- Clone 'cign042n22' >
- Transcript 'KH2012:KH.C2.959.v1....' >
- Transcript 'Harore.CG.MTP2014.S4...' >
- Transcript 'Phfumi.CG.MTP2014.S6...' >
- Transcript 'Moocci.CG.ELv1_2.S63...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S639250.g28527.01.t
Possible name(s)
SEMA6A; SEMA6B; SEMA6C
Gene model
Location
S639250 [400 / 4,521]
Amino acid sequence
Length: 921
>Moocci.CG.ELv1_2.S639250.g28527.01.p
MEIDGEKVVFATMTTPENSIPGSAICAFSLTSINQALFGDFFKRSYQDGNTLCFSEHGQQ
APHMPNHPAVCPGVNQDTRDLDINNLEFRRKNVLVKSVVQPVNNIPLFLQTQSRHSINVI
AVDDEAARASKYKNTTFIYLGTSNGHLLKIITTLNSSAKETVLSEDMKVYMPEKCGLSND
TESNDANRVLKIVPIPGQNSILVAFKDCVISVPKHECGNYTCKRNCVQSGNPYCGWHKGE
CVATIGLDKNLFQQDLFAEKKIEDFCGDNNKPTYELVAECRGNSIIPVVVPVAVCAFFLV
VIMIFLVIYKMKKNPRIRRDKNLNGNNNILNNSYKRGASFTVEPASANMLNRDYSNRRIY
TGPKNDLKRPSNASSISRNQSIRSQAPQVPPPLPPSYENSPKSQNIMKEASYESLKSTAE
IKTPESPNNRGRTGSHSSHTSTGSSSRRFHGVNIVHNVKTSPPPRNGAKEKSSNINNNNK
TIPRKIIGVATAMSRNESPVRRRCRSTPDDDARDLLLTPGGSKCVRNNSLSSSSTQNNKD
NGIIPTQTSSILNHGGPPMVTSYNPVQNDKNRTFKRLSSTLPDDPDYENVPAFKESPNEN
KAPKPPPVSAKPDRKLSSFSNAHFNTSWFPATVADDHNIKNINENSNEGSSGFGSASTSS
RSSLDKTSSENHDHVRKFSEPVVNSSRLIKGDAILNKNSSLKTYTDMRRTMAPPNHLRID
QSQHCQPAVENVNDTAFDSCYINQSNDNAIPIQYDEDSAFFDGKHDSSEDDIMKDLEEIM
QRGGCRKQSTKKRKKSKKSAKQSYSVDSSSPSDSEMCPYYGAVESIHSNSGLPVVISDEE
HIYEIPKFDLATSEKPKQSTDDFNIGKSNQNSYMSEVNGATSYAFHTMRPKGRRRQKLPR
LRNAEKSEEKPLAVPTPTIPL
Nucleotide sequence
Length: 3,174
>Moocci.CG.ELv1_2.S639250.g28527.01.t
AGCTGGTGTATTCAAGGGTAGCGCAAGTGTGCAAGAACGACAGAGGTGGAAATAAAGACT
TTCGTAGTCAAAAGTGGACGTCGTTTTTTAAAGCTCGGTTGAATTGCTCGATACCAGGTG
CTAGACCATTTTACTTCAACGAGATCCAACACATAAGTAATGCGATGGAAATTGATGGAG
AGAAGGTTGTTTTTGCTACCATGACAACACCAGAAAACAGTATTCCGGGTTCAGCAATAT
GTGCATTTTCTTTGACCTCTATCAACCAGGCATTGTTTGGAGATTTTTTCAAGCGTTCGT
ACCAAGATGGTAATACCCTGTGCTTCAGTGAGCACGGACAACAGGCTCCGCACATGCCAA
ATCATCCCGCTGTGTGTCCAGGAGTAAATCAAGATACAAGGGATCTTGACATAAACAATT
TGGAGTTCAGAAGGAAGAATGTTTTAGTAAAGTCAGTGGTGCAACCGGTCAACAATATTC
CACTGTTTCTCCAAACTCAATCTCGCCATAGTATTAATGTGATAGCAGTAGATGATGAAG
CAGCCCGAGCTTCAAAATACAAAAACACAACTTTTATTTATTTAGGTACAAGCAATGGTC
ATTTACTAAAAATTATAACAACACTAAACAGTTCTGCCAAAGAAACAGTGTTATCAGAAG
ATATGAAAGTGTATATGCCGGAAAAATGTGGACTGAGTAACGATACCGAGTCAAATGATG
CGAATCGCGTACTTAAAATCGTCCCGATTCCGGGCCAAAACTCGATTCTTGTCGCGTTCA
AAGATTGTGTGATATCAGTTCCCAAGCATGAATGCGGAAATTACACGTGTAAAAGAAATT
GTGTGCAGTCAGGAAATCCATATTGCGGATGGCACAAAGGTGAATGTGTTGCTACAATCG
GACTTGATAAGAATTTATTCCAACAAGATTTGTTTGCGGAAAAGAAAATAGAAGATTTTT
GTGGAGATAATAATAAACCAACCTATGAGTTAGTTGCAGAATGCCGTGGAAACTCTATTA
TACCAGTTGTTGTACCGGTTGCTGTTTGTGCCTTCTTTCTTGTGGTTATCATGATATTTC
TAGTCATTTACAAGATGAAAAAGAATCCAAGGATAAGAAGGGATAAGAATTTAAATGGGA
