- Transcript 'KH2012:KH.L141.65.v1...' >
- Transcript 'Moocci.CG.ELv1_2.S63...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S635963.g28063.01.t
Possible name(s)
DDX27; DDX47; DDX49
Gene model
Location
S635963 [2,888 / 6,407]
Amino acid sequence
Length: 457
>Moocci.CG.ELv1_2.S635963.g28063.01.p
MSSNDTESDVSELLKNDADVTFKSLGIVDVLCETCIELGWKTPSKIQQESIPLALEGKDI
IGLAETGSGKTGAFCIPILQALLETPQRLFALVLTPTRELAFQIDEQFKALGSAIGIKTC
VIVGGVDMMGQSIILAKKPHVIVATPGRLVDHLEKTKGFSLRTLKYLVMDEADRILNMDF
EAEVDKILKVIPRERNTFLFSATMTKKVKKLQRAALKNPVKCAVNTKYHTVEKLQQTYLF
IPAKDKDCYLVYIINELAGNSFIVFCSTCANTQRTTLLLRNLGLEAIPLHGQMSQPKRLG
ALNKFRSKARSILIATDVASRGLDIPHVDVVINFDIPTHSKDYIHRVGRTARAGRAGKSI
TFVTQYDVELYQRIEHLIGKKLPQYDCKEEEVKVLQERVMEAQRFARMEIKEEEQKKKER
KNRKRGGGDSDTEESSNITGGFRNKKSLSGKKPKRKK
Nucleotide sequence
Length: 2,304
>Moocci.CG.ELv1_2.S635963.g28063.01.t
ATTTAGTAATTTGTGGTGAAATAAAGCAAAAATGAGTAGTAATGATACGGAAAGTGATGT
TTCTGAATTGTTGAAAAATGATGCTGATGTTACTTTTAAATCACTGGGAATTGTAGATGT
TTTGTGTGAAACCTGCATTGAACTAGGATGGAAAACTCCTTCAAAAATTCAACAAGAATC
AATACCTTTGGCACTGGAAGGGAAAGACATTATTGGACTCGCAGAAACTGGATCAGGAAA
AACTGGTGCTTTTTGTATTCCGATATTACAGGCTTTGCTTGAAACTCCACAAAGACTTTT
TGCTCTTGTGCTTACTCCTACAAGAGAACTGGCTTTTCAAATTGATGAACAATTTAAAGC
ACTGGGGTCAGCAATAGGAATTAAAACTTGCGTTATTGTTGGTGGTGTAGATATGATGGG
ACAATCAATAATATTAGCCAAAAAACCACATGTGATTGTGGCCACTCCTGGTCGTCTTGT
TGATCATTTGGAAAAAACTAAAGGGTTTAGTTTGAGAACTTTAAAATATTTGGTTATGGA
TGAAGCTGACAGAATACTTAACATGGATTTTGAAGCTGAAGTCGATAAAATTTTAAAGGT
GATACCACGAGAAAGAAATACATTTTTATTCTCAGCCACGATGACAAAAAAGGTTAAGAA
ACTACAAAGAGCAGCATTAAAAAATCCAGTGAAATGTGCTGTTAATACAAAATATCATAC
TGTAGAAAAACTCCAACAAACTTACTTGTTTATTCCAGCAAAAGATAAAGATTGTTACCT
TGTTTACATTATAAATGAACTAGCAGGAAACTCCTTCATAGTATTCTGCAGTACTTGTGC
AAACACTCAGAGGACAACTTTATTACTACGGAATCTAGGGTTAGAAGCTATACCTCTCCA
TGGACAAATGTCCCAGCCAAAAAGATTGGGGGCATTGAATAAGTTCCGAAGCAAAGCACG
GTCAATTTTAATAGCCACTGATGTTGCAAGCCGGGGTTTGGACATCCCTCATGTGGATGT
AGTGATTAATTTTGATATTCCAACACATTCTAAAGATTACATCCACAGAGTTGGCAGAAC
AGCAAGAGCTGGAAGAGCCGGAAAATCAATAACATTTGTAACACAGTATGATGTGGAATT
