHHAISPDN
TLYAGNSNPNENLPSSSTDNQENSEFRNRSASNVGVNASVRHPGESRSPSSSSSGSLSRQ
HQQRHGLSLVNANQNTSGSGVVDVSGSTEINSSPPVSSEDNHVNNLATDSYPQQIGAHSF
STHVMDQSAPSSNGNPAAYPVGNPLLQRESTASSASVAPTYPGTSLSDGYPETSSSLTTA
QYHPHNPFASCQYSSYGQAAEYGSSAGIAALRMKSREHSAALGLISVGGTGETLACRLTT
NLKRI
Nucleotide sequence
Length: 2,041
>Moocci.CG.ELv1_2.S618812.g26156.02.t
ATCAGGTATACAGAGGTAAAAACTGAATAAACATTTGTGAAGAATGATGCACAGACCTGG
AAATTTTAGGCCAACTTTTCCACTTGAAGGCCAGGGGCGAGTAAATCAGCTTGGGGGAGT
GTTTATAAACGGCCGACCTTTGCCGAATCATATTCGCCACAAAATCGTAGAAATGGCGGC
GCATGGTGTACGACCTTGCGTTATCAGTCGTCAACTTCGCGTCTCTCATGGATGTGTCAG
TAAAATCCTTTGCAGATACCAAGAAACTGGTTCGATAAAACCGGGTGCAATTGGAGGAAG
CAAACCCAAACCCAACAATAGCGATATCGACAAAAAGATCGAGGAATATAAAAAAGAAAA
TCCTTCGATGTTCAGTTGGGAAATCAGAGACAAACTCATAAAGGAAAATATTTGCGAAAG
AAGTTCTGCACCAACTGTAAGTGCTATCAGCAGAATTCTGCGCGCAAAAGGATGCGATAT
TTCCAACGAATCAGAAAACCATTCCAACTCAGACGGAGGTGATGCTGAAGATAGATCAGT
GGACGGATGTCAGGACTCAGACTGCGAATCAGAACCAGATCTTCCTTTAAAGAGGAAGCA
AAGACGAAGCAGGACTACTTTTTCCGCTGATCAACTTGAAGAACTGGAAAGATGCTTTGA
AAGAACACATTATCCTGATATTTACACAAGAGAAGAACTAGCACAAAGAACAAGATTAAC
GGAGGCTAGAGTACAGGTATGGTTTAGCAACAGACGAGCAAGGTGGCGTAAACAAATGGC
TGCACAGCAACTTCCAGGATTACATCACCATCCTCATCTTCAACACCATATTGGATACCA
TTCCATAGCAGCTGCAGGAATGTCGGCTCACAATTACATGCTTCAAGCTGCCGCCGCCCA
TCAACACGCCGTACAACAGCATGTACCACAACAATCAACAGCGCTTTCCCACGTCGCTAG
TGGGCAGCACCAACACCTGGGACATCCGCATATTAATCAATCTGCCGGTCTTGGTGCGCA
CCCTGACAATTCATACATTCCCACTTCGACTCATGAATCATCACTTTCCCAACGCCATCC
AGCTCATGGAATGCATTCTTTAACGTCACCTCTTCATCACCATCCATATTCTGGTCCAAC
TGCAGGAACAATGCGTTATGAAGGATCACATGATGTTGCCCTAAACGCGGCTGCAGCAGG
TTATGGCCTCGTCGGAGCTGCGGCCGCGGCGGCAAGGTATCAGTTCCCAACGGCAGCATC
ATTTGGTGACAACTACCACCATCACGCAATCTCTCCCGACAACACATTATATGCTGGAAA
TTCTAACCCCAACGAAAACCTACCAAGTTCGTCAACTGATAATCAAGAAAATAGCGAATT
TCGAAATCGATCTGCTAGCAACGTGGGTGTGAATGCGTCAGTAAGACATCCTGGAGAAAG
CAGGTCACCATCTTCTTCATCATCTGGATCTTTATCAAGGCAACATCAGCAAAGACACGG
ACTTTCATTAGTAAACGCCAACCAGAACACGTCTGGTTCAGGAGTAGTTGACGTATCAGG
ATCGACAGAAATCAATTCCTCCCCTCCCGTTTCGAGCGAAGACAACCACGTAAACAATCT
CGCGACAGATTCTTATCCACAACAAATTGGAGCACATTCATTTTCTACTCATGTTATGGA
CCAATCAGCTCCCAGCTCTAATGGAAATCCTGCAGCTTATCCAGTAGGAAATCCACTTCT
TCAGAGAGAGTCTACTGCTTCATCTGCAAGTGTTGCTCCCACATACCCAGGAACAAGTTT
ATCGGATGGATATCCTGAAACCTCGTCATCCTTAACAACTGCTCAATATCATCCGCATAA
CCCGTTTGCGTCCTGCCAGTACTCATCATACGGACAAGCGGCGGAGTATGGTAGTTCGGC
GGGAATCGCAGCTCTTCGGATGAAATCGCGGGAACATAGCGCCGCTTTGGGGCTGATCAG
CGTCGGCGGAACCGGCGAAACTCTTGCCTGCCGTCTAACGACCAACTTGAAAAGAATTTG
A
| ProSiteProfiles |
Paired_dom (IPR001523) - T[16-142] 57.815 |
| SMART |
Paired_dom (IPR001523) - T[16-140] 4.9E-84 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[16-84] 2.9E-38 - T[85-148] 1.7E-26 |
| CDD |
Paired_dom (IPR001523) - T[16-143] 1.89829E-77 |
| Pfam |
Paired_dom (IPR001523) - T[16-140] 5.5E-68 |
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[18-143] 1.19E-36 - T[179-250] 4.6E-27 |
| PRINTS |
Paired_dom (IPR001523) - T[20-35] 2.7E-35 - T[38-56] 2.7E-35 - T[58-75] 2.7E-35 - T[76-93] 2.7E-35 |
| ProSitePatterns |
Paired_dom (IPR001523) - T[50-66] . |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[184-244] 21.135 |
| SMART |
Homeobox_dom (IPR001356) - T[186-248] 8.7E-28 |
| Pfam |
Homeobox_dom (IPR001356) - T[187-243] 1.1E-22 |
| CDD |
Homeobox_dom (IPR001356) - T[187-245] 2.19939E-26 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[219-242] . |
| ProSiteProfiles |
OAR_dom (IPR003654) - T[626-639] 10.752 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PAX7_HUMAN | 68.478 % | 374 | 1.01E-122 |
| PAX3_HUMAN | 68.345 % | 385 | 2.1E-127 |
| PAX6_HUMAN | 42.462 % | 251 | 1.42E-76 |