- Region 'REG00000772' >
- Clone 'ciad004j10' >
- Clone 'cien157863' >
- Clone 'cima8111024' >
- Transcript 'Boleac.CG.SB_v3.S0.g...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S0.g00028.01.t
Possible name(s)
CIITA; ERN1; ERN2
Gene model
Location
S0 [241,504 / 253,373]
Amino acid sequence
Length: 1,420
>Boleac.CG.SB_v3.S0.g00028.01.p
MVLAPECKAEVLSIAKKNSLFTESCLADDNFVSPNLEEQFIENEKAANAMFSSRKCHNKW
RSSNLXDILQSFKSGQLTLVGPAGSGKTTLVKMITQSVIQHKYEXLKNVEVVIIIDHAFE
ENVPATGMDLIFRSLLSAGMREKSRLMVMEHAVKYPETVLFVLDGLDIMKLEDGWPSHTK
DINEVALPAEHLKNFLSGRYLRGCRIITSGRYQILRSSDKKVYPNRXVAXSGFSKEGIEK
VIXGCLGKEKXERVLHRLEDKMKPLLSLCSSPAILKYTLCVIDTHDGIINTITEILMIIL
DRVQVDSSNKSDFQTIMEDLKLMAFEGVRDKDVLFSKTHLQRYGLSEEQVTALSLQCGWG
SDFKLIQKCSHCFFTHMSMQEAFAALYLAKLPRKEYNNFIQNKVNHPEFVLVRQFLHGML
XSYSKGNKYKFATVDDADFKLKQLFINDASILKKQFSGDGNLDYKEVLDIFYCLYESQQM
PNDIRLIIKNIEFKNLPISASDAHIIGWVIGCCSEIEGISFWNCTLNSPVFETLEEAVVK
RNVKIRSLNIHENDDFDPAAMVHIGKMAGHCSVDGMVFQGCGVSPKHIMNLQRNLVKINS
LIFWGKTKMGEDFLSAILPLIPKVSTYLALDMWEVSSSDKKAIQNALDELDDSDLKVNIY
PQEIIECSKKNIKRSRSIKSSDDGFQSKKRKYSTDIKPTRKHRETPVIADRMAARIQGKI
SQFSKSAELNELDLSYLPLHQTNAENVWSALTKKKTTENLKFRSCLKQGFIQHLQKHSAA
SLVPPVVVRVDVSANPDFGVQNATLLGNLLTTWKTTCLDLSECHFTYDEIIKLRDSTTTH
EIRKLLFNNNVMSPHTLTALSSFSASSCITALHLENCNLKNEHLEALESQVHRTKLETLD
LSYNREMASXGYAAVGRIVHKSLISSVLLVDCDTVLQELQSFQIEVNGKPLKHLDLSYND
ELVEDDTKRDVAKTLMLIGPATLSLSGCGADAEMLQDMANSSIGDKLTRLDIRDNPQLGQ
DSVEVVITIVKKLSLVTLDIDNCGWSVTIRTYQMIETADNYFCSEREYRGRFTPHQNVAL
FRHCGQADGRLCHATVCHSRCLYDTMEKCLNSIHYFSEEYRKTILLQVTHGLNHLHNFGI
VHGHVTPANILFPTNTGCRNVVLADFECHDVDEVSPTTMRHDIVLLADVFEYVLKNGDSG
REELQWRDAGIARRLLNDMRDTNRACSASDVLKHPFFWCDDKKINFLSRSVDILENKRKM
AKLDEKEIFADWIERLTLSSYEYDVCNQYLSDRERFCNRDAVKQRARKKHKGEKNTKLSE
LLKFFRNTKTHFCELVGPITWSFHDDETSRYWSFFAIRFPQLFYHVYDVMMEHELLNLKG
VREIYLETERENAPLPKFEEHIIKQELYEQECRYPTSPNE
Nucleotide sequence
Length: 5,335
>Boleac.CG.SB_v3.S0.g00028.01.t
ATTATAGAACAGTTCGTACATTTCATTTGTCGACGGTAATCTCCGCAAACACTAATCTTG
TCATCTGTGAGCCATTTGCTGCAATGAAAGACAAAAACGGACTATATGTACCACGGTCTA
