- Transcript 'KH2012:KH.C12.370.v1...' >
- Transcript 'Moocci.CG.ELv1_2.S45...' >
- Transcript 'KH2012:KH.C1.73.v2.A...' >
- Transcript 'Moocci.CG.ELv1_2.S62...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S625464.g26808.01.t
Possible name(s)
ITGB1; ITGB2; ITGB7
Gene model
Location
S625464 [282 / 12,831]
Amino acid sequence
Length: 748
>Moocci.CG.ELv1_2.S625464.g26808.01.p
MDLSNSMRDDLEQLQQLGETLASEIQSITKDIHMGFGTFVDKVMMPFASTVPEQLKNPCI
KSQNNSQCDAPFGFKHQQKISARLDDFRSAVGKTNISGNIDTPEGGFDALMQIAVCKVCI
KLKRSTSKPDCHSLGYTSTLQGSLMSRKKQKYYGSIQNFGYTKFRAENEIGWRDDATHLV
VFTTDASFHMALDGRLAAIFDANDMQCHLTRNEKDIYVYDKSTELDYPSVGQLRSVFLKN
KIQPIFAVTKNVVSLYQALQNMIPNSHVGELAGDSSNVIDIIRRAYAALRAKLEMTTTAT
PAEVTLKTSVLCPDASEFVEGTTLKCDNISINKEVVYQFEITSNYDCKNEPSPGLIRFYS
SSIKEEVVIDMEYICDCECSLDISSNLNSPNCSYNGSLACGMCHCNQGHEGVRCQCSNDR
DYSLTEQCKQGGVGSNAEICEGNGGCECGNCECNPGYFGDFCECNEFDCPSDGGLCGGAE
KGTCHNCNGKAECRCKNDWTLDSAGRCICHAKLCKKNPTDTKECNGQGVCDCNSCKCHNN
SQIWSGTFCDQCVDPSCKNVSLKCDGSKMTQCAVCLNNAQMNDAKQQKCDEDCKDISYTI
KSEIPDCKKCKQTTGTVCEQVCKKIDVTKEFGACATPLPSNSMCDIKFEVMWDKDKQDYH
LVVKEFVKADDCREGINPLLYVLPIIAGIVIFGLLALILWKIYQTARDKKEWENFEKEMK
QSRWTKDINPVFVNPSARFENPSYGGDM
Nucleotide sequence
Length: 3,856
>Moocci.CG.ELv1_2.S625464.g26808.01.t
GTCAAACACAAAAGTTTAACGTGACCTTTAAAAAGGTAACTGATTACCCGGTGGACCTTT
ATTACGTCATGGATTTGTCGAACTCCATGAGGGACGATTTGGAACAACTGCAACAACTCG
GGGAAACTTTGGCCAGTGAAATCCAGAGTATTACTAAAGACATCCACATGGGGTTTGGAA
CTTTTGTCGACAAAGTTATGATGCCTTTTGCGAGCACAGTACCTGAACAGCTCAAAAACC
CGTGCATAAAAAGTCAGAACAACTCGCAATGTGACGCGCCTTTTGGGTTTAAACACCAGC
AGAAGATCTCGGCCAGACTGGATGACTTCAGATCGGCCGTTGGGAAGACCAACATCTCTG
GAAATATCGATACTCCCGAAGGGGGATTCGATGCCCTTATGCAGATCGCTGTCTGTAAGG
TATGTATAAAACTAAAACGGTCAACTTCAAAACCGGATTGTCATAGTTTAGGTTACACGA
GCACATTACAAGGAAGTCTGATGTCACGAAAAAAACAAAAGTATTACGGTAGTATACAAA
ACTTCGGCTATACGAAGTTCCGTGCCGAAAATGAAATAGGATGGAGAGACGATGCTACTC
ATCTTGTCGTTTTTACCACGGATGCTTCTTTTCACATGGCGCTAGATGGAAGACTTGCAG
CTATATTTGACGCCAACGACATGCAGTGCCATCTAACGAGGAATGAAAAGGACATTTACG
TTTACGACAAAAGCACGGAGCTTGATTACCCATCTGTTGGACAGCTACGATCCGTCTTCC
