- Transcript 'KH2012:KH.C11.232.v1...' >
- Transcript 'Harore.CG.MTP2014.S3...' >
- Clone 'ma339m24' >
- Transcript 'Boleac.CG.SB_v3.S110...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S1108.g01080.01.t
Possible name(s)
ACTA1; ACTA2; ACTC1
Gene model
Location
S1108 [103 / 2,832]
Amino acid sequence
Length: 378
>Boleac.CG.SB_v3.S1108.g01080.01.p
MSDGEEDQTAIVCDNGSGLVKSGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDE
AQSKRGILTLKYPIEHGIITNWDDMEKIWHHTMYNELRVAPEEHPTLLTEAPLNPKANRE
KMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVMDAGDGVSHNVPIYEGYALPHAIAR
LDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFEQEMATAASSTSLE
KSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANN
VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKXSVWIGGSILASLSTFQQMWI
TKQEYDEAGPSIVHRKCF
Nucleotide sequence
Length: 2,035
>Boleac.CG.SB_v3.S1108.g01080.01.t
ATGTCTGACGGCGAAGAAGATCAAACCGCTATCGTCTGCGATAACGGATCTGGCTTGGTC
AAATCTGGTTTTGCTGGAGACGATGCACCGCGTGCTGTATTTCCATCCATCGTTGGAAGG
CCGCGACATCAAGGCGTTATGGTCGGTATGGGCCAAAAGGACAGCTATGTCGGTGATGAA
GCTCAGAGCAAGCGGGGTATTTTGACCTTGAAGTATCCTATTGAGCACGGGATTATCACC
AACTGGGATGATATGGAGAAAATTTGGCACCACACCATGTATAACGAGCTTCGTGTTGCT
CCAGAAGAGCACCCTACACTACTCACTGAGGCTCCTTTAAATCCGAAGGCGAACAGAGAA
AAGATGACTCAAATCATGTTTGAAACATTCAACGTACCCGCCATGTATGTTGCTATTCAG
GCGGTTCTATCGTTGTATGCATCTGGTAGAACCACAGGGATTGTAATGGATGCTGGTGAT
GGTGTCTCACACAACGTGCCAATCTATGAAGGATACGCGCTCCCGCATGCTATAGCTCGC
TTAGATTTAGCAGGACGGGACCTNACGGATTACCTCATGAAGATCCTAACAGAAAGAGGT
TACTCTTTCGTTACTACTGCTGAACGTGAAATCGTTCGAGATATCAAGGAAAAATTGTGT
TACGTTGCTTTGGACTTCGAACAAGAGATGGCCACTGCAGCATCNTCCACATCGTTGGAA
AAGAGTTATGAACTTCCTGACGGGCAAGTGATCACAATTGGTAACGAACGATTTCGCTGC
CCGGAAACCCTCTTCCAACCGTCTTTCATTGGTATGGAGTCTGCTGGTATTCATGAAACC
ACCTACAACTCAATAATGAAATGCGATATCGACATTCGTAAAGATTTGTATGCCAATAAC
GTCTTATCCGGTGGAACTACTATGTACCCCGGTATTGCTGACCGTATGCAAAAGGAAATC
ACAGCACTCGCTCCAAGCACTATGAAAATCAAGATCATTGCGCCACCAGAGCGAAAGTAN
TCAGTTTGGATTGGAGGCTCCATTTTGGCATCTCTTTCTACTTTCCAGCAAATGTGGATC
ACCAAACAAGAATATGATGAAGCCGGACCATCCATCGTACATAGAAAATGCTTCTAAACC
CCGTTGTAATACGTGCATGCAGTATCGTTTGAACGTTTCAACCAACTTGCAATGTGTTCT
AAACCATATCCTATGCGGGAATATATGGATCGTGAAGTAATTTCAGCGTAGTTCATTCTT
ATATTGACTATCAGATGCGGCTGTGTCAACCGGCATCCCAATCAATTGTAACACGTTAGA
AAATTCTATGGTCGTTTTTTCACCCTCATTGAATAACTGATACTGTTGCACAATCGTACA
TCATAGCAAAGCGGTCTGAACCTTACCTGACACCCTTCACTTCCGGCCTGCCTTTATGCA
CAATAATCATAATACTGCGGGTGGTCTTGCCATATATATCCATTTGGCAACCATGGCATT
CGTATCTTGGCTGGTTAGTTATAGACGTCATTTCATTTCGCGTGTAATAGTTGCCTGTAG
CGAATATCGTCGGCCAGACCTAGCGTTCGATTGAAGATTATGATCAATAGCGTAAAGGTA
ACATTTTCGGGGCCAAGTTTCGGCAATGGCCTCACCGTTCGTATTTGAATTCGGTCGTTA
GCAGTGTTTCTATACTTCCCCCATGCTGTTCTTGGTGTTCGAATTGATACGCATATAAGC
AATTGGTCGATCGATCAATGGTTTAGATAGGGAAAAAGGTTTGCAAATACTTGGCTTTAC
GTATACTGCATAGTTTGCAGATTTGCACATCACACCGTGGCGTACTACATTTTATGCTAT
CGGTATGTTGTGATTACATACTTTATCTAGTCAAAGGCGCCAATTGGCTGTCGCAACTCC
CTGATCGCTGCATACTGTGGGCAAAGCGAGAAGCTGATTTGCATTTTAAATTTAAAGCAA
TGAAATCCAGTTTAATGTAGTATTAACACACTAAAACAAACTGGCCTACCCACAT
| PANTHER |
Actin (IPR004000) - T[5-377] 5.2E-264 |
| Pfam |
Actin (IPR004000) - T[7-378] 1.0E-146 |
| SMART |
Actin (IPR004000) - T[8-378] 4.7E-231 |
| PRINTS |
Actin (IPR004000) - T[29-38] 2.6E-57 - T[52-63] 2.6E-57 - T[64-86] 2.6E-57 - T[118-131] 2.6E-57 - T[143-162] 2.6E-57 - T[239-255] 2.6E-57 |
| ProSitePatterns |
Actin_CS (IPR004001) - T[56-66] . - T[359-367] . |
| ProSitePatterns |
Actin/actin-like_CS (IPR020902) - T[107-119] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ACTA_HUMAN | 96.257 % | 760 | 0 |
| ACTS_HUMAN | 96.257 % | 759 | 0 |
| ACTC_HUMAN | 96.257 % | 759 | 0 |