TGATAAAACCAACGTGACATGCGAAAGTTAAGTGTTTGTTTGTTAATGCAAACAAATCAT
TCTATGGCATCAAGACTCACAAGGTCGATGAGGTAAAGAAATCAAGACAAAGTAAACAAG
GAGGATATTCAATCGTTGGCAAGGCCGAGGAATAAATCATCACTTGTCTATGCACAGCCT
GCAGACTCATTTAAAGCAGAAGATAGCATATATTGGTTGAAACTACATATCAGGATGGTG
CTTGCACCTGAGTGTAAGGCTGAAGTACTTTCCATAGCGAAGAAAAATTCCCTTTTCACA
GAATCTTGCTTGGCAGATGATAATTTCGTGTCGCCAAATTTGGAAGAACAGTTCATAGAA
AATGAAAAGGCAGCCAATGCCATGTTTTCATCTCGGAAATGTCATAACAAATGGCGCTCA
AGCAATCTTGNNGACATTTTACAATCTTTTAAAAGTGGACAACTTACCTTGGTAGGACCA
GCCGGAAGTGGNAAAACCACNTTAGTGAAAATGATCACTCAATCAGTGATACAGCATAAA
TATGAAANTTTGAAGAATGTTGAAGTGGTTATCATTATTGATCATGCATTTGAAGAAAAT
GTTCCTGCGACAGGGATGGATCTCATTTTCAGAAGTTTGTTGTCTGCGGGTATGAGGGAA
AAATCAAGACTTATGGTTATGGAACACGCTGTGAAATATCCTGAAACGGTTTTATTCGTA
CTTGACGGATTGGATATTATGAAATTGGAGGACGGTTGGCCTTCACATACAAAAGATATC
AACGAAGTTGCGCTCCCTGCTGAACACCTCAAAAATTTTCTATCTGGACGATATCTTAGA
GGGTGTCGTATCATTACATCTGGACGATACCAAATTCTTCGATCATCNGACAAGAAAGTC
TACCCCAACAGGATNGTAGCGNTGTCTGGATTTTCGAAAGAGGGNATAGAAAAAGTGATT
TNTGGATGCTTAGGAAAAGAGAAANCCGAAAGAGTATTACACCGTCTTGAAGACAAAATG
AAACCTCTGTTATCTTTATGTAGTAGCCCAGCTATACTCAAATATACTTTATGCGTGATT
GATACGCATGATGGGATTATCAACACTATCACCGAGATACTCATGATAATATTGGACCGC
GTACAAGTTGACAGCTCCAATAAATCGGATTTTCAGACCATCATGGAAGATTTGAAGTTA
ATGGCGTTTGAAGGAGTGAGAGACAAAGATGTTTTGTTCTCAAAAACGCATCTTCAGCGA
TATGGTTTATCTGAAGAACAAGTAACTGCTCTTTCGCTGCAATGTGGATGGGGCTCAGAC
TTTAAATTGATCCAGAAATGTTCCCATTGCTTCTTTACACACATGAGCATGCAGGAAGCG
TTTGCTGCTTTGTATTTGGCCAAGTTACCAAGAAAGGAATACAACAATTTTATACAAAAC
AAAGTTAATCATCCAGAATTCGTTTTGGTGAGACAGTTTCTCCATGGAATGTTGNGCTCT
TACTCTAAGGGGAATAAATACAAGTTTGCAACAGTGGACGATGCAGATTTCAAGCTCAAA
CAGTTGTTTATCAACGACGCTTCAATATTGAAGAAACAATTTTCCGGGGATGGTAACCTA
GATTATAAAGAAGTTCTTGACATTTTTTACTGTTTGTATGAAAGTCAACAAATGCCAAAC
GACATTCGACTTATCATCAAAAACATTGAATTCAAAAACCTTCCCATATCAGCAAGTGAT
GCTCACATTATTGGTTGGGTCATCGGCTGTTGCTCAGAGATAGAAGGAATTAGCTTCTGG
AATTGTACATTGAATTCACCTGTCTTTGAAACGTTGGAGGAAGCGGTCGTAAAAAGAAAT
GTCAAGATAAGAAGCTTGAACATTCACGAAAACGATGACTTCGATCCAGCGGCCATGGTT
CACATTGGAAAAATGGCAGGGCATTGTAGCGTTGATGGAATGGTCTTTCAAGGATGTGGA
