- Clone 'AHC0AAA129YP24' >
- Transcript 'Cisavi.CG.ENS81.R451...' >
- Transcript 'Moocul.CG.ELv1_2.S99...' >
- Transcript 'Boleac.CG.SB_v3.S100...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S100.g00383.01.t
Possible name(s)
COL11A2
Gene model
Location
S100 [41,825 / 58,146]
Amino acid sequence
Length: 1,719
>Boleac.CG.SB_v3.S100.g00383.01.p
MGTSTSSIVSSQYWKWTRAKIWTICLVTLLLQFGQPSSAERHDLLAAIDETDKLRLTEVS
VDCEGGSRQGYEFERDTSLEIRTRNVFPTGFPTEFTXLANIRPTMKFKSTYLMSLIHPDD
WLQLGALVGTKPEFIYQDQKRPKRERANPKLATNASPIDLPKNEWHRVAWSVYNERVQLY
VDCRMIIDTNITXTEKSLNGDGMIILGSPRHGPRGFQGTIAQLEITDDPTHAGVMCTXDY
SAKCGTRYAAGAVAAPVERTFSDEPAPSEPDVDSLVIPSGQPGTDSGGRGDGSGSSTPSP
PASTPPPSGTVKGQKGEKGDPAVLEPDVFIPGPPGPQGQKGDPGPMGYQGPPGKAGESGA
AGQPGRDGLKGQKGLPGPAGRHILIPFRAPSGLGGSKGPGGDHVAELRAQGMLDAARLAL
KGPPGPIGMPGVRGTSGVPGVQGIKGDVGDPGPMGVRGQRGLPGQPGLTGKPGRPGQSGV
RGMPGPPGDKGARGYDGRPGMIGPKGHNGEPGGQGPPGNQGEKGVAGKPGPVGPRGSPGN
AGTRGEIGPKGASGPKGPPGPRGVDGPQGIKGSLGPQGLPGPIGHKGPPGLQGIPGPQGL
MGPIGEKGPLGKPGLPGLPGQDGSPGHPGREGSTGSKGAIGPPGPDGPTGFPGTRGIKGE
PGIRGLKGVKGEKGNDGLSGFKGDMGPKGDHGPIGPTGRRGEDGPDGMKGREGQRGEVGP
PGPLGEKGNIGVTGIPGYQGGKGPKGSKGSRGRIGTGGLKGSKGPEGKTGPQGERGARGL
TGSRGPRGSTGKPGEKGGRGQDGPEGPVGERGPPGPQGTVGPTGVKGPPGPSGKDGLPGH
PGARGETGFQGKNGPPGPAGVIGPQGPPGEMGQTGVRGHPGTPGPAGEVGLPGQSGKEGP
KGDDGPPGPKGQIGLPGIQGFPGDRGNAGVKGPPGLKGSEGPAGAPGPQGSPGNRGPPGP
AGEIGAQGRPGPVGPTGTAGEKGDNVXIHXIIMGEVGPVGPAGRDGLQGPPGQAGPPGPD
GDRGIDGDKGELGPPGQAGHKGSKGDPGPPGPPGQMGGAGPAGLAGSDGEPGVRGQQGLH
GAKGDEGTRGFPGSPGPRGLRGFPGQSGEKGDPGDDGPLGPPGPQGKTGPQGPPGVIGPM
GPTGATGSPGDVGPKGEPGSAGSPGSSGKPGGKGEKGEAGLNGERGPAGQPGERGPMGSQ
GLDGPKGNQANIETRRCYVTSVLTSFTLSRDQSDIQEIQDPRVAWDHLVWMVYQVKEEIM
VQRDLRDHQDLLEKLGHLDQWDHGYGPAGDTGQEGRAGEKGAKGDIGSPGPTGNTGAVGS
RGATGKQGVEGIMGPPGPVGEPGLPGSTGPTGAPGKLGMQGIRGEKGDQGVSGQKGHEGL
SGVPGQKGDMGEKGERGLQGPDGPQGSKGDEGRDGPAGPLGPQGPPGLPGQTGIKGNKGS