ACAACAATATATTAAATAACTCGTACAAAAGAGGTGCAAGTTTCACTGTTGAGCCCGCGA
GTGCAAATATGCTGAATAGGGACTACAGTAATCGAAGAATTTACACAGGACCAAAGAATG
ACCTGAAACGTCCTTCAAATGCCTCGTCTATTTCTCGAAATCAATCTATTAGATCTCAAG
CCCCCCAGGTTCCTCCTCCTCTGCCACCCTCATACGAAAACTCGCCCAAATCACAAAATA
TAATGAAAGAAGCATCCTATGAGTCATTAAAGTCGACAGCCGAAATAAAGACGCCTGAAT
CACCAAATAACAGAGGCAGAACCGGAAGTCATTCCAGCCATACTAGTACTGGCAGCAGTA
GCCGCCGTTTCCATGGCGTTAATATTGTGCATAATGTAAAGACATCGCCACCACCGCGAA
ATGGAGCTAAAGAGAAGTCATCAAACATCAACAACAACAATAAAACTATTCCACGAAAAA
TAATTGGTGTAGCCACTGCTATGTCAAGGAACGAATCACCTGTTAGAAGAAGATGCAGAT
CAACACCGGATGATGACGCTAGAGATCTTCTACTTACACCAGGAGGAAGCAAATGTGTAA
GAAACAACAGCCTTAGCAGTTCTTCGACTCAAAATAACAAGGATAATGGAATTATTCCTA
CGCAGACATCTTCCATATTAAATCACGGTGGACCTCCAATGGTTACAAGTTACAACCCTG
TTCAAAACGACAAAAACCGAACTTTTAAACGCCTGAGTAGCACTCTTCCAGACGACCCGG
ATTACGAAAACGTTCCAGCTTTTAAAGAATCACCTAATGAAAACAAGGCACCAAAACCTC
CACCTGTCTCTGCAAAACCAGATCGCAAACTGTCCTCCTTTAGCAACGCCCACTTCAATA
CATCCTGGTTTCCCGCAACAGTTGCAGATGACCACAACATCAAGAATATCAATGAAAACA
GTAATGAAGGTTCATCTGGATTTGGAAGCGCTTCTACATCTTCAAGATCAAGTTTGGATA
AAACCAGTAGCGAAAATCATGATCATGTAAGAAAGTTTTCTGAACCAGTTGTAAATAGCT
CTCGTTTAATAAAAGGTGATGCTATATTGAATAAAAATTCTTCATTAAAAACCTATACAG
ATATGCGACGCACAATGGCGCCACCAAATCATTTAAGAATCGATCAATCTCAACACTGCC
AACCAGCGGTTGAAAATGTAAATGACACTGCCTTTGACTCGTGTTACATCAATCAGTCCA
ACGACAACGCTATTCCAATTCAATATGATGAAGATTCTGCATTTTTTGACGGCAAACACG
ATTCGTCGGAGGATGATATAATGAAAGACTTAGAAGAAATAATGCAAAGAGGAGGTTGCA
GGAAACAGTCCACTAAAAAACGTAAAAAATCTAAAAAATCAGCAAAGCAATCGTATTCCG
TCGATAGTTCGTCGCCGTCAGATAGCGAGATGTGTCCGTATTACGGAGCTGTGGAAAGTA
TTCATTCAAACAGTGGTTTACCCGTGGTGATAAGCGACGAAGAACATATTTACGAGATTC
CAAAATTTGATTTGGCAACATCAGAAAAACCGAAGCAAAGTACAGATGATTTTAATATCG
GAAAATCAAATCAAAATTCGTACATGTCAGAGGTTAACGGTGCAACCAGCTACGCTTTTC
ACACCATGCGACCGAAGGGCCGGAGGCGGCAAAAACTTCCTCGGTTACGGAACGCGGAGA
AATCGGAAGAAAAACCGTTAGCCGTCCCAACGCCGACAATACCGTTATAAGATTTTGTTC
CTGGCAATGCGGTATATTTGTTCAACAATATAGACTTCTTCAATATTTTTTAACATATCC
ACGCAATATATAACTCATTTTATCGTTGAAATAATTTTAGTTCTACCATAGTACGTTGTT
ATTTATTTGATTCGTGTCGTTAATTGTATAACGACAATTTATCGTAGCATGTTGTATTAT
AGCTGTTTATTTTTTGTAATATATTTAATTTTATAAATAAATGAAACATTGTAA
| ProSiteProfiles |
Semap_dom (IPR001627) - T[1-214] 27.189 |
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[2-218] 8.1E-34 |
| Pfam |
Semap_dom (IPR001627) - T[5-170] 1.2E-20 |
| SUPERFAMILY |
Semap_dom_sf (IPR036352) - T[5-220] 9.55E-27 |
| PANTHER |
Semaphorin (IPR027231) - T[6-481] 3.1E-44 - T[791-791] 3.1E-44 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SEM6A_HUMAN | 31.655 % | 132 | 2.43E-31 |
| SEM6B_HUMAN | 31.321 % | 134 | 5.84E-32 |
| SEM6C_HUMAN | 32.645 % | 132 | 2.41E-31 |