GTCTCCCCTAAGCACATCATGAATTTGCAACGCAATCTAGTCAAAATTAACAGCTTGATA
TTCTGGGGTAAAACAAAGATGGGAGAAGATTTCTTATCAGCTATTCTTCCACTTATTCCG
AAAGTGTCAACTTATTTAGCGTTGGACATGTGGGAAGTCTCAAGCAGCGACAAAAAAGCC
ATTCAAAATGCACTTGACGAACTTGACGACAGTGACTTGAAGGTCAATATTTATCCACAG
GAAATCATTGAATGCAGCAAGAAGAATATTAAACGCTCCCGTTCTATTAAATCAAGTGAC
GATGGTTTTCAATCTAAGAAAAGGAAATATTCAACAGACATAAAACCGACTCGAAAGCAT
CGAGAAACTCCGGTCATCGCTGATCGCATGGCTGCGCGGATCCAAGGGAAAATTTCACAA
TTTTCAAAATCCGCCGAATTAAATGAGCTGGATTTGTCATATCTACCATTGCACCAAACG
AACGCTGAGAACGTTTGGAGCGCATTAACAAAAAAGAAAACAACAGAAAATCTGAAATTT
CGATCATGTCTGAAACAAGGGTTCATTCAACATCTCCAAAAGCACAGTGCAGCATCATTA
GTGCCGCCTGTGGTCGTGAGAGTTGATGTGAGTGCAAATCCGGATTTTGGAGTGCAAAAT
GCGACGTTATTAGGGAATCTCCTGACGACGTGGAAGACTACATGTCTTGATTTGAGTGAA
TGCCACTTCACGTACGACGAAATAATTAAACTCCGTGACTCTACAACAACGCATGAGATA
CGAAAGCTTCTATTTAACAACAACGTTATGAGTCCGCACACATTGACGGCATTATCAAGT
TTTTCTGCTTCTTCTTGCATCACTGCCTTACATTTGGAAAATTGTAATTTGAAGAACGAA
CACCTTGAAGCTCTAGAATCCCAAGTACATCGCACAAAGCTGGAAACACTCGATCTGAGC
TACAACAGGGAAATGGCTAGCAANGGATATGCAGCAGTTGGACGGATTGTACATAAATCA
CTTATTTCAAGTGTCCTTTTGGTCGACTGCGATACAGTACTTCAGGAATTGCAGAGCTTC
CAAATCGAAGTGAACGGAAAACCACTGAAGCATCTAGACTTGAGTTACAACGACGAACTT
GTAGAGGACGATACTAAAAGAGATGTTGCGAAAACCTTGATGTTAATTGGACCAGCCACT
CTTTCTTTGTCCGGATGTGGTGCTGACGCCGAAATGCTGCAGGACATGGCAAATTCCTCA
ATAGGAGATAAGCTCACTCGTCTGGATATAAGAGATAATCCACAATTAGGACAGGACTCC
GTTGAAGTTGTTATTACGATCGTGAAAAAATTGTCTCTTGTCACTCTTGATATTGATAAC
TGCGGGTGGAGTGTCACCATAAGAACCTATCAGATGATCGAGACTGCTGACAACTACTTC
TGCTCCGAACGAGAGTACCGTGGTCGATTCACGCCACATCAAAATGTCGCTCTTTTCCGC
CATTGCGGCCAGGCCGATGGGAGATTATGCCACGCCACAGTGTGTCATTCGAGATGCTTG
TACGACACGATGGAAAAATGTCTAAACAGCATTCACTACTTCAGTGAAGAATACAGGAAA
ACCATACTCTTACAAGTCACACATGGACTTAACCATTTACACAATTTTGGAATCGTACAC
GGTCACGTGACTCCAGCAAATATCCTCTTTCCCACCAACACAGGATGTAGAAACGTGGTT
CTCGCGGATTTTGAGTGTCATGACGTCGATGAAGTATCTCCCACAACTATGCGTCATGAT
ATCGTTCTATTGGCTGATGTTTTCGAGTATGTGCTCAAAAATGGTGACAGTGGCCGAGAA
GAATTGCAATGGCGAGACGCTGGAATAGCCCGTCGTTTGTTAAATGATATGAGAGACACA
