- Transcript 'Harore.CG.MTP2014.S2...' >
- Transcript 'KH2012:KH.C8.428.v2....' >
- Transcript 'KH2012:KH.C7.309.v4....' >
- Transcript 'Moocci.CG.ELv1_2.S63...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S636134.g28077.01.t
Possible name(s)
LRP4; LRP6
Gene model
Location
S636134 [2,701 / 11,244]
Amino acid sequence
Length: 1,077
>Moocci.CG.ELv1_2.S636134.g28077.01.p
MDAKVPIFIFLSVLISFYTSQGQDTSGDAECVKGPSIWYKGTRDKTASGIPCQRWDVETP
HKPNHIPKDGGHHNYCRNPDSDLRGTWCYTTDNATRWEYCNITKCKDESLVIWTNYDGAS
ESTHLLSVQADPEIVKQETDNSGTFNVTVVTGTNKSMSEFWALAADYGEKSLYFTDYRSE
YVGVRRMGYNMTLRHFEGMAHGIESMAFDWVTKNLYWSDSEFKWIMAAETSFRYYYPVYR
TDPDPPYGLAIHAVKRMLIFSTYKALGSKIITTDMAGKNPKTLFKFPQVFDDYLYVTDVH
ARYSMTADRFYSVWIITKATKQVFRYTLNGKPRGIAVYSENEEYSDDDAPSVDGDCDSQS
PCDHICLPRVNATRECACSLGYHLDQTGNKCIPKLIEDEYLLLADAGQGKVFQIPINISG
DVQDNSYSVVPLGQNWKTVTIAVDTKTKFLYWSDKKSPSVNKGILDGSRSSTLAKKHANS
IVVDPQTGNVFWSDNDNDNIYVSNTDGTMTKSIIRPATGSENTTSIRMIVQDLKNRFLYW
TDTNSAEDKGQVIRCRFDGTERTVVFDKLNWPHAITIDYGMNALFIAEAKQAMIYQVSLD
EIATINSTSIKEPVHKQHDISPYISRISPYIIDIKIHKDMLYVVDGKSSRLERFNITAGP
STMKPYGPAHFFRVTTVSVFSENTYNKYIKPIVNPCVNNFCRMMCVAKSDSDSVCMCPEG
QKAVGIVCVPDGTAELPNEAPSYGSTCPLEINVRTTECEKDATVIWTPPTWTDDKTPYSA
LRFSKPIYSPPHRFSEGTYELVYTATDTSNNVGHCRFKINVESTKCPPPPAAKPGMIKSK
LLCENYVGTEFNVTCQDPTLRVFSSGRYFDSYTVTCAHPGIWLTSMGADAKCVRAPTTTT
TTTTTSTASTPGTTTSSTPFVITTSSTPPTPKSTTSTSTQQPTTKTTIATTKTTTATTTA
TTPPPKTVPPTPSTNQPTVSTTSTTSGTTSKATKGTADKIEGAPNVEKSESSGLGGGAVA
AIVIVVIALILIVVIIAFVTLRRSHPLLMRMRFPIFWKPRDDTVDLHVSDDNHYTVM
Nucleotide sequence
Length: 4,413
>Moocci.CG.ELv1_2.S636134.g28077.01.t
ATTTTTGTTTCAGCATAGATAATCTAATTATCTTTACAAAATACGCTTAAGACAGCATTT
TTGCTTGAAATATTCTTCCGCATTTCTCTAAAGTTTGTTGAAAATAAAAGAGAATTTTAT
AGTTTTTTTTGTTTGTTTTAAACTAAAACCAGTATGGATGCGAAGGTGCCAATTTTTATA
TTTTTATCCGTTTTAATATCATTTTATACCTCGCAAGGCCAAGATACAAGCGGTGACGCG
GAGTGCGTTAAAGGACCAAGTATATGGTATAAAGGAACACGTGACAAAACAGCTAGCGGA
ATTCCATGTCAAAGATGGGACGTAGAGACACCTCATAAACCCAATCATATTCCCAAGGAT
GGAGGCCATCATAACTACTGCAGAAATCCTGATAGTGATTTGAGAGGAACATGGTGTTAT
ACTACAGATAACGCCACCAGATGGGAATATTGTAACATCACAAAATGCAAAGACGAATCT
CTTGTCATCTGGACCAACTATGATGGAGCAAGTGAAAGCACCCATTTGTTATCTGTACAG
GCTGACCCTGAAATCGTCAAACAAGAAACCGACAACTCGGGAACCTTTAATGTAACCGTA
GTGACAGGAACCAACAAAAGTATGAGCGAATTCTGGGCTCTTGCAGCTGATTATGGAGAA
AAGTCACTTTATTTTACTGATTATAGATCTGAATACGTTGGAGTAAGAAGAATGGGATAC
AATATGACTCTGCGTCACTTTGAAGGAATGGCTCATGGAATTGAAAGTATGGCTTTTGAT
TGGGTAACAAAGAATCTGTATTGGTCTGACTCTGAATTCAAATGGATCATGGCAGCTGAA
