Aniseed - Transcript Card

Transcript Model

Transcript Id

Moocci.CG.ELv1_2.S656146.g31048.01.t

Possible name(s)

AP3B1; AP3B2; COPB1

Gene model

Moocci.CG.ELv1_2.S656146.g31048

Location

S656146 [23,146 / 25,320]

Sequences

Amino acid sequence

Length: 303

>Moocci.CG.ELv1_2.S656146.g31048.01.p
MFNEKALWYLLIMTSAESICYTLINVPSITDSEPTNETQLKNDIEHGDLRTKTESLKKVI
VMTLNGEKMQGLLMTIIKYLLPSDDHAIKKLLLIFWEIWPKTDADGKLRPEMILVCDAYR
KDLQHPNEFIRGSTLRFLCKLRQPELIEPLMPAIRTCLEHRHSYVRRNAVLAIYTIYRKF
DHLIPDAPELIHEFLEGEKDASCKRNAFMMLIHADQERALNYLTTCIDQVNTFNDILQLV
IVELVYKVCHANPNERARFIRCIYNLLQSSSSAVRYEAAGTLVTLSNAPTAVKLNCKFMQ
PCS

Nucleotide sequence

Length: 912

>Moocci.CG.ELv1_2.S656146.g31048.01.t
ATGTTTAATGAAAAAGCGCTCTGGTACCTATTGATTATGACATCTGCAGAGAGTATATGT
TATACTTTAATCAATGTTCCTTCGATTACCGATTCTGAGCCAACTAATGAAACCCAGCTA
AAAAATGACATTGAACATGGTGACTTAAGAACAAAAACAGAATCATTGAAAAAAGTCATC
GTTATGACATTAAACGGAGAAAAAATGCAAGGCTTGCTGATGACTATTATAAAATACTTG
CTTCCTTCGGATGATCATGCTATAAAGAAGTTACTTTTAATATTTTGGGAAATTTGGCCC
AAAACTGACGCTGATGGAAAACTGAGACCGGAAATGATACTTGTATGTGATGCTTATAGA
AAGGATCTGCAACATCCCAATGAGTTTATTCGTGGATCTACATTAAGATTTCTGTGTAAA
CTAAGACAACCAGAACTGATAGAACCACTTATGCCCGCTATTCGTACTTGCTTGGAACAC
CGACACAGCTATGTCAGGAGAAATGCTGTTCTGGCTATCTATACAATATACAGAAAATTT
GATCACCTAATACCTGATGCTCCTGAACTAATTCACGAATTTCTAGAGGGTGAAAAAGAT
GCTTCGTGCAAGCGTAACGCTTTCATGATGTTGATTCATGCTGATCAAGAAAGAGCTTTA
AATTATTTAACTACTTGCATTGATCAGGTGAATACCTTCAATGACATTCTTCAATTGGTG
ATTGTGGAACTTGTTTATAAAGTTTGTCATGCTAATCCCAATGAACGAGCCAGATTTATT
CGTTGCATTTATAACCTTTTGCAATCTTCAAGTTCTGCTGTAAGATACGAAGCTGCTGGA
ACGCTGGTTACGCTTTCAAATGCACCGACTGCTGTTAAACTAAACTGCAAATTTATGCAA
CCCTGTTCTTAA

InterProScan

PANTHER	COPB1 (IPR016460) - T[13-297] 4.4E-143
Gene3D	ARM-like (IPR011989) - T[28-302] 3.0E-61
Pfam	Clathrin/coatomer_adapt-like_N (IPR002553) - T[34-296] 2.6E-68
SUPERFAMILY	ARM-type_fold (IPR016024) - T[39-292] 6.14E-48

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
COPB_HUMAN	80.783 %	485	5.07E-166