EGPHGPKGEPGLEGAPGPPGPPGQVVNVSPPTTEGSRRRKRDIIDAMAEHPPGMEEIFAM
LDSLIHEVRMTKAPTGSPDHPARSCKDLALCHPDFQDGPYWIDPNGGCINDSIQVECRFG
KTEVATCITPETYYVILQQKPMRWPKATPGSWFSSYIKGYRFKYPVHETQLKFLRLLSVT
ASQNFVYDCVSSVGWQDSEGSYDRAIHLRGANDVTITKDSPDVTVLSDSCSDGSGTGRVE
ITVETKDVDMLPLYDYKSFDLGERYQRHGFHLEQICFVS
Nucleotide sequence
Length: 5,828
>Boleac.CG.SB_v3.S100.g00383.01.t
CGCCGAACGAGAAGATTACACCCTTTGCTTCCTCTCTATTGGGGGCGCAGAGAGGGGAAA
GAAGACGGCGAGAGAAGTAATCGGAANCGAGCGCCGAAGTACCTCAGGCGCAAAGTTGCT
CTAGTAGCTCATCGCCGGACGGAGACAGCAGACGAAGAACGAGGCTGAAACGGGCGCATC
GTTCGCCAGCCACGGAGGCGAAAACTGCGCAATTGCCGGCGACACAATGGGCACCAGCAC
GTCGTCCATTGTTTCGTCGCAATATTGGAAATGGACTCGGGCGAAAATATGGACGATATG
CCTCGTGACTCTGCTACTACAGTTTGGACAACCGTCATCGGCCGAACGCCATGACTTGCT
GGCAGCGATCGACGAAACCGACAAGCTCAGGCTCACGGAAGTTTCGGTTGATTGCGAAGG
TGGATCACGTCAGGGTTACGAATTCGAACGCGACACGTCATTGGAAATACGCACCCGAAA
CGTGTTTCCTACCGGATTTCCTACGGAATTCACGATNCTGGCNAATATCAGGCCAACAAT
GAAATTTAAATCAACCTACCTCATGTCATTGATACATCCAGATGATTGGTTGCAATTAGG
TGCTTTGGTCGGAACAAAACCAGAGTTCATCTATCAAGATCAGAAAAGACCAAAACGCGA
AAGGGCGAACCCTAAGCTGGCTACCAATGCATCACCAATCGATTTGCCTAAGAATGAGTG
GCACAGAGTGGCATGGTCAGTTTACAACGAGCGCGTTCAGTTGTACGTAGATTGCCGAAT
GATAATAGATACGAATATCACAAANACTGAGAAGTCGCTCAATGGTGATGGTATGATCAT
TCTTGGTTCTCCAAGACACGGACCGAGAGGATTTCAGGGCACCATAGCACAACTCGAAAT
CACAGATGACCCGACTCATGCTGGAGTTATGTGCACGNCCGATTACTCAGCGAAATGTGG
AACCCGTTACGCCGCTGGCGCCGTCGCCGCTCCTGTCGAAAGAACATTCTCCGACGAGCC
TGCACCGTCAGAACCAGATGTCGATTCTCTTGTAATACCAAGTGGTCAACCGGGAACTGA
TTCCGGTGGGCGTGGTGATGGATCTGGTTCATCAACGCCGTCGCCACCCGCGTCAACACC
ACCACCTTCCGGTACAGTCAAAGGGCAGAAAGGCGAAAAAGGAGATCCAGCTGTTTTGGA
ACCGGACGTGTTCATTCCTGGGCCACCCGGACCTCAAGGTCAAAAGGGAGACCCTGGTCC
TATGGGATACCAAGGTCCGCCAGGAAAAGCAGGGGAATCTGGAGCGGCGGGACAGCCCGG
GCGAGACGGTTTGAAAGGTCAAAAAGGATTGCCAGGACCAGCAGGACGCCATATATTGAT
