- Transcript 'KH2012:KH.S765.1.v1....' >
- Transcript 'KH2012:KH.L170.28.v3...' >
- Transcript 'Boleac.CG.SB_v3.S10....'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S10.g00296.01.t
Possible name(s)
PUF60; U2AF2
Gene model
Location
S10 [27,246 / 32,008]
Amino acid sequence
Length: 451
>Boleac.CG.SB_v3.S10.g00296.01.p
MEATEFIKKETGGENGMYPSRRDEPDIKLEPGIKLEPDIKQNDGDADRKDHRRRNRSPRD
RERRRSRDRDRDRKRRSRSRDRSRRRPRSRSRERKRRSRSRSKERTMKKKKQYKYWDVAP
QGFEHLTPLQYKAMQAAGQIPLMATTPSLGAGGTPVPGTQMTRQVCPFYLFQARRLYVGN
IPFGVTEDAMMDFFNQQMKMSGLAQAPGNPVLAVQINLDKNFAFLEFRSVDETTQALAFD
GINFMGQSLKIRRPSDYKPLPGSSETPSVHLPGVVSTVVQDSLHKVFVGGLPNYLNEDQV
KELLTSFGPLRAFNLVKDSATSLSKGYAFCEYVDPTITDQSIAGLNGMQLGEKKLIVQRA
SVGAKTGVMNMLSTPVTLQASISLVVIVKSLEIPRPVPGTDVPGVGKIFVEFCNSTDSQN
ACKALSGRKFANRVVVTSYYDPDRYHRREFD
Nucleotide sequence
Length: 1,551
>Boleac.CG.SB_v3.S10.g00296.01.t
AATGTGCACTGCCGAAGCTGAACGAATACCGGTACGTTGAAGAAATAACATCTTATTGGT
GAGAGACAGAGATGGAAGCTACTGAATTTATCAAGAAAGAGACTGGTGGTGAAAATGGCA
TGTACCCATCACGACGAGATGAGCCTGATATCAAGCTTGAACCAGGTATCAAGCTTGAGC
CAGATATCAAGCAAAATGACGGTGATGCAGACCGAAAAGACCATAGAAGACGGAACAGGT
CACCGCGTGACCGAGAACGACGTAGGAGTCGGGACCGAGATCGAGACAGAAAGCGTCGGA
GTCGAAGCCGAGACAGGTCCAGGCGAAGGCCCCGATCACGATCAAGAGAGAGGAAAAGGC
GAAGTCGATCTCGGAGTAAAGAACGAACAATGAAGAAAAAGAAGCAATACAAATATTGGG
ATGTTGCACCTCAGGGATTTGAGCATCTAACGCCATTGCAATACAAGGCAATGCAGGCTG
CAGGTCAAATACCATTGATGGCGACGACTCCGAGCTTAGGAGCAGGAGGAACACCTGTTC
CAGGCACTCAAATGACAAGACAAGTTTGTCCATTCTACTTGTTTCAAGCCAGAAGATTGT
ATGTTGGAAATATTCCTTTCGGTGTAACAGAGGATGCAATGATGGATTTTTTCAATCAAC
AAATGAAAATGTCTGGCTTGGCTCAGGCTCCTGGAAATCCCGTTTTGGCCGTTCAGATTA
ACCTGGATAAGAATTTCGCGTTCTTGGAATTTCGATCAGTTGATGAAACCACCCAAGCTC
TTGCATTTGATGGAATCAATTTCATGGGGCAATCATTGAAAATACGTCGTCCTAGTGATT
ATAAGCCACTGCCTGGATCGTCGGAGACACCATCTGTTCATCTACCCGGGGTTGTGTCAA
CTGTCGTACAAGATTCCCTTCACAAGGTTTTTGTGGGGGGACTACCAAATTATCTCAACG
AGGACCAAGTCAAAGAACTTCTTACTTCATTTGGGCCGCTGAGAGCATTCAACCTTGTGA
AAGATAGTGCTACCTCCCTATCAAAAGGATATGCTTTCTGTGAATATGTCGATCCTACTA
TAACTGATCAGTCAATTGCTGGTTTGAATGGTATGCAACTTGGGGAAAAGAAACTGATTG
TTCAACGAGCCAGTGTTGGGGCAAAGACTGGTGTGATGAACATGCTCTCAACGCCTGTGA
CATTGCAGGCGAGTATATCTTTGGTTGTAATTGTCAAAAGCTTGGAGATTCCACGCCCCG
TTCCTGGTACCGATGTGCCTGGTGTCGGAAAAATTTTTGTGGAATTCTGCAACTCAACGG
ACTCGCAAAATGCATGCAAGGCGTTGTCTGGAAGGAAATTTGCCAATCGAGTTGTGGTGA
CCTCCTACTATGATCCAGACCGTTACCACCGTCGGGAGTTTGATTGAGATTCAAGAGCTG
AAAAGTTTGGAGATGAAGTCCGAAGAAATGAACTGAGACTGGATATTCCACTTGGCCCTT
TGAAAACACACTTTTTACTTCATGTGAATAAAACGATATTGTAAAAACTGG
| TIGRFAM |
U2AF_lg (IPR006529) - T[46-382] 6.8E-112 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[174-259] 3.2E-61 - T[260-263] 3.2E-61 - T[284-335] 3.2E-61 - T[336-357] 3.2E-61 - T[378-451] 1.0E-13 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[174-256] 13.891 - T[284-362] 15.05 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[174-258] 3.49E-19 - T[284-445] 3.74E-24 |
| SMART |
RRM_dom (IPR000504) - T[175-252] 1.2E-12 - T[285-358] 6.3E-16 |
| Pfam |
RRM_dom (IPR000504) - T[176-250] 1.8E-6 - T[286-355] 4.1E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| U2AF2_HUMAN | 61.758 % | 492 | 1.51E-172 |