Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S638200.g28414.01.t

Possible name(s)

VIPAS39

Gene model

Moocci.CG.ELv1_2.S638200.g28414

Location

S638200 [594 / 2,160]

Sequences

Amino acid sequence

Length: 521

>Moocci.CG.ELv1_2.S638200.g28414.01.p
MSTKKNIPSSTGTSRYEDGDDFWNSKSTFKPFNFDDDDGDDSIETIEWNGATAAPVRFEK
SRSMNMQQQSVKQINSGPTSARPTSARVASARQHPRKTFSQSTAIISNSSVKRQDGTLSS
VNKTSTSFNEGKSISDMVSVGKPISTTDISKLEAEISSLRRQLIQAKKDRSVAPSCSETL
KRFMTGDTSILELYKSREDKSALLNSAIQRRDGNAILAITLFMRNTLKREIFSKELMDQP
VAVDHYCAYLRATLETEELHEILTVLGRTEEAAMLKYRQSLKNSRSPELRINSLQDCIKY
YFDSDPRLSHETQHIQEQCMLLRKQIVVDDNDRQTQDSATHSIFKTHPRRDSLLHKSLVT
TLYYMCYYHWGEAEGLLSSPLSLRMEHKINEKQFIYIAIAALCRMRKWKDLENVLTQEKK
LWRSARLHAVIGFDKVVDVLSKNLAPNDVIGKYCAEIDTSDQRLQMAIKHNCHKVAVDTM
VYQKDRHALLSYANNKIPDNQLHMKQFAIEQSKRHDIKWKN

Nucleotide sequence

Length: 1,566

>Moocci.CG.ELv1_2.S638200.g28414.01.t
ATGTCAACGAAAAAGAATATACCGTCTAGTACCGGTACTTCCCGTTATGAAGACGGCGAT
GATTTTTGGAACAGTAAATCAACATTTAAACCGTTTAATTTTGATGATGATGACGGAGAT
GATAGTATTGAAACTATTGAATGGAATGGTGCAACTGCTGCTCCAGTCAGATTTGAAAAG
TCCAGAAGCATGAATATGCAACAACAGTCAGTAAAACAAATCAATTCTGGCCCCACTTCT
GCTAGACCAACTTCTGCTAGAGTTGCGTCTGCTAGGCAGCACCCAAGAAAGACGTTCTCT
CAATCTACTGCCATTATTTCCAATAGTAGTGTGAAAAGACAAGATGGAACTTTATCTAGT
GTTAATAAAACATCTACTTCATTTAACGAAGGAAAATCTATTTCAGACATGGTCAGTGTT
GGAAAACCAATATCAACAACAGACATTTCAAAACTAGAAGCAGAAATTTCATCTCTGAGG
CGACAGCTTATTCAAGCCAAAAAAGATCGCTCTGTTGCACCATCTTGTTCTGAAACTTTA
AAGCGATTCATGACAGGAGATACAAGTATATTGGAACTCTATAAATCTCGAGAGGACAAG
AGTGCATTGCTAAACTCTGCTATTCAAAGACGGGATGGAAATGCAATTTTAGCAATAACT
CTGTTTATGAGAAATACATTAAAACGGGAAATATTTAGTAAGGAATTGATGGACCAACCA
GTGGCTGTAGACCATTATTGTGCTTATTTAAGGGCTACATTGGAGACTGAAGAGTTGCAT
GAAATTTTAACAGTTCTCGGTCGAACAGAGGAAGCCGCAATGTTAAAATATAGACAAAGT
TTAAAAAATTCAAGATCACCAGAATTAAGAATAAACAGTCTTCAAGATTGTATTAAATAT
TACTTTGATTCAGATCCGCGACTTAGTCATGAAACTCAACACATTCAAGAGCAATGTATG
TTACTACGAAAACAAATAGTTGTTGATGACAATGATAGACAAACTCAAGACTCAGCTACT
CACTCAATATTTAAAACACATCCTAGACGCGATTCATTATTGCACAAATCATTAGTAACA
ACATTGTACTACATGTGTTATTATCATTGGGGAGAAGCTGAAGGATTGTTAAGCAGTCCT
CTGTCGTTACGAATGGAGCATAAAATTAACGAAAAACAATTTATTTATATTGCAATTGCT
GCACTTTGTAGAATGCGAAAGTGGAAAGACCTTGAAAATGTATTAACTCAAGAAAAGAAA
TTATGGAGAAGTGCTAGATTACATGCTGTTATTGGTTTTGATAAAGTTGTCGATGTCCTT
AGTAAAAATCTTGCACCAAATGATGTCATTGGTAAATACTGCGCTGAAATTGACACATCA
GATCAACGTTTGCAAATGGCTATAAAGCATAATTGTCATAAGGTGGCAGTGGATACAATG
GTATATCAAAAAGATAGACATGCTTTATTGTCCTATGCTAATAACAAGATCCCAGACAAC
CAGTTACACATGAAACAATTCGCAATTGAGCAGTCAAAAAGACATGACATTAAATGGAAA
AATTAG

InterProScan

Gene3D	Vps16_C_sf (IPR038132) - T[188-473] 7.9E-19
Pfam	Vps16_C (IPR006925) - T[189-327] 2.7E-7 - T[383-497] 4.8E-5

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SPE39_HUMAN	31.384 %	216	5.62E-64