GTATCAAAGAATTGAGCATCTTATAGGAAAAAAGTTACCACAGTATGATTGCAAAGAGGA
AGAGGTTAAAGTTCTACAAGAAAGAGTAATGGAAGCTCAAAGGTTTGCAAGAATGGAAAT
AAAAGAGGAGGAACAAAAAAAGAAAGAGCGTAAAAATCGTAAACGTGGTGGTGGTGATAG
TGATACAGAAGAATCTTCAAATATTACTGGCGGGTTTAGAAACAAAAAGTCCTTAAGTGG
TAAAAAACCTAAAAGAAAAAAGTGAAAAATATCAGAAAGCAATAATTCAAAATAAGGTTC
TGAAGTTGCAATTCATTAGGAGAAATGAAACGAGTTTTTTTGGTCAACTTAGATACAAAA
GCATATACCGGTACCTCACGTTTAATGAACTATTTTAATGGTTAATGCAAACATAAAAAT
TATTCTTTAATTGTATTGGACAAATAATAAATATGCAATAAATAAAGATTGCATCAAGTT
GTGTAATAATTTTGTGTATAAAAAATTATATAAAAGCATTATTTTTTAAAAATATTTGAA
TAAATTGATTTAAGCGTGTATGAATTATTTGCAATGTGTGAATAAATAACATCTAATATA
AGTTCATTCGATTTTAAAACTAAAACCCGATAATGCGGTGGAAAAAAAGCAAAGTTAAAT
GTTTGAAAAATTGGCCACAAAGTTAAATCAACAACAACAATAACTGGAACTTTGTCTTTA
AAATCTTGCTTAAATTGTTGAAAGTTATGTCCTTTTAAAAACGAAAGTCCTCCAATATAC
CAAGTGTACCATATTGGTCCAGATAAAACATCTAGACAAACTTTTATAGCAACTGATTTT
AACACTTTTCCTGGAAATCTATAGTCCAAAAATTTGTACCAATAATGCATTAACGGGCCA
GCTGTAGTGCAAACAATTGCCATGTTCGTGGATCTACTTTTGTCCCATTTAAATTTACTA
TTTAAACCTTGTTCAGTTTTTTGCGCAAGTATGTCGCCTGTAAATCCAAGAACTCCAGCT
GTAACTGTATTGGCAACCAAAGCATATTCTCCAACATATATATTTCTTAACTTACCAATA
TACTTTAAAATTTTATTCATAACATCTAGTCGTGGTGATAAATTAGTATATAGCGTATGC
TCTGTAATGTAATGAGACTAAAAA
| ProSiteProfiles |
RNA_helicase_DEAD_Q_motif (IPR014014) - T[20-48] 8.666 |
| SMART |
Helicase_ATP-bd (IPR014001) - T[39-237] 1.5E-55 |
| Pfam |
DEAD/DEAH_box_helicase_dom (IPR011545) - T[45-211] 3.5E-49 |
| ProSiteProfiles |
Helicase_ATP-bd (IPR014001) - T[51-222] 32.182 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[89-375] 2.11E-71 |
| ProSitePatterns |
RNA-helicase_DEAD-box_CS (IPR000629) - T[168-176] . |
| CDD |
Helicase_C (IPR001650) - T[233-362] 2.43158E-38 |
| ProSiteProfiles |
Helicase_C (IPR001650) - T[233-393] 23.002 |
| Pfam |
Helicase_C (IPR001650) - T[246-354] 2.8E-30 |
| SMART |
Helicase_C (IPR001650) - T[273-354] 1.4E-31 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DDX27_HUMAN | 39.835 % | 281 | 6.58E-87 |
| DDX47_HUMAN | 74.009 % | 698 | 0 |
| DDX49_HUMAN | 47.045 % | 382 | 2.02E-129 |