TTAAGAACAAAATCCAACCGATTTTTGCCGTCACCAAAAACGTAGTGTCATTATACCAGG
CCCTCCAAAACATGATCCCGAACTCCCACGTCGGAGAATTGGCCGGGGATTCTAGCAACG
TCATCGACATTATCAGGAGGGCTTACGCGGCCCTACGAGCCAAGCTAGAGATGACAACAA
CCGCCACACCAGCTGAAGTGACGTTAAAGACTTCCGTTCTTTGTCCGGATGCTTCTGAGT
TCGTCGAAGGGACGACACTAAAATGCGACAACATCAGTATAAACAAAGAGGTGGTCTATC
AGTTCGAGATAACTTCAAATTACGACTGCAAGAATGAACCTTCTCCTGGTCTCATTCGGT
TTTACTCTTCATCCATCAAAGAAGAAGTTGTCATCGATATGGAGTACATTTGTGATTGTG
AATGTTCACTAGACATCTCTTCAAATCTAAACAGTCCGAACTGCAGTTACAACGGGTCCT
TGGCATGTGGTATGTGCCATTGCAACCAGGGACACGAAGGCGTGCGTTGCCAGTGTAGTA
ACGACCGCGACTACTCGCTAACGGAGCAGTGCAAGCAAGGCGGTGTGGGTAGCAACGCGG
AGATTTGCGAGGGTAACGGCGGCTGTGAGTGCGGTAACTGTGAGTGCAACCCCGGGTATT
TTGGAGACTTTTGCGAGTGCAATGAGTTCGATTGCCCCAGCGATGGCGGATTGTGTGGGG
GAGCGGAAAAGGGAACGTGCCATAATTGCAACGGTAAAGCGGAGTGCCGGTGCAAGAATG
ATTGGACACTTGATAGCGCTGGAAGGTGCATATGTCACGCCAAACTATGCAAGAAAAACC
CCACAGACACTAAAGAGTGCAACGGTCAAGGGGTTTGTGACTGCAACTCTTGCAAATGCC
ACAACAACTCGCAAATATGGAGTGGAACCTTCTGCGATCAATGCGTGGATCCATCATGCA
AGAATGTCTCCCTGAAATGCGACGGTTCTAAAATGACCCAGTGCGCAGTTTGTCTAAACA
ACGCGCAGATGAACGACGCGAAGCAACAAAAATGTGATGAGGACTGCAAGGATATTTCCT
ACACTATTAAATCTGAAATTCCAGATTGTAAAAAATGCAAGCAAACAACCGGTACAGTTT
GCGAACAAGTCTGCAAGAAAATTGACGTGACAAAAGAGTTTGGGGCATGTGCTACTCCGC
TACCTTCTAACAGCATGTGTGACATCAAGTTCGAAGTTATGTGGGATAAAGATAAGCAAG
ACTACCATCTCGTGGTCAAAGAATTTGTGAAAGCTGATGATTGTCGTGAAGGGATAAATC
CTCTACTGTACGTTTTGCCTATCATAGCTGGGATCGTTATATTCGGGTTGTTGGCGCTGA
TCTTGTGGAAGATCTATCAGACCGCGCGGGATAAAAAAGAGTGGGAAAACTTCGAAAAGG
AAATGAAACAGTCCAGATGGACTAAGGACATTAACCCGGTGTTTGTGAACCCGTCGGCGC
GGTTTGAAAACCCATCGTACGGTGGAGACATGTAAAAACAAATTACCGGTGCATTCAGGA
GGCAGTGAGGCTCTTTTGGGCGTCTGGCTCCGATTTTTTATTCAACAAGATTTTGTTGTT
TTAATGGTATTCTATTAAAATGAACATAAATTTTATTATTTTAAATGGGAAAAAAGTAAA
AACATATTATGTCCAAAGAAATATTTAATAATTAAGATGTTAACCAAAGTTGCAAAACTC
GGCAACAACTAACAAATACACACGAATAGAATATATAAAAGGTCATCACTGCCAACTTCT
TCCGACTTCTGCAAAGTTTTTTTATTTTAAAATTATTCTTTGTACATAACAATTTTATTG
TTTGGTATTATTATGTATATTATTTTTATATTGCACATTTTACTTTTAAATGAATATCCA
TCTGCTTGTTATTTAATAGTTTATAGTTAATATACAATTTACGTATATTTATAACAATAA