TCCATTCAGAGCACCATCCGGACTAGGCGGAAGCAAAGGTCCAGGAGGTGATCACGTTGC
CGAATTAAGAGCTCAAGGAATGTTGGATGCAGCAAGGCTTGCGTTAAAAGGCCCTCCAGG
ACCTATTGGAATGCCAGGAGTCAGAGGAACATCAGGCGTACCTGGCGTCCAGGGAATCAA
AGGAGATGTTGGAGATCCGGGTCCTATGGGAGTAAGAGGTCAAAGGGGACTGCCAGGACA
GCCTGGTCTGACTGGAAAACCGGGTCGACCAGGACAGTCTGGAGTGCGAGGCATGCCGGG
ACCTCCTGGAGACAAAGGTGCCAGAGGCTATGATGGACGACCTGGAATGATTGGACCGAA
GGGCCATAATGGTGAGCCCGGTGGACAAGGTCCCCCAGGAAATCAAGGAGAGAAGGGCGT
TGCTGGCAAGCCTGGTCCTGTGGGCCCACGAGGTTCCCCAGGCAATGCTGGAACGAGAGG
TGAGATCGGACCAAAAGGTGCTTCAGGACCCAAAGGCCCTCCGGGCCCGAGAGGAGTGGA
TGGACCACAAGGTATTAAAGGAAGCCTTGGACCTCAGGGATTACCGGGACCAATTGGTCA
CAAGGGACCTCCTGGCCTCCAGGGAATTCCTGGTCCTCAAGGGCTGATGGGTCCAATAGG
AGAAAAGGGTCCTCTTGGTAAACCTGGTTTGCCAGGATTACCCGGACAAGATGGTTCTCC
AGGTCATCCAGGTCGAGAGGGCTCAACAGGATCAAAGGGCGCGATAGGTCCGCCAGGTCC
AGATGGTCCAACTGGGTTCCCAGGAACAAGAGGAATAAAGGGTGAACCAGGAATCCGTGG
TCTCAAGGGTGTGAAAGGAGAAAAGGGAAATGATGGTTTGTCTGGCTTCAAAGGCGACAT
GGGACCTAAAGGAGATCACGGTCCGATTGGTCCTACTGGTAGACGGGGTGAGGATGGTCC
AGATGGAATGAAAGGACGTGAGGGACAACGAGGAGAGGTCGGACCTCCAGGTCCACTAGG
AGAAAAGGGAAACATCGGAGTTACAGGCATTCCAGGCTATCAGGGAGGAAAAGGTCCAAA
GGGATCGAAAGGTTCAAGAGGAAGAATTGGCACTGGTGGCCTGAAAGGATCCAAGGGTCC
GGAAGGGAAGACAGGACCGCAAGGTGAAAGAGGAGCCAGGGGCTTGACTGGAAGTCGCGG
ACCCCGCGGATCGACCGGAAAGCCTGGTGAAAAGGGTGGCCGAGGTCAAGATGGTCCTGA
AGGCCCTGTCGGAGAAAGAGGTCCACCAGGACCTCAAGGTACTGTTGGTCCAACTGGTGT
GAAAGGACCTCCGGGACCTTCGGGCAAAGATGGATTACCAGGTCATCCTGGAGCAAGAGG
AGAAACGGGATTTCAAGGCAAAAATGGACCACCGGGACCAGCAGGTGTTATCGGTCCGCA
GGGGCCACCAGGTGAAATGGGACAGACAGGAGTTCGAGGACATCCGGGAACTCCAGGTCC
AGCTGGTGAAGTNGGTCTTCCAGGTCAATCTGGCAAGGAAGGACCAAAAGGAGACGATGG
TCCACCTGGTCCCAAAGGTCAAATAGGTCTGCCTGGTATTCAAGGTTTCCCCGGAGACCG
AGGCAATGCTGGTGTGAAGGGTCCACCTGGACTTAAAGGAAGCGAAGGACCAGCAGGAGC
TCCCGGACCACAGGGCTCACCAGGGAATCGCGGTCCTCCTGGGCCAGCTGGAGAAATTGG
AGCTCAGGGTCGACCTGGCCCTGTGGGTCCGACTGGCACTGCTGGAGAGAAAGGAGACAA
