- Transcript 'Cisavi.CG.ENS81.R417...' >
- Transcript 'Harore.CG.MTP2014.S1...' >
- Transcript 'Haaura.CG.MTP2014.S1...' >
- EST 'AHC0AAA236YC08_RM1' >
- Transcript 'Moocci.CG.ELv1_2.S65...'
Transcript Model
Transcript Id
Moocci.CG.ELv1_2.S657384.g31178.01.t
Possible name(s)
SRSF4; SRSF5; SRSF6
Gene model
Location
S657384 [22,258 / 24,886]
Amino acid sequence
Length: 339
>Moocci.CG.ELv1_2.S657384.g31178.01.p
MPASRVYIGRLNYRARESDIERFFRGYGKIRDIMLKNGYCFVEFDDDGDADDAVHDLSGK
ELCGDRVIIEHARGTPRGPGGNFIRDYYPPPPRNRGYSGGGGYGGDRYGGGRDRPRNNKG
YGPPRNTDYRLIVENLSSRVSWQDLKDYMRQAGEVTFADANRYRKNEGVVEFATYEDMKE
ALEKLDNTEVNGRRIKLIEDKKASRRRHKSSTSRSRSRSRDRSRRSRSGSRSRSRSHRKR
SRSYERKRSRSHSSSRSKSPAAKKRSSEKRSRSRDGSGDRSRNGSVDRQSEERVNGNDEQ
QDNSSQSPNRGDDRSPAGSHASSHGRSHSASHSRSPSPN
Nucleotide sequence
Length: 2,300
>Moocci.CG.ELv1_2.S657384.g31178.01.t
TGTTTTTCTTTCAAAGTTATAACGAAAAAGCTACAATTTTTATCATTTAACATGCCTGCA
TCACGAGTATACATTGGACGACTTAATTATAGAGCAAGGGAGAGCGATATAGAAAGATTC
TTCAGAGGATATGGCAAGATTCGTGACATCATGCTGAAAAATGGATACTGCTTTGTTGAA
TTTGATGATGATGGTGATGCTGATGATGCTGTGCATGATCTTAGTGGAAAAGAATTATGC
GGGGACAGAGTTATAATCGAACATGCTAGAGGTACACCTAGAGGACCTGGTGGAAATTTT
ATTAGGGATTATTATCCACCTCCACCACGTAACAGGGGTTATAGTGGTGGTGGTGGATAT
GGGGGAGATAGGTATGGAGGAGGTAGAGACCGGCCAAGAAATAATAAGGGATATGGACCA
CCAAGAAACACGGATTATAGACTTATTGTTGAGAATTTATCATCAAGAGTAAGCTGGCAA
GATTTAAAAGACTATATGCGGCAAGCTGGTGAGGTTACTTTTGCGGATGCAAATAGATAT
CGCAAAAATGAAGGTGTGGTAGAATTTGCTACATACGAAGACATGAAAGAAGCTTTGGAA
AAATTGGATAACACTGAAGTAAATGGGAGGCGAATAAAACTTATTGAAGACAAAAAAGCA
TCAAGGAGAAGACATAAATCGTCAACTTCAAGATCTCGTAGCAGAAGCCGTGATAGATCA
AGAAGGTCAAGGTCTGGAAGTAGAAGTCGATCCAGATCTCACCGTAAACGTTCTCGCAGT
TACGAAAGAAAAAGATCAAGGAGCCATTCAAGCAGTCGATCGAAGAGCCCAGCTGCCAAA
AAAAGGTCATCGGAAAAGCGATCAAGATCTCGAGATGGATCGGGAGACAGATCAAGAAAC
GGATCAGTAGATAGGCAAAGCGAAGAAAGAGTAAACGGAAATGATGAACAACAAGATAAT
TCAAGTCAATCACCTAATCGTGGTGATGACAGATCCCCTGCTGGCAGTCATGCATCTTCG
CATGGCAGATCGCATTCTGCCTCACATTCAAGATCACCAAGTCCAAATTAGTTACTGCTT
ACTGGATTATGATACATTTGGTAGTTAAATGCATAAAAACTAGCCAATTAAGTCAGGTAA
AACAGTCCATGATTTTAATTTCATTCAATGGAAGAATTAAGAATCACTATAGTGTTTATC
AAAACTGTAATACCTAATTTTTTACATTCAGTTTAACATTTTTTATTTCAGTTAGCATTG
GTTATCGTTTTTGGATATGGTATTTTATGAATTGCCTTTGCAATCAAAGAAAATTTTAAA
ATGTGTCTAATCTTTGGCTGCATTTATTAAATTCCGGTATTTTAAAAATAAATTGTATAT
TATGAATTTTAAACAATTTATAATGCTTTATTTTGTAATATTAATTTGTCCAAATTTTTT
TTAACCTAGAACATGGCCATTTTACAATGTCATGGTATACAGTGTCACAACTTACAACAC
AAATCAATCGAATTTGGTGGTACAATAATTCAAAATCAAACTTGATTTAGCAATGGCAAA
AATTTGGGGATGGTCCAATCTAATTGGCAAATACGACTAAATTAAGTGAAACAATCTATT
AAATTCTTTTAACTTGACATGGGCATTAAAATAAAATACATAACAAGATAACCTTATGTT
TTATTAAAAAAAAATTATTTTTTATTAATTGCAACTTCATGCAAGTAACTAAGTAAACTA
TTTTTTTTACCCGCCCTTAGTAAACATAAATGTTTTAAATTTATTTGTAGTATTTCGTTT
AAAAGTTTTATGACAACATAATATTTTATTAGCTAAATATCCTTCTCCAACCTAAGTGGC
TTCAATCTAATCAATTACAAATTTGGGGATTTGTGGCTGGTTTACTTAAACACATCTTCA
ATTGTTTGGTTCAATCAACAACAATTGTTGGTGTTGGCCCACCCTCCTTAATCATTGGTT
CTTGATTGGTTACAATTATTTCAAATGGTTTATCCACCTTCGTGAATATCCACAACAATT
ACTTGGTTTTTGGTTACAATTCTCTGCAAAATGCCCTGGTTCATTGGACTTAAAGTTTTC
AATAATTCAACCAATTCAGTAATTTCGTACATCTTTCGTTCTATTCAATTTTGGTTGGTT
TTGGTAGCATAATATAATGCTTTTTATCTTGATTTGGATCTAAGGTTTGTGTATTGTAAA
TACAGTTTAAAAATTTAATCCTGTGTTGTATATATTCGTCACGATTTTATCTTTGCTTTA
ATAAACGTATTAAAATAACA
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[1-120] 2.3E-19 - T[128-201] 1.1E-24 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[4-74] 15.733 - T[129-202] 12.441 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[4-84] 1.49E-33 - T[126-197] 1.49E-33 |
| SMART |
RRM_dom (IPR000504) - T[5-70] 1.1E-15 - T[130-198] 1.0E-13 |
| Pfam |
RRM_dom (IPR000504) - T[6-65] 4.2E-14 - T[131-196] 1.2E-12 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SRSF4_HUMAN | 64.039 % | 249 | 3.71E-79 |
| SRSF6_HUMAN | 59.709 % | 220 | 1.54E-69 |
| SRSF5_HUMAN | 59.296 % | 209 | 2.5E-66 |