ACAAGCTTTAGATACTACTATCCAGTTTACAGAACAGACCCAGATCCTCCATATGGTCTT
GCAATCCATGCAGTCAAACGAATGCTCATTTTTTCAACTTACAAAGCTCTCGGATCTAAG
ATCATCACAACAGACATGGCTGGAAAAAATCCCAAAACGCTTTTTAAATTTCCACAAGTT
TTTGACGACTACTTGTATGTAACTGACGTTCACGCAAGATACAGTATGACTGCTGACCGA
TTCTACTCTGTATGGATCATCACCAAAGCTACAAAACAAGTATTTAGATACACTCTTAAT
GGAAAACCAAGAGGAATCGCAGTATACAGTGAAAACGAAGAATATTCTGACGATGATGCG
CCATCTGTTGATGGAGATTGTGACTCTCAAAGTCCTTGCGACCACATTTGCCTTCCTAGA
GTAAACGCCACAAGAGAATGTGCTTGCTCCCTTGGGTACCACCTTGACCAGACTGGAAAC
AAATGTATCCCAAAACTCATTGAAGATGAATATCTTTTGCTTGCGGATGCCGGCCAAGGC
AAAGTTTTCCAAATCCCAATCAACATTTCCGGTGACGTCCAAGATAACAGTTATAGTGTT
GTCCCGCTCGGTCAAAACTGGAAAACAGTAACGATTGCAGTAGACACAAAAACAAAATTC
CTTTATTGGTCTGACAAAAAGAGTCCATCAGTAAACAAAGGTATATTAGATGGATCCCGA
AGCTCTACTCTAGCGAAAAAGCATGCTAACAGCATCGTCGTTGACCCACAGACTGGCAAT
GTGTTTTGGTCGGACAATGATAATGACAATATATATGTTTCTAATACCGATGGAACCATG
ACTAAAAGTATTATCAGGCCTGCGACAGGTAGTGAAAACACAACAAGTATTAGAATGATC
GTACAAGATTTAAAGAATAGATTCTTATACTGGACTGACACGAACTCTGCAGAAGACAAA
GGTCAAGTTATAAGATGCCGTTTCGATGGAACAGAAAGAACAGTTGTATTTGATAAACTA
AATTGGCCACATGCTATTACAATCGACTATGGAATGAATGCTTTATTTATTGCTGAGGCA
AAACAAGCAATGATTTATCAAGTGAGTTTGGATGAAATTGCAACAATCAACTCAACATCT
ATTAAAGAACCAGTACATAAGCAACATGATATTTCTCCTTATATCTCAAGAATTAGTCCT
TATATCATAGATATTAAAATCCACAAAGACATGTTGTATGTTGTTGATGGTAAAAGTAGC
AGATTGGAACGCTTTAATATAACCGCAGGCCCATCTACCATGAAGCCATATGGTCCAGCA
CATTTCTTCCGCGTTACTACAGTCTCAGTTTTTAGTGAAAACACATACAATAAATATATC
AAACCCATCGTAAACCCTTGCGTAAATAACTTCTGTAGAATGATGTGCGTTGCTAAATCG
GACTCAGACTCAGTATGCATGTGTCCAGAGGGACAAAAAGCAGTGGGAATTGTCTGCGTT
CCAGATGGAACGGCAGAGCTTCCAAATGAAGCACCATCATATGGTAGCACTTGTCCACTT
GAGATTAACGTGCGCACTACTGAATGTGAAAAAGATGCTACAGTTATTTGGACACCGCCC
ACATGGACCGATGATAAAACTCCCTATAGCGCTTTGCGATTCAGCAAACCAATTTATTCA
CCGCCCCACCGATTCTCAGAAGGAACATACGAATTAGTCTACACTGCTACAGATACTTCA
AATAACGTTGGTCACTGCAGATTCAAAATTAATGTTGAAAGTACGAAATGTCCACCACCC
CCGGCCGCAAAACCTGGTATGATAAAATCTAAACTACTCTGCGAAAATTACGTTGGAACA
GAATTCAACGTTACGTGTCAAGACCCAACTTTGCGTGTATTTTCTTCTGGGCGATATTTC
GATTCCTACACAGTAACATGCGCACACCCAGGAATATGGCTTACCAGTATGGGTGCTGAC
GCAAAATGTGTACGAGCACCTACAACGACAACCACAACTACTACAACATCTACAGCTTCT
ACGCCAGGTACCACGACTTCCTCAACACCATTTGTCATAACAACCTCTTCTACACCACCT
ACCCCAAAATCCACAACTTCTACAAGCACACAACAACCTACAACTAAAACCACTATTGCT
ACAACTAAAACCACTACTGCTACAACTACCGCCACAACTCCACCCCCCAAAACAGTCCCC
CCTACTCCATCCACCAACCAGCCTACTGTCTCAACAACTAGTACGACAAGTGGGACAACT
TCAAAGGCGACAAAAGGCACTGCCGATAAAATTGAAGGTGCACCGAATGTGGAAAAATCT
GAATCTTCTGGACTGGGCGGAGGAGCAGTTGCAGCTATCGTCATCGTCGTGATAGCGTTA