TGTATNAATTCACTTNATAATTATGGGCGAAGTTGGCCCAGTGGGACCTGCGGGTCGCGA
CGGCTTGCAGGGACCACCAGGACAAGCTGGACCGCCTGGCCCAGATGGGGATAGAGGTAT
TGACGGTGATAAAGGTGAACTGGGTCCCCCAGGGCAAGCTGGACATAAAGGAAGCAAGGG
TGATCCTGGCCCGCCAGGTCCCCCTGGACAAATGGGTGGAGCTGGACCAGCCGGTCTGGC
TGGAAGCGATGGTGAGCCTGGAGTTCGAGGACAGCAAGGTCTTCATGGGGCAAAGGGTGA
TGAAGGTACTAGAGGATTTCCTGGTAGTCCTGGTCCTAGGGGATTGAGAGGTTTCCCTGG
ACAGTCTGGAGAGAAAGGTGATCCTGGAGATGACGGTCCTCTTGGACCTCCTGGCCCGCA
AGGCAAGACCGGCCCACAAGGTCCTCCTGGAGTAATTGGCCCAATGGGTCCTACGGGAGC
GACTGGAAGTCCGGGTGATGTTGGACCGAAAGGAGAGCCTGGATCAGCTGGTTCACCAGG
AAGTTCTGGTAAGCCAGGAGGAAAAGGAGAGAAGGGTGAAGCAGGCTTGAATGGAGAGCG
TGGTCCGGCTGGTCAACCTGGAGAAAGGGGGCCAATGGGATCACAGGGATTGGATGGTCC
GAAAGGAAATCAGGCAAATATTGAAACACGTCGTTGTTACGTAACATCTGTCTTAACTTC
TTTTACTCTATCTAGGGACCAATCGGATATCCAGGAGATCCAGGACCCCAGGGTGGCATG
GGACCACCTGGTGTGGATGGTTTACCAGGTAAAAGAGGAGATAATGGTGCAAAGGGACCT
CAGGGACCACCAGGACCTTCTGGAGAAGCTGGGTCATCTGGACCAATGGGACCACGGGTA
TGGTCCTGCTGGAGATACAGGTCAAGAAGGACGAGCTGGTGAAAAGGGAGCGAAGGGCGA
CATTGGATCGCCTGGACCGACTGGAAACACAGGTGCGGTTGGGTCACGAGGAGCAACTGG
AAAGCAAGGAGTTGAAGGAATTATGGGACCACCAGGTCCTGTGGGTGAACCCGGTCTACC
AGGATCGACAGGACCTACAGGTGCACCAGGAAAACTGGGTATGCAAGGTATTCGTGGAGA
AAAGGGAGACCAAGGAGTATCAGGACAAAAGGGACATGAAGGTCTAAGTGGAGTACCTGG
CCAAAAAGGAGACATGGGAGAGAAAGGCGAACGTGGATTACAAGGACCTGATGGCCCGCA
AGGATCTAAGGGTGATGAAGGACGAGACGGCCCAGCTGGCCCACTCGGTCCACAAGGACC
TCCTGGTCTTCCGGGTCAAACTGGAATCAAGGGCAACAAAGGATCTGAAGGACCTCACGG
TCCTAAAGGAGAACCAGGCCTGGAAGGTGCCCCAGGACCACCGGGGCCGCCAGGACAAGT
TGTTAATGTGTCACCGCCAACCACCGAGGGAAGTAGAAGACGAAAACGAGACATCATTGA
CGCAATGGCAGAACATCCACCTGGCATGGAAGAAATATTTGCTATGCTCGACTCATTGAT
TCACGAAGTAAGAATGACGAAAGCGCCGACAGGAAGTCCTGATCATCCCGCGCGTAGTTG
CAAAGACCTGGCTCTGTGTCATCCTGATTTCCAAGACGGGCCTTACTGGATCGATCCAAA
TGGTGGATGCATCAACGATTCAATCCAAGTCGAATGTAGATTTGGAAAAACAGAAGTCGC
