Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S651622.g30438.01.t

Possible name(s)

CDK20; CDK7

Gene model

Moocci.CG.ELv1_2.S651622.g30438

Location

S651622 [48,077 / 50,283]

Sequences

Amino acid sequence

Length: 296

>Moocci.CG.ELv1_2.S651622.g30438.01.p
MTDKTVRYEKVEFLGEGQFATVYKAKDTQNDNRIVAVKKIKLGNREEAKDGINRTALREI
KLLEELHHENIIDAFGHKSNISLVFDFMETDLEVIIKDTSLVLTQSHIKAYMIMTLKGLE
YLHANWILHRDLKPNNLLVDIHGVLKIGDFGLAKTFGSPSREYTHQVVTRWYRCPELLFG
ARLYGVGVDMWAVGCILAELLLRVPFMPGDSDLDQLSKIFETLGTPTEVEWPGMTSLPDY
ISFKEFPGIPLKECFSAASDELLQVISGLLRYCPNTRTSASQNPEYLGDSDYILVN

Nucleotide sequence

Length: 891

>Moocci.CG.ELv1_2.S651622.g30438.01.t
ATGACGGACAAAACTGTTCGTTATGAAAAGGTTGAGTTTTTAGGAGAGGGTCAATTTGCT
ACTGTATACAAAGCCAAAGACACACAAAACGACAATCGGATAGTTGCTGTTAAAAAGATT
AAACTTGGAAATCGAGAAGAAGCTAAAGATGGAATTAACAGAACTGCTTTACGTGAAATA
AAACTCTTAGAAGAGTTACATCATGAGAATATTATAGATGCATTTGGTCATAAGTCAAAT
ATAAGTCTTGTTTTCGACTTTATGGAGACTGATTTGGAAGTTATTATAAAGGACACAAGT
CTTGTACTTACACAAAGTCATATAAAAGCATACATGATCATGACGCTAAAAGGGCTCGAA
TATTTACATGCTAATTGGATTTTGCATAGAGATTTAAAACCCAACAATTTACTAGTGGAT
ATTCATGGTGTGCTAAAGATTGGGGATTTTGGACTTGCAAAAACATTTGGCAGTCCGAGT
AGAGAATATACACACCAAGTTGTTACAAGGTGGTACAGATGCCCGGAGTTGTTATTTGGT
GCTCGACTGTATGGTGTTGGTGTGGACATGTGGGCCGTTGGTTGTATTCTAGCAGAACTG
TTATTAAGAGTCCCTTTTATGCCTGGAGATTCTGATCTAGATCAATTGAGCAAGATTTTT
GAAACTTTAGGTACACCGACTGAAGTTGAATGGCCAGGCATGACATCTCTCCCAGATTAT
ATAAGTTTTAAGGAGTTTCCCGGTATACCACTGAAAGAATGTTTTTCTGCTGCATCTGAT
GAACTGTTGCAAGTTATCTCAGGACTGCTGCGATATTGTCCAAATACAAGAACAAGTGCT
TCACAGAATCCAGAATATCTGGGAGATTCGGATTATATTTTAGTAAATTAA

InterProScan

PANTHER	CDK7 (IPR037770) - T[6-282] 3.7E-134
SUPERFAMILY	Kinase-like_dom_sf (IPR011009) - T[7-282] 1.35E-82
Pfam	Prot_kinase_dom (IPR000719) - T[8-282] 4.3E-65
SMART	Prot_kinase_dom (IPR000719) - T[8-287] 2.8E-73
ProSiteProfiles	Prot_kinase_dom (IPR000719) - T[8-293] 40.683
ProSitePatterns	Protein_kinase_ATP_BS (IPR017441) - T[14-39] .
ProSitePatterns	Ser/Thr_kinase_AS (IPR008271) - T[127-139] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CDK2_HUMAN	44.245 %	245	1.85E-80
CDK7_HUMAN	78.014 %	458	7.78E-164
CDK20_HUMAN	46.57 %	239	1.73E-77