ATTTTAATTGTTGTTATCATCGCATTTGTAACATTAAGACGAAGTCACCCACTCTTAATG
AGGATGCGGTTCCCAATATTTTGGAAACCGAGAGACGATACAGTGGACTTGCACGTATCC
GATGACAATCACTACACTGTTATGTGATCGGAACTATTGTTTTCTTCCCGAATTGTGTAA
TAATTGCTATATACAGACGATATTTGGTCCAGAAAGTTGAAACGCACAGACAAAGCTTGT
TTCGCAAAGAACCTTTTATATTTTATTTAATATCTTGTCATAGTTTCCTTGTTTCTTTAC
ATTTCAATCCATTCTTGATCTCTGTTTTATATCTTAAACTCACGTGTCAAAAATGGAGAT
TACCATTATATCACCCCAAGTATTGCGCGGCCTGATAATGCACCATTCCATGCAATTGTT
ATAAAATTTTCTAACAATTGCAATCAGATTTTATTTAAATATTCATTCATGTAATTCGTG
TTTATTCCCTCTTAGACTGCGGAATCGCCCCGCTTGGGAAGTAACCAAATTCTCTTTCCC
CGTGTTCTGGAAACGAAAGACTGACGAATCAGTAACCATGGGAGCATCGTCAAATCAAAA
TTACGAGATAATGACATAGTTGTTTCATAAAAAATCACAAATTGCCAGCTATAAATGTGC
ATATGTTTTGGCCAACTTCATCTCATATTGCTATCATACTCGTTCTATATATTGTTTTTG
AAATTTGCCATCAGGATTTACCAAAAGATATAATGGCAATCTCCATACGAAACACAAACA
TTTCTATTTTTGCGGTATTGTTATATGTATATTGTGCCTTATAAATAACATAAAATATAT
AACATAAAGAAATTTCATAATTTTAATATAAAACAGGGTATATAGTATATAATTTTAAAT
CTTATTAATAATGGTATCACGGCAAATATATAGTTTTAGTAGAATTTTAAATTATGCCAT
TTACGGCCTTTGTAATTATTTGAAAGTGTTAATACCCTTATTATATTTTATTGTAAAAGT
ATTATGCTTTATTATATATGATTTTTATATTATATTATATATTATTACAATCTGTTTTGC
TTTTTCTGTGCGTTGGTTTTTCCAAGCGAATATTTTGTTGTAATAAAGTTTTACAATGCT
CTATGAAATTAATAAATATTCAAAAATTGAGTA
| Gene3D |
Kringle_sf (IPR038178) - T[14-114] 9.1E-28 |
| SUPERFAMILY |
Kringle-like (IPR013806) - T[24-109] 1.21E-28 |
| SMART |
Kringle (IPR000001) - T[29-107] 6.0E-25 |
| ProSiteProfiles |
Kringle (IPR000001) - T[30-105] 22.241 |
| Pfam |
Kringle (IPR000001) - T[31-105] 4.9E-19 |
| ProSitePatterns |
Kringle_CS (IPR018056) - T[75-88] . |
| Gene3D |
6-blade_b-propeller_TolB-like (IPR011042) - T[115-287] 4.2E-20 - T[288-393] 8.2E-10 - T[396-719] 7.3E-45 |
| ProSiteProfiles |
LDLR_classB_rpt (IPR000033) - T[170-212] 4.657 - T[213-255] 8.555 - T[448-473] 7.534 - T[488-530] 9.158 - T[536-581] 11.2 |
| SMART |
LDLR_classB_rpt (IPR000033) - T[193-233] 2.1 - T[236-280] 11.0 - T[429-470] 2.6 - T[471-510] 0.0038 - T[511-562] 2.1 - T[563-604] 36.0 |
| SMART |
EGF-like_dom (IPR000742) - T[355-392] 0.034 - T[695-729] 59.0 |
| ProSiteProfiles |
HYR_dom (IPR003410) - T[737-823] 18.006 |
| Pfam |
HYR_dom (IPR003410) - T[746-821] 1.0E-6 |
| ProSiteProfiles |
Sushi_SCR_CCP_dom (IPR000436) - T[824-894] 7.899 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LRP1_HUMAN | 25.743 % | 99.8 | 6.28E-21 |
| LRP4_HUMAN | 22.987 % | 120 | 2.12E-27 |
| LRP6_HUMAN | 23.356 % | 119 | 4.7E-27 |