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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.S610.5.v1....'
  2. Transcript 'Moocci.CG.ELv1_2.S64...'

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S649805.g30121.01.t

Possible name(s)

SMYD1; SMYD2; SMYD3

Location

S649805 [1,624 / 9,274]

Sequences

Amino acid sequence

Length: 456

>Moocci.CG.ELv1_2.S649805.g30121.01.p
MASCSCFQMFISKEKGRGLRANRSIQPGTLLMKHNPFVYVLSKAQKGIRCDHCFKKQEVL
LRCSQCKYMRYCNKSCQVNQFTFPYSLEFCILVMLELDKGSWSQHKKECEALKRVAPKTP
PDFVILLSRVLWKLENSMDNDRPEDLVSIMDLESNYSRLTDDQKENLGQFVIILHSYWGQ
GTLPLQTPDIKAVLELCAKVVSFIVKQLRQAKNVLYVGLDPKPFCSIGTAVKKSYINQLH
QQLKYSGSVIYLKNNCFAIGDEEMRMDIGCGIYLKLYKKSTNKILEHDFNKICSLLNHDC
APNCVAVFDNLELSIRLTISYTDQLAPSFDRQEDLRSIYAFTCKCKRCREIITDRKMTLN
CNPKNSEKMYLENGSQQLAIVKAIVLELDKVSKTGDYKLVHEITEDYIKRQVLPFENVYM
TKILDYAMDACINTQNYKKAILYGRKSISTYQFIGN

Nucleotide sequence

Length: 1,371

>Moocci.CG.ELv1_2.S649805.g30121.01.t
ATGGCGTCATGCAGTTGTTTCCAAATGTTTATAAGCAAAGAAAAGGGGAGAGGTCTTCGA
GCAAATAGAAGTATACAGCCTGGGACTCTTTTAATGAAGCACAACCCGTTTGTTTATGTC
TTAAGCAAAGCTCAAAAGGGAATCAGATGTGATCACTGTTTTAAAAAGCAAGAAGTGTTG
CTCAGATGTTCGCAATGCAAATACATGAGGTACTGCAATAAATCTTGCCAGGTTAACCAG
TTTACTTTTCCATATAGTCTTGAATTCTGTATCCTGGTTATGCTAGAATTGGATAAAGGC
TCATGGTCACAACATAAAAAAGAATGCGAAGCGTTAAAGCGAGTTGCGCCAAAAACCCCT
CCAGATTTTGTTATACTCCTGAGTAGAGTTTTATGGAAATTGGAAAATTCTATGGATAAC
GATAGACCAGAAGATCTTGTTTCTATTATGGACCTTGAATCAAATTACAGCCGATTAACA
GATGATCAAAAAGAAAATTTGGGACAATTTGTAATTATTCTTCATTCATATTGGGGCCAG
GGAACATTACCGTTGCAAACCCCTGATATTAAAGCTGTTTTAGAACTGTGTGCGAAGGTA
GTATCTTTTATTGTAAAGCAACTAAGACAAGCTAAAAATGTGCTATACGTCGGACTTGAT
CCTAAACCTTTCTGTAGTATTGGAACAGCAGTGAAAAAATCATACATCAATCAACTGCAC
CAACAGTTAAAATATAGTGGTTCTGTGATCTATTTAAAGAATAATTGTTTTGCGATTGGT
GACGAAGAAATGCGAATGGATATAGGTTGTGGAATATATTTAAAGCTCTACAAGAAAAGC
ACTAACAAAATATTAGAACATGATTTTAATAAAATTTGCAGTCTTTTGAACCACGACTGT
GCACCTAATTGTGTGGCCGTATTCGACAATTTGGAATTGAGTATCCGACTTACAATATCA
TACACAGACCAACTTGCACCTAGTTTTGACCGGCAAGAAGATTTGAGGAGTATATATGCG
TTCACATGCAAATGTAAAAGGTGCAGGGAGATCATAACAGATCGCAAAATGACATTAAAC
TGCAACCCCAAGAACAGTGAGAAGATGTATCTAGAAAACGGTTCACAGCAACTTGCAATT
GTAAAAGCCATTGTGCTCGAACTTGATAAAGTATCTAAAACAGGCGATTACAAACTCGTT
CATGAGATAACCGAAGATTATATAAAACGACAAGTTCTACCTTTTGAAAATGTTTACATG
ACTAAAATATTGGATTATGCAATGGACGCTTGCATAAACACACAAAACTATAAGAAAGCA
ATTTTATATGGAAGAAAATCTATATCTACATACCAATTTATAGGAAATTAG

InterProScan

ProSiteProfiles
SET_dom (IPR001214) - T[5-340] 9.06
Pfam
SET_dom (IPR001214) - T[16-310] 1.6E-5
Pfam
Znf_MYND (IPR002893) - T[50-80] 1.8E-5
ProSiteProfiles
Znf_MYND (IPR002893) - T[50-109] 9.572
Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[324-456] 5.9E-19

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SMYD3_HUMAN 28.603 % 178 4.17E-51
SMYD1_HUMAN 21.569 % 108 1.43E-25
SMYD2_HUMAN 28.718 % 85.9 4.27E-18