TTCTAAATTCTCCCTAAAATTGTGATATTAAGCTAAAAAAGTTGAGTAATGTTTTAACAA
CACATAAATGATATTTATTTTTATTTCATTATTTATGAATAAAAGTTTTTTTTTCATCAA
TTTTAATTTGAACTAACCATGCAATTATAATAAAAAAGGAACTTGAACTTTTTATTCCTT
GTCAATTTATAAGCCTAAATTTTTTATTACGTTCCAAAAAGTTTTTTTTGTAATTTAGCC
TGCGTAAAAAATATTTGGCTTAACGTTGCTTACGTTATGTGAAATCACATTCATCAGACC
TACTTTTTTTTAATTCAAAATACTGCATTATTTTGCAAAAAATATGTTAATATTTTAGTA
AATTATTTAAATAAAAAAAATATTAACAAGTATAATGAATAAAAAAAGGATTTAAAAAAA
TAAAAATGACTTTAACACTTTCATTCTTACATTTAAAATAACATCATTTCGATTAATTAT
TTAAAATATAAAAAATATAAGTTCTAAATAAATATAAAAGCATTTTTATACTCGTACTTT
TTATTATAGCAATATATATATATATATATNNNNNNNATTTTTATTACTTGAACGCTCTAT
GTTAAATTATATGTTAATACCGCCTAAATATTATAGATTATACTGTGCCTTACTGCTTTT
GCAATCTTAATTTATGTTTAATAAAATTAAGCAGATTGTTCATTTGTTATTTACTTTTAG
CATTTGTAAAGCATACATTTGTTATAAACTGGAAGTTATCCCATACTAGGCACAACTGAA
GGTATGGAGATAAATTTAAAAGTAAGTGTTACAAAAAATGATAAAAATATGTTGGTTTTT
TAATAAGTGCAAAGAAGAGGAAAATTGTAAAATGTTCGCAATTCCCTAATATAACAAAAA
TAAAGTGCAAAACAAAAACTAAAAGGTGCAAGGTAAAAAGTGTAGGGTAAAATGTATAGA
TGTTAAAAGATTACTTAATACAACCAGTTGTATTAAGAATTACTTGATAATATACTGCAA
TGTCATGAAACTTGAATGAGGCTAGTAATAATATAAAAAATATTTCAGGCAACTGTTGTT
GATTCTTTAAAAGAAA
| PIRSF |
Integrin_bsu (IPR015812) - T[1-128] 8.8E-49 - T[164-748] 1.9E-127 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[1-117] 3.19E-61 - T[168-289] 3.19E-61 |
| SMART |
Integrin_bsu_VWA (IPR002369) - T[1-377] 3.3E-64 |
| PANTHER |
Integrin_bsu (IPR015812) - T[1-746] 4.6E-171 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[1-292] 7.9E-90 |
| PRINTS |
Integrin_bsu (IPR015812) - T[33-52] 1.1E-27 - T[68-87] 1.1E-27 - T[101-123] 1.1E-27 - T[487-500] 1.1E-27 - T[676-693] 1.1E-27 - T[693-711] 1.1E-27 |
| ProSitePatterns |
Integrin_bsu (IPR015812) - T[440-453] . - T[524-537] . |
| SMART |
Integrin_bsu_cyt_dom (IPR014836) - T[701-747] 4.1E-15 |
| Pfam |
Integrin_bsu_cyt_dom (IPR014836) - T[701-745] 9.6E-14 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB7_HUMAN | 31.523 % | 347 | 3.06E-108 |
| ITB2_HUMAN | 31.83 % | 341 | 5.18E-106 |
| ITB1_HUMAN | 33.729 % | 347 | 3.16E-108 |