- Transcript 'KH2012:KH.C4.686.v1....' >
- Transcript 'KH2012:KH.C3.248.v1....' >
- Transcript 'KH2012:KH.C4.686.v1....' >
- Transcript 'Moocci.CG.ELv1_2.S63...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S635806.g28027.01.t
Possible name(s)
ALYREF; POLDIP3
Gene model
Location
S635806 [7,097 / 14,253]
Amino acid sequence
Length: 378
>Moocci.CG.ELv1_2.S635806.g28027.01.p
MILTASNINYCFVKKEVNENKSISFEKLNTKNLLPLKKIGEIKTRIPSNIKFIKNPKQDK
PEIWGERNIQTGLRIAVQNDLASKKSPTAPQMKKFNVPGKRTPVQFQQMKITTVNKSAIR
KTNFPKKPVMTKLPPRKQTCHGSVSALLMIRLNQGPDSQNFVKILKSEQIMSTLSTLDKR
PVPVESKPEIPKKIIKSGPSGRPMISTKPSKFMEASQIKINKKQFVEDEIGISPIEGTRL
TVTNLHPIVSEDDILELFSVIGAVRRARLIKPGVAEVVYIKQDHAITAYKKYNNRDLDGQ
PMGIKINVPDPSSTHTQPQYSWMKEVKSSRHHGDEVAEIDAKVLQHALFKGGSTGTSIRP
KQVSFFHCRSILEKILMV
Nucleotide sequence
Length: 1,137
>Moocci.CG.ELv1_2.S635806.g28027.01.t
ATGATTTTAACTGCATCAAACATAAATTATTGTTTTGTGAAAAAAGAAGTTAATGAAAAT
AAATCTATTAGTTTTGAAAAATTAAATACAAAAAACTTGTTGCCATTAAAGAAAATCGGA
GAAATTAAAACAAGAATACCAAGCAATATCAAGTTTATAAAGAATCCCAAGCAAGACAAA
CCAGAAATATGGGGTGAGAGGAATATTCAAACAGGATTAAGAATCGCAGTCCAGAATGAT
TTAGCCAGTAAGAAGAGCCCAACTGCTCCTCAGATGAAGAAGTTTAATGTTCCTGGAAAA
CGGACACCAGTGCAGTTTCAGCAAATGAAGATAACGACTGTTAATAAAAGTGCTATAAGG
AAAACCAATTTTCCAAAGAAACCGGTGATGACCAAATTACCCCCAAGAAAACAAACATGT
CATGGTTCTGTTTCTGCCTTATTAATGATTAGACTAAACCAGGGACCTGATTCACAAAAC
TTTGTTAAAATTTTAAAGAGCGAGCAAATAATGAGCACACTTTCAACTTTAGACAAAAGG
CCAGTTCCTGTGGAATCGAAGCCGGAAATTCCTAAAAAGATAATTAAATCTGGACCAAGT
GGTAGACCTATGATTTCAACTAAGCCTTCAAAATTTATGGAAGCTTCTCAAATTAAAATC
AACAAAAAACAGTTTGTTGAAGATGAAATCGGTATTAGTCCAATTGAGGGTACTCGATTA
ACTGTCACCAATTTACATCCTATTGTATCAGAAGATGACATACTTGAATTATTCAGCGTA
ATTGGAGCAGTGCGTCGTGCCCGCTTGATCAAACCAGGAGTAGCTGAAGTTGTGTACATT
AAGCAGGACCATGCAATTACTGCTTACAAGAAGTACAATAATAGAGATTTGGATGGTCAA
CCTATGGGCATAAAAATAAACGTTCCAGATCCTTCTAGCACGCACACTCAACCACAGTAC
AGTTGGATGAAAGAAGTAAAAAGCTCTCGTCATCATGGTGACGAAGTGGCCGAAATTGAC
GCTAAAGTTTTACAGCATGCGCTGTTTAAAGGAGGAAGCACAGGGACATCAATTCGTCCG
AAACAGGTTTCATTTTTTCATTGTAGAAGCATCCTTGAAAAAATACTGATGGTGTAA
| PANTHER |
PDIP3 (IPR034785) - T[176-354] 5.9E-50 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[197-319] 1.3E-11 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[234-313] 3.36E-15 |
| CDD |
PDIP3_RRM (IPR034784) - T[238-306] 3.64165E-38 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[238-309] 11.332 |
| SMART |
RRM_dom (IPR000504) - T[239-305] 1.2E-9 |
| Pfam |
RRM_dom (IPR000504) - T[240-301] 1.1E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PDIP3_HUMAN | 44.516 % | 124 | 4.37E-32 |