CACTTGTATTACGCCTGAAACATATTACGTTATTTTGCAGCAAAAACCGATGCGTTGGCC
GAAGGCGACTCCTGGATCGTGGTTTAGTTCTTACATCAAGGGATATAGATTCAAGTACCC
CGTGCACGAAACACAGCTGAAGTTCCTGCGCTTGCTATCCGTAACTGCTTCACAGAATTT
CGTTTATGATTGCGTTAGTTCTGTAGGCTGGCAGGATTCTGAAGGAAGTTACGATCGGGC
GATTCACTTGCGTGGTGCCAACGATGTCACCATCACGAAAGATTCGCCTGATGTTACAGT
GTTATCAGACTCTTGCTCTGATGGCTCCGGAACAGGAAGAGTGGAAATAACCGTGGAAAC
GAAGGATGTCGATATGTTGCCGTTATACGACTACAAGTCATTCGACCTTGGCGAACGATA
TCAACGTCATGGATTTCATCTTGAGCAGATTTGCTTTGTAAGCTAAACGATTCGTAATCG
AGGAAATCGAGGAATTTGATGCGCGCGCACCTGTCGATGGAAATGCTCTCCGCGCGTCAG
AACTGGGCTGCTACCAACCCTGGTATGTGGCACTGGGGCAATCGATACTTGGACTGTGAC
GAAAATATATTTTTGTACTTTCCTTTCTGTGTTACTTTCGTGTTCTTGAAATGTTCTGCA
TAGTGCTGGATGCTTATCATTTCAAGTTGCACGATGAATTTCTTCAACTCCCAATCAATC
GGCGAACCGAGCCTGGAAATAGGTTTATTTGTGCTGGAGTAAACTTATTTGCAAGTTCAA
CCCTTCCTTTCCCTTCACTAATATCATTGTTACGTGTTCTTTGAAAATGAATGTTGCTTG
TGTGGGAACGAGTGATTTCGAACCAGTTTTGTGAAATACACATAAAATCTGGCATCGTGA
ATTCAACA
| SMART |
Laminin_G (IPR001791) - T[47-229] 1.9E-5 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[66-238] 1.58E-22 |
| Pfam |
Collagen (IPR008160) - T[331-381] 1.2E-8 - T[422-477] 5.5E-9 - T[473-531] 5.9E-7 - T[521-578] 2.4E-7 - T[581-636] 8.1E-8 - T[617-674] 1.1E-6 - T[827-885] 6.3E-7 - T[876-930] 1.7E-7 - T[926-984] 9.7E-9 - T[997-1055] 2.5E-9 - T[1153-1210] 2.1E-8 - T[1289-1344] 1.9E-7 - T[1406-1464] 1.6E-8 |
| Pfam |
Fib_collagen_C (IPR000885) - T[1494-1717] 2.2E-58 |
| SMART |
Fib_collagen_C (IPR000885) - T[1494-1718] 5.8E-66 |
| ProSiteProfiles |
Fib_collagen_C (IPR000885) - T[1495-1718] 63.725 |
| ProDom |
Fib_collagen_C (IPR000885) - T[1611-1718] 1.0E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| COBA2_HUMAN | 62.096 % | 474 | 2.87E-139 |
| COBA1_HUMAN | 54.71 % | 372 | 6.28E-105 |
| CO5A3_HUMAN | 55.951 % | 420 | 5.51E-121 |