Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  2. Transcript 'Phmamm.CG.MTP2014.S1...' > 
  3. Transcript 'KH2012:KH.L152.46.v1...' > 
  4. Transcript 'Boleac.CG.SB_v3.S116...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S116.g01386.01.t

Possible name(s)

ACAN; BCAN; CLEC4M

Gene model

Boleac.CG.SB_v3.S116.g01386

Location

S116 [271,038 / 273,018]

Sequences

Amino acid sequence

Length: 277

>Boleac.CG.SB_v3.S116.g01386.01.p
MEQSTITVCLIILCWSVILVGGGTTSFQDIMDQYCRSSSEPIQVRSGKAGPKGPPGSRGP
IGRNGDRGPQGPPGPAGMPNMTAIEDIIQRKVDLGLQRVRLSLDEINQRMRHLTAKDSTI
NNLSNSVQMLRRLVLALNTEWELTDTYILYKKFTERVSYATAESRCREYRGRLASRILRD
ASVVRRLIHLGYLSTPLWVGFTDRIREGTWRWADGGTTNSLTTAWHPGEPNSYRGTDEDC
ASVGNKVSGSHTLLMNDEQCSNSNKYVCEIEVNRMET

Nucleotide sequence

Length: 929

>Boleac.CG.SB_v3.S116.g01386.01.t
AGAGCTTGTGGACGGGATATAGGCTACCAAATAGCAATGGAGCAATCCACAATAACAGTA
TGCCTAATAATTCTTTGTTGGAGCGTAATACTTGTTGGTGGTGGGACGACAAGTTTTCAA
GACATAATGGACCAATATTGTCGGTCTTCAAGTGAGCCGATTCAAGTTCGTTCTGGAAAG
GCAGGGCCGAAGGGTCCACCGGGGTCAAGAGGACCAATAGGGAGAAATGGAGATCGCGGA
CCACAGGGACCACCAGGTCCTGCTGGAATGCCGAACATGACAGCAATCGAGGATATAATT
CAGCGGAAAGTTGATCTAGGGCTTCAGCGCGTCCGCCTGTCATTGGACGAAATTAATCAG
CGAATGAGACATCTGACAGCAAAAGACTCTACAATCAACAATTTATCGAATTCAGTACAA
ATGCTACGGCGACTTGTCCTCGCCTTGAATACTGAATGGGAGCTCACGGACACCTACATA
CTTTACAAAAAATTTACGGAGAGAGTCAGTTACGCTACTGCCGAGTCGAGGTGCAGAGAA
TATAGAGGTCGGTTAGCGTCGCGGATATTGAGAGATGCCTCTGTTGTAAGACGTTTGATC
CATCTTGGATATTTATCGACGCCACTTTGGGTAGGATTCACTGATAGAATACGTGAAGGA
ACCTGGCGATGGGCAGATGGCGGTACCACCAACAGTCTTACAACAGCATGGCATCCGGGT
GAACCAAACAGTTACCGAGGTACAGACGAAGACTGCGCATCAGTAGGAAATAAAGTATCT
GGGAGCCACACGCTACTTATGAATGATGAGCAGTGTTCAAATAGCAACAAGTACGTTTGT
GAAATTGAGGTTAACAGGATGGAAACATGAATGAGCATTCGAAGACGCGTTAAAACGATC
GTTCTATTATGATCTTTTATTCAACAGCC

InterProScan

Gene3D
C-type_lectin-like/link_sf (IPR016186) - T[93-274] 4.8E-27
SMART
C-type_lectin-like (IPR001304) - T[137-269] 1.0E-11
SUPERFAMILY
CTDL_fold (IPR016187) - T[141-271] 2.97E-23
ProSiteProfiles
C-type_lectin-like (IPR001304) - T[150-269] 15.962
Pfam
C-type_lectin-like (IPR001304) - T[156-269] 1.1E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value