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TRANSCRIPT CARD

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  1. Clone 'cima014i21' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'KH2012:KH.C4.584.v1....' > 
  4. Transcript 'Boleac.CG.SB_v3.S0.g...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S0.g00030.01.t

Possible name(s)

Boleac.CG.SB_v3.S0.g00030

Gene model

Boleac.CG.SB_v3.S0.g00030

Location

S0 [268,381 / 271,642]

Sequences

Amino acid sequence

Length: 236

>Boleac.CG.SB_v3.S0.g00030.01.p
MDWGRVPECVKFCGTGSLTTGSGDRLYIDKTTKNWRRWVYHKQHKKIPDLCVNIYGNKRL
IERIETTAVAISSGYQHVAEEQFQHTMDVAMEQLSNARSDSAEALDRLGKICLQVSDWAK
AITCFEYSYHMRIVMYGIDTDHKKTLESLVYLGTAWAEYENLHRAIIVFEKALEMAKNLS
EKGANRDERVAEVLHNLGCCWERLHEHHTALSCYEKSEKIRRRITTISTTAPRHLN

Nucleotide sequence

Length: 942

>Boleac.CG.SB_v3.S0.g00030.01.t
GTTGGTAATTTTAGTTCAGTCGTGAGTAGTAGCTTACAGAAGATTGTTTTTGCAAATATC
ACCCGTAATTGTAATACGGATGGATTGGGGAAGAGTTCCTGAGTGTGTTAAATTCTGTGG
AACTGGAAGCCTGACGACTGGCTCTGGTGACAGGCTTTACATAGACAAAACGACAAAGAA
CTGGAGGCGATGGGTATACCACAAACAACACAAAAAGATTCCTGATTTGTGCGTTAATAT
TTACGGAAACAAAAGACTTATCGAACGGATAGAAACAACCGCCGTTGCAATTTCCTCCGG
ATACCAGCATGTTGCTGAAGAGCAGTTTCAACATACAATGGACGTAGCGATGGAGCAACT
CTCAAATGCAAGATCCGACAGTGCAGAGGCACTAGACAGGCTTGGAAAAATATGCCTTCA
AGTAAGCGACTGGGCCAAAGCCATCACGTGTTTCGAATACTCATATCACATGCGAATCGT
AATGTACGGCATTGATACTGATCATAAAAAGACACTGGAATCACTGGTATATCTCGGAAC
AGCCTGGGCGGAATATGAAAACCTTCACAGGGCGATAATTGTGTTTGAAAAAGCATTAGA
GATGGCCAAAAATCTATCCGAGAAAGGAGCAAACCGCGATGAAAGAGTGGCAGAAGTGTT
GCATAATTTGGGTTGTTGTTGGGAGAGGCTTCATGAACATCACACCGCACTCTCTTGTTA
TGAAAAGTCGGAGAAAATACGCAGACGAATCACAACGATTTCTACCACTGCCCCACGACA
CTTGAACTAGAAAACATTATATTTATGACGACTTATAGGATTCTTTATTATTTTTAAGTA
CACTGATTTTTTATACTCAAAGGATAGCCGGCTGTAGCTATATGCTGATGAAACTGCCTC
GTGCGATGTTACGAAATTTATCTGATTGTTGATGAGGAGCGG

InterProScan

Gene3D
TPR-like_helical_dom_sf (IPR011990) - T[39-231] 1.8E-19
SUPERFAMILY
TPR-like_helical_dom_sf (IPR011990) - T[92-221] 1.71E-15
ProSiteProfiles
TPR_repeat (IPR019734) - T[102-135] 5.753 - T[146-179] 8.555 - T[191-224] 6.461
SMART
TPR_repeat (IPR019734) - T[102-135] 91.0 - T[146-179] 10.0 - T[191-224] 0.058
Pfam
TPR_repeat (IPR019734) - T[104-128] 4.8E-4 - T[194-216] 0.0091
ProSiteProfiles
TPR-contain_dom (IPR013026) - T[146-179] 8.823 - T[191-224] 6.667

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value