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  1. Transcript 'Cisavi.CG.ENS81.R0.1...' > 
  2. Transcript 'Boleac.CG.SB_v3.S105...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S105.g00688.01.t

Possible name(s)

DES; GFAP; VIM

Gene model

Boleac.CG.SB_v3.S105.g00688

Location

S105 [2,493 / 6,739]

Sequences

Amino acid sequence

Length: 458

>Boleac.CG.SB_v3.S105.g00688.01.p
MSKSVVTERVVTKSYSSSLGSNTTPTKISGGRYSTIGRMSDFGYGTLSPSGGNNSYSYSY
ESSGGYGGGYGMGYGAGMGSGGLYISEKDLQELGGAGGAEFRTMRSGEKNELKQLNNRFA
SYIERVRFLEQQNLVLEAQLRQLSVKYESQLDDLYNSEVRRLKSFLDALKTDRAHIETEV
EQMQSDVGDLKSEYQTAVQDREELERELDNLRNNVDECTVSRVDLERKLISLREELDFDN
LAHVEIINELKSQLVTDHVRVQMDTHGPDLSDLLRDIRAQYDLAAKKNKEEAEAWYSAKL
NDLNASVSRDANRLKDSQTELSDFRNRVSGHTAQIESLRSNKDYLERQLADVEDRFNRDI
GGYQDQITELQAQLDKIKSEMADRLREYQELLAVKLGLDFEISTYQKLLEGEEFRLQAVP
PRLSTGEQLSLRKVVEEYEAAYKSAHSETSHGRSQQKI

Nucleotide sequence

Length: 2,093

>Boleac.CG.SB_v3.S105.g00688.01.t
CATGCGATGTAAATGTCATGAAACTGTTACCAAAATCANGGAAATACGTTTATTATGCGT
CGGTCTGATACCGCACTGACGTGTGCGTTTCAAATGTCGAATTGCGCCAGAGGCAAGCGA
ATGTTCGAGACATAGTGCTTACAGATTTTCGTGAAGAAGGTTTATCATCAACGCAGAAGG
TACTGCGGACGAACACATTGCACTCCACGTCGACTGTTTGGAGAAGATACCAAGAGTAAA
CGCATAACAACGACCATGTCAAAATCAGTGGTGACTGAACGTGTTGTCACGAAATCTTAT
TCAAGTAGTCTCGGTAGTAATACTACCCCTACAAAGATCTCAGGCGGAAGGTATTCTACA
ATCGGACGAATGTCTGACTTTGGATATGGAACCCTATCACCATCCGGTGGCAACAACTCC
TATTCGTATTCCTACGAAAGTAGCGGCGGATACGGTGGTGGATATGGAATGGGTTATGGA
GCAGGTATGGGGTCAGGTGGACTCTACATCAGTGAAAAGGATCTTCAAGAACTCGGCGGA
GCTGGTGGTGCCGAATTCAGAACCATGAGATCAGGGGAAAAGAACGAGCTGAAGCAATTG
AACAACCGATTTGCGTCCTACATTGAGCGTGTTCGGTTCTTGGAGCAACAGAATTTAGTC
TTGGAAGCGCAACTTCGTCAGCTTTCTGTCAAATATGAGTCTCAACTTGATGACTTGTAC
AATTCTGAAGTGAGAAGACTCAAGAGCTTTCTCGATGCATTGAAAACTGATCGGGCGCAT
ATTGAAACTGAGGTAGAGCAAATGCAATCTGATGTTGGAGATCTTAAATCAGAATACCAA
ACAGCCGTTCAAGATCGTGAGGAATTAGAGCGCGAGTTGGATAATTTGAGAAATAACGTN
GATGAATGCACCGTCAGCAGGGTTGATCTGGAAAGAAAATTGATTTCTCTGAGAGAGGAG
TTGGACTTTGACAATCTAGCACACGTTGAGATAATCAATGAGCTGAAATCNCAACTTGTC
ACTGACCATGTCCGTGTCCAAATGGACACCCACGGACCGGACCTGTCTGATCTACTTCGA
GACATCCGAGCGCAGTACGATCTTGCAGCTAAGAAAAACAAAGAGGAAGCAGAAGCGTGG
TACAGCGCCAAGCTCAACGACCTCAATGCATCCGTGTCGCGTGATGCAAACCGTCTCAAG
GACTCTCAAACCGAACTCAGCGATTTCAGAAATCGCGTCAGCGGACATACCGCGCAGATC
GAGTCTCTACGTTCAAACAAAGACTACCTGGAAAGGCAGTTGGCTGACGTCGAAGACAGG
TTCAACCGTGATATCGGTGGATATCAAGATCAAATTACCGAACTCCAAGCCCAACTTGAT
AAAATCAAGTCGGAAATGGCCGATCGACTCCGCGAGTATCAAGAACTTCTTGCTGTTAAG
CTTGGACTTGATTTCGAAATCAGCACCTACCAGAAACTCCTAGAGGGCGAAGAGTTTCGT
TTACAGGCAGTTCCACCACGATTATCAACCGGAGAGCAATTATCTCTTCGAAAAGTTGTG
GAAGAGTATGAAGCTGCTTATAAAAGCGCTCACTCGGAGACCAGTCACGGCAGGAGCCAG
CAAAAAATATAGAAGGCAACGAAGAGCTGCACTTACTTCGTAATCGAACAGCACATTACC
GTGCCGCAAATATATATCGCGTTACTGAAATTCATTCCAAAATTATCAAAGCAAGCATTA
GGCCTACTTGCTATGGCCCACCAATTTCTGAATTAGTGGGTGACTAATGCACTATCATTG
CACTTACACAGCGTTGGATGTTGCAACATATGTCACGCTGTGAAATCGTCCGCTACTGCT
ATATCTGAATTTTGTGTAACTGAAAATTTATCCATGGGTGAGATCGAAGTAAATGTCTGC
AGCGATATATGAAGAGATATAGTGGACTACTAGCCTAAGCCTGTTGGGCGGGTCGCACCG
GAGACTTGCGTGTTAAACTGGTATCCACGACTTCACTGGCAAGGGCGGAACTCTGGGATC
GCGTTACTAGCNAAAATGACGGCCACGCTGCCCGACGCCGATGGTGTGACGTA

InterProScan

PANTHER
IF (IPR001664) - T[53-445] 7.8E-98
SMART
IF (IPR001664) - T[107-415] 4.5E-108
Pfam
IF (IPR001664) - T[108-415] 1.1E-88
PRINTS
Keratin_I (IPR002957) - T[204-227] 6.7E-6 - T[356-382] 6.7E-6

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
VIME_HUMAN 37.799 % 271 2.6E-86
GFAP_HUMAN 40.267 % 257 3.47E-81
DESM_HUMAN 43.519 % 241 1.49E-74