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TRANSCRIPT CARD

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  1. Transcript 'Boleac.CG.SB_v3.S0.g...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S0.g00146.01.t

Possible name(s)

SRSF3; SRSF4; SRSF7

Gene model

Boleac.CG.SB_v3.S0.g00146

Location

S0 [1,340,137 / 1,344,369]

Sequences

Amino acid sequence

Length: 248

>Boleac.CG.SB_v3.S0.g00146.01.p
MPGPVECKVYVGNLGSQGSKGELERVFGYYGNLTNVWVARNPPGFAFVEFENERDARDAV
RALDGRTICGVRARVEHSSTRQSGNRRGGRYGGGYNDYRYNDQHYNDRRRRRLKFQLCPY
TYKEYKIVIGLGQEAQDVGTPAAGVEAMSVTTKGEGVDLGARKGVQSGERVGNQTAEADP
SLRMVEEAIRDHPRLMKETVGVRAEAGVGVGRQTKTNAHLSQTIFYYVFCLSATFVASPT
LNYFTCST

Nucleotide sequence

Length: 1,480

>Boleac.CG.SB_v3.S0.g00146.01.t
GTTCGGCTGTCGGCCAAGTCTACCAGGTCTTTGCTCGTGCCTCAACTGGAGTGGGAAGCT
TGCGTCNAGAAACATTTCCGGNTACATTGGAAAGTATAAAGAATCGAGGCTATAGTGTAA
GCACTTGCACCTTCCTAACGCTGTACGGCAACACTCCAGAAATAAAAGCTTCGGTATACC
GTTTTCGGTAACGCTGGTGAGATTACGTGCTACGAAGCTGTAAAAAGACAGAAATGCCTG
GCCCAGTTGAGTGCAAAGTCTACGTTGGTAATCTAGGATCACAAGGTTCAAAGGGTGAAC
TGGAACGAGTATTTGGCTATTACGGTAACTTGACCAACGTCTGGGTAGCCAGAAACCCGC
CTGGATTCGCTTTTGTCGAATTCGAGAATGAAAGAGACGCACGTGATGCTGTCAGAGCCT
TGGATGGAAGAACAATATGTGGCGTGAGGGCTCGTGTTGAACACTCCAGTACTCGTCAAA
GTGGAAACCGCCGAGGTGGCCGTTATGGTGGAGGCTATAATGATTATCGATATAATGATC
AGCATTACAATGATCGTCGCAGGAGGAGACTCAAATTCCAGTTGTGTCCATACACTTATA
AAGAATATAAAATTGTTATAGGTCTCGGTCAAGAAGCCCAAGACGTAGGTACTCCCGCAG
CCGGAGTCGAAGCAATGAGCGTTACAACAAAAGGAGAAGGAGTAGATCTAGGAGCCCGGA
AAGGAGTCCAGTCAGGCGAGAGAGTCGGGAACCAAACAGCAGAGGCAGATCCATCACTCC
GAATGGTAGAAGAGGCGATTCGAGATCACCCACGCCTAATGAAAGAAACGGTAGGAGTCC
GAGCAGAAGCAGGAGTAGGAGTAGGTCGTCAGACTAAGACTAACGCACACCTTTCACAAA
CAATCTTTTACTACGTTTTCTGTTTGAGTGCGACTTTTGTTGCATCACCTACCCTGAACT
ATTTTACATGCAGTACCTAGAATGCTGTAATTCTTCAAGGCATGTTTGAATAAAGCAGTT
TGTCTGTACCACCGATATTGCATGATCTTGCTTTTGAATCTATATAGGCTATCGGATGTG
GATTTACGCCTTTCATGGCCACCCCACCCCCCGAAAATTTAGGAAAGAGGTACCGGTGTT
GTACTGGTGTTAGACTATCTAGAAGGGAATTTGAGTTTGAGTACTTTGTTCTTCAGTTTC
TTCAAGGGTGATACGTGGTTGGACTCGCGTTTTTTATCGGACTCGTCCTCTGGAGCATAT
GCTCGCACTTTAGCGAAAGCCAGGAGAACTTCTGTGTCGACGCTTGGCCGTCGTTGATTA
GGACAGACGGTGGCTATTGCTTCGGATTTAGACGAAATGCCCGTTGCAGCTTCCTCGCAT
TCCGGCTCGGAATCCGACCAAGAACTCCCAGACAGCTTCCTGCCGGTCTTCTCAGCTTTC
TTATGCTGGTGACGAAATAAACCTCCTGGCTTGTCGGCCC

InterProScan

Gene3D
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[3-113] 6.5E-22
SUPERFAMILY
RBD_domain_sf (IPR035979) - T[6-108] 1.25E-24
ProSiteProfiles
RRM_dom (IPR000504) - T[7-80] 16.551
SMART
RRM_dom (IPR000504) - T[8-76] 6.7E-19
Pfam
RRM_dom (IPR000504) - T[9-70] 1.4E-15

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SRSF3_HUMAN 69.412 % 125 5.46E-36
SRSF7_HUMAN 71.622 % 112 2.34E-30