- Transcript 'KH2012:KH.L172.2.v1....' >
- Transcript 'KH2012:KH.C4.182.v1....' >
- Transcript 'KH2012:KH.C2.97.v1.A...' >
- Transcript 'Boleac.CG.SB_v3.S4.g...' >
- Transcript 'Boleac.CG.SB_v3.S0.g...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S0.g00023.01.t
Possible name(s)
LRRC74A; LRRC74B; NLRC3
Gene model
Location
S0 [190,640 / 198,113]
Amino acid sequence
Length: 556
>Boleac.CG.SB_v3.S0.g00023.01.p
MADVESDAVLKGVIEGSEGPGQNQGTGEGEATGDNATMIEGASPVARPHSRGSVTPGKTI
SRISSAHSTKFSRPHTGSSLYSNGIRNDKDEEDSDGGYDTDLELEANREEYDTTGKTTYK
EACKQCGVIPVSYFLRHMQDSELVMRHHGLGPAGAKAIAVSLISNTRILKLDLSDNWLHG
KGGAAIADMLEENCYITELILSDNKLGCDGAKAICTVLQKNDNINSVNLSGNEFDSRAAE
HIADLLISNSQKVEYLNLSENHFDDPSGEILGPAIAENTSIKELNLSWNYFRLNGAVALA
RGIGANIFLKVVNISWNGLGLEGAVALREALMQNNVMEELDVSNNRIPVPGAIELAKGLM
DNDTLRVLKIGRNPMQTAGAFGILVALKENPKSAIETLDFTDIVVNKDFVELEKEIRESR
PKIQIIHGGAETEKKKPKPRPDPMSKLRKYVEENDMRMVDFFNQMDEDRSMSITHEELQR
GIEQAGIMLTQEEMKHLIEELDKDGDGEINYRRFGDFTITDKSSPEAYCLFSELVIGNLE
HLAKEKQKQKHDEDQD
Nucleotide sequence
Length: 1,698
>Boleac.CG.SB_v3.S0.g00023.01.t
AACTGGTATAGAAAAAGTTAAGGATAAATGGCTGATGTTGAATCAGACGCGGTATTAAAA
GGGGTCATAGAAGGATCCGAAGGACCGGGACAAAATCAAGGGACGGGCGAAGGTGAAGCT
ACAGGTGACAATGCTACGATGATCGAAGGCGCATCGCCGGTCGCTCGACCACACAGTAGA
GGAAGTGTAACACCTGGAAAGACAATAAGTCGCATCAGCAGTGCACATTCCACAAAATTT
TCCCGACCCCACACAGGGTCATCACTATATTCAAACGGCATCCGAAATGACAAGGATGAA
GAAGACAGTGATGGAGGATATGATACTGATCTTGAATTAGAAGCTAATCGAGAAGAATAT
GACACAACCGGAAAGACTACATACAAAGAAGCATGCAAGCAATGTGGAGTGATACCAGTT
TCCTATTTTTTGCGTCATATGCAAGATTCAGAACTTGTCATGAGACATCATGGTTTGGGA
CCCGCAGGTGCAAAAGCAATTGCTGTATCTTTAATTTCAAACACAAGAATTTTGAAGTTG
GACTTGTCTGACAACTGGCTTCATGGCAAGGGTGGTGCAGCAATTGCAGATATGCTTGAG
GAGAACTGCTACATTACTGAACTGATACTATCAGACAACAAATTGGGCTGTGATGGAGCC
AAAGCAATTTGCACAGTTCTTCAGAAAAATGACAACATCAACAGTGTAAACTTATCTGGT
AATGAGTTTGATAGCCGTGCTGCTGAACATATTGCTGATTTATTGATATCGAATTCACAA
AAGGTGGAATATCTCAACCTAAGTGAAAACCACTTTGATGATCCATCCGGAGAAATTCTA
GGACCGGCTATTGCTGAAAATACTTCAATCAAAGAATTAAATTTGAGTTGGAATTATTTT
CGTCTTAACGGAGCTGTCGCTCTTGCTAGAGGAATTGGTGCAAATATATTTTTAAAAGTT
GTGAACATCTCTTGGAATGGCTTGGGTTTGGAAGGGGCTGTTGCGTTGCGTGAGGCTTTG
ATGCAAAATAATGTGATGGAAGAACTGGATGTGAGTAACAACAGAATACCTGTCCCTGGT
GCTATTGAATTAGCGAAAGGGTTGATGGATAATGACACGCTACGAGTATTAAAAATTGGT
AGAAACCCAATGCAAACAGCGGGCGCATTTGGAATTTTGGTTGCATTGAAGGAGAATCCG
AAAAGTGCCATTGAAACACTTGATTTTACAGATATTGTGGTTAATAAAGACTTCGTTGAA
CTAGAAAAGGAAATACGGGAGTCACGGCCTAAAATACAAATTATTCATGGAGGAGCAGAA
ACTGAAAAGAAGAAACCAAAACCAAGGCCTGATCCGATGAGCAAGTTGAGGAAATATGTG
GAAGAAAATGACATGCGTATGGTAGATTTTTTCAATCAAATGGACGAAGATAGAAGTATG
AGTATAACGCATGAGGAACTTCAGAGAGGCATTGAGCAAGCTGGAATTATGCTTACACAA
GAAGAAATGAAACATTTGATTGAGGAACTGGACAAAGATGGAGATGGCGAAATCAATTAC
AGGAGATTTGGTGATTTCACCATCACTGATAAATCATCACCAGAAGCTTACTGTTTGTTT
AGTGAACTTGTCATTGGAAATCTTGAACATCTGGCTAAGGAGAAACAAAAGCAAAAACAT
GATGAAGACCAAGACTAA
| Gene3D |
LRR_dom_sf (IPR032675) - T[125-427] 6.3E-61 |
| Pfam |
Leu-rich_rpt (IPR001611) - T[164-187] 0.014 - T[193-215] 0.003 - T[250-268] 1.2 - T[278-300] 0.045 - T[306-327] 0.0089 |
| SUPERFAMILY |
EF-hand-dom_pair (IPR011992) - T[443-515] 7.12E-15 |
| ProSiteProfiles |
EF_hand_dom (IPR002048) - T[453-488] 9.994 - T[489-524] 9.353 |
| SMART |
EF_hand_dom (IPR002048) - T[457-485] 7.8 - T[493-521] 0.92 |
| CDD |
EF_hand_dom (IPR002048) - T[462-514] 3.54645E-10 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| LR74A_HUMAN | 37.65 % | 286 | 1.29E-90 |
| LR74B_HUMAN | 46.532 % | 297 | 7.14E-96 |
| NLRC3_HUMAN | 29.179 % | 100 | 4.51E-22 |