- Region 'REG00001198' >
- Region 'REG00000710' >
- Region 'REG00000707' >
- Transcript 'Moocci.CG.ELv1_2.S62...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S621479.g26440.01.t
Possible name(s)
ITGA11; ITGAD; ITGAX
Gene model
Location
S621479 [174 / 7,322]
Amino acid sequence
Length: 493
>Moocci.CG.ELv1_2.S621479.g26440.01.p
MSKMRILICLLQVCGSQWEYACPAAVMKKRMVGRCKIINDEGETMKDIGQIQNPCETKSS
FHRVPWGIGFSYPIGRIFKNEINNELVRLGILQYSGTSSDNFCRNDIGGLIKNELLLDTY
TIQNIENVVNSMTLIRGCTQTGYAINETVEEFVDRGRDGAGRVMVVITDGKSSDNVLYAS
DYARSLGISMIAVGVGSKSVYSELEEIADTTDFIFSVDFEGLFYVTSQLQMQIKVAGSLI
LEGSSTLQTNELTQCQMGISAFSAKEDHFYIGAVGSFDGIGSLIGGVTGNNSSYLHQGLI
HEQLGEETDDIRYSYYGYSVNGGDLFNNGEEWIITGVPRYNGHGAVVIFEPNNPLSMERN
VYKIIYQGNKKQKDIDSYFGYTICPVDLDNDGVMEILVGVPLYSNPVLADAFDEGAVLGY
KFVGEAAIQTDPSIFLSSKAPGSRFGSSISSVGDLDKDGFNDFVIGAPMENDGTGAIYVF
FGRADVNQDLIFQ
Nucleotide sequence
Length: 1,479
>Moocci.CG.ELv1_2.S621479.g26440.01.t
ATGTCAAAAATGCGCATACTAATATGTCTCCTTCAGGTTTGTGGCTCCCAATGGGAGTAC
GCGTGTCCCGCAGCAGTGATGAAAAAACGAATGGTTGGAAGATGCAAGATAATTAATGAC
GAAGGAGAAACGATGAAAGACATAGGTCAAATACAGAATCCATGCGAAACAAAGAGTTCT
TTTCACAGAGTGCCCTGGGGGATTGGATTTAGTTATCCTATTGGACGGATCTTCAAAAAT
GAAATCAACAATGAACTAGTACGTTTGGGAATATTACAATACAGTGGAACATCTTCTGAC
AATTTTTGCAGAAATGATATTGGAGGTCTGATAAAGAACGAACTGTTACTTGACACATAC
ACAATACAAAATATCGAAAATGTAGTAAACAGTATGACACTTATACGTGGTTGCACACAA
ACGGGTTATGCAATTAATGAAACTGTGGAAGAGTTCGTTGATAGAGGTCGCGACGGAGCA
GGAAGGGTTATGGTTGTTATCACCGACGGAAAATCTTCAGATAATGTATTATATGCTTCC
GATTATGCAAGATCATTAGGCATCAGCATGATAGCAGTTGGTGTTGGAAGTAAATCTGTG
TATAGCGAATTGGAGGAGATTGCTGACACAACAGACTTCATTTTTTCAGTTGATTTTGAG
GGACTCTTTTATGTGACATCCCAACTACAAATGCAGATTAAAGTTGCAGGGTCGCTTATC
CTAGAAGGATCGTCAACTTTACAAACGAATGAGCTTACCCAGTGTCAAATGGGTATTTCT
GCCTTTTCTGCAAAGGAAGACCATTTTTACATTGGAGCCGTAGGATCCTTTGATGGAATA
GGTTCACTTATAGGTGGAGTTACAGGAAACAATTCTTCATATTTACATCAAGGTTTAATT
CACGAACAATTAGGAGAAGAAACTGATGATATTAGATATTCATACTACGGTTATTCGGTC
AATGGTGGGGACTTATTCAACAATGGGGAAGAATGGATAATCACAGGGGTACCTAGGTAC
AATGGGCATGGTGCGGTGGTTATTTTTGAACCCAATAACCCGTTGAGTATGGAACGGAAC
GTTTATAAGATAATATACCAAGGCAACAAAAAACAAAAAGACATTGATTCATACTTTGGA
TACACAATTTGTCCAGTAGATTTGGACAATGATGGCGTTATGGAGATATTGGTAGGAGTT
CCACTTTACTCCAATCCTGTTTTAGCCGACGCATTTGATGAAGGAGCAGTTTTGGGATAC
AAATTTGTGGGAGAAGCTGCAATTCAGACAGACCCAAGCATTTTTCTTAGCAGTAAGGCA
CCAGGATCCAGATTTGGATCATCGATATCAAGTGTAGGTGATTTGGATAAAGATGGATTC
AACGATTTTGTAATCGGTGCACCGATGGAAAATGATGGAACTGGCGCAATTTATGTTTTC
TTCGGCAGAGCAGATGTTAATCAAGACCTCATTTTCCAA
| SMART |
VWF_A (IPR002035) - T[32-234] 5.1E-6 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[74-196] 5.6E-14 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[81-229] 7.19E-22 |
| Pfam |
VWF_A (IPR002035) - T[81-218] 1.8E-16 |
| ProSiteProfiles |
VWF_A (IPR002035) - T[83-229] 14.057 |
| Gene3D |
Integrin_alpha_N (IPR028994) - T[215-490] 4.8E-53 |
| ProSiteProfiles |
Int_alpha_beta-p (IPR013519) - T[302-358] 8.141 - T[364-427] 9.053 - T[429-489] 12.699 |
| SMART |
Int_alpha_beta-p (IPR013519) - T[312-362] 0.23 - T[375-437] 2.0E-4 - T[441-493] 9.2E-13 |
| PRINTS |
Integrin_alpha (IPR000413) - T[313-325] 5.1E-21 - T[372-392] 5.1E-21 - T[444-468] 5.1E-21 |
| Pfam |
FG-GAP (IPR013517) - T[379-407] 5.1E-5 - T[446-480] 4.3E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITAX_HUMAN | 29.067 % | 119 | 1.64E-28 |
| ITAD_HUMAN | 28.009 % | 121 | 5.02E-29 |
| ITA11_HUMAN | 28.429 % | 138 | 1.32E-34 |