- Transcript 'KH2012:KH.C11.218.v1...' >
- Transcript 'Boleac.CG.SB_v3.S117...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S117.g01418.01.t
Possible name(s)
NLE1; POC1B; PREB
Gene model
Location
S117 [81,973 / 83,239]
Amino acid sequence
Length: 328
>Boleac.CG.SB_v3.S117.g01418.01.p
MASLCKLDYPIYACEALDTNHVIVGGGGGASKTGVPNAVDILKIEKIGKKLQADPSERLE
LGNNAAMNIAVLNRDGFVRAWNTSDFSKRFFSKGHKDDVTDVDISPDGKYAVSVSRDGTA
IIWNSETGMKEVDLHSKWNSQMTTRSYRFRSCRYGTIVENPKVYALFTAHSPIRPGRRSD
SKAAQGCLTKWARKRANEGTVTGPLRPVILQYTGREAISSMCISSDGVYLGVGFMEGTVS