AATCGCGCGTGCTCTGCAAGTGATGTTTTGAAACATCCTTTCTTTTGGTGTGATGATAAA
AAGATAAATTTCTTATCTCGTTCGGTTGATATTTTGGAAAACAAAAGAAAAATGGCAAAG
CTGGACGAAAAAGAAATATTTGCAGACTGGATAGAGCGTTTAACCTTGTCATCATATGAA
TACGATGTATGTAATCAGTACCTATCGGATCGCGAACGGTTTTGTAACCGTGACGCTGTC
AAGCAGCGAGCACGAAAAAAGCACAAGGGGGAGAAAAATACAAAATTGTCGGAATTGCTC
AAGTTTTTCCGCAACACAAAGACTCATTTCTGTGAATTGGTTGGTCCAATCACTTGGTCT
TTTCACGATGATGAAACATCGCGATATTGGAGTTTTTTCGCNATAAGATTTCCACAGTTA
TTTTATCACGTGTACGATGTCATGATGGAACACGAACTATTAAACTTGAAAGGCGTTCGA
GAAATTTATCTGGAAACAGAACGTGAAAATGCTCCTCTTCCAAAATTTGAGGAGCATATA
ATAAAACAGGAGTTGTACGAGCAAGAATGTCGTTATCCAACATCGCCAAATGAGTAATGG
CGTTGTTTGCGACTCGTCAAGCAGTCACAAATTATCAGAAACATGCACATTTGACCGTTG
TTGTGGTCAAATGTGGCAAACTGAATAAAGACTTCCTATACCCATACGTTACCTCTGTTT
CAAGCCCTTCCGCTATACAAACACGTATATGATAAACATTGATTTCAAGATGAAGGGTAT
ATATTCGTGTGACGTTCTTCAAAATTGTAAATCCGGAACAGCAAGATTATATTTTTAGTA
ACAATATTGCAATTCTGTCTGCGGTAGCTTTCTAGCTCATATACTGTACCTGAAGTAGAG
CTCCAGCGAGACAAAATGTTCCAGCAATTGCGCCCAACGGTCCTACGTTCATTCCAATTA
CAAAAACTAATGTGCTTCTATCACACATTTTGTCCAAGCCTTGGGTACAATACTTTATAC
ACAAGGGTTTAATTTCGATTCAGTGATCTTCAAATATACCTACATCAGATTTTACAAATT
GCGTCAGCTATACGGTAACCATGGTACTGTATTAACCTTCGCTATATTTCAAAATGCTTT
TTTCATATATGTTGCATATTCAATGGAGTAGCCACACTATTTGCTTATTCCGAAGTTGTA
TCAACGTGATGCATACATAGCCTACCACGAATGGAAAATTCTATTTTATTGATCTCTGCT
CTAGCTTACTTATCCTTTCGGATAACAAATTTACTGAAACAAACCTATTAGTGCT
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[65-269] 1.21E-7 |
| ProSiteProfiles |
NACHT_NTPase (IPR007111) - T[75-211] 10.712 |
| Gene3D |
LRR_dom_sf (IPR032675) - T[713-1062] 4.3E-24 |
| SMART |
Prot_kinase_dom (IPR000719) - T[1010-1237] 0.0029 |
| ProSiteProfiles |
Prot_kinase_dom (IPR000719) - T[1012-1290] 9.772 |
| SUPERFAMILY |
Kinase-like_dom_sf (IPR011009) - T[1044-1171] 3.05E-16 |
| Pfam |
Prot_kinase_dom (IPR000719) - T[1053-1167] 2.6E-8 |
| Gene3D |
KEN_sf (IPR038357) - T[1240-1382] 1.7E-9 |
| ProSiteProfiles |
KEN_dom (IPR010513) - T[1240-1388] 14.257 |
| Pfam |
KEN_dom (IPR010513) - T[1308-1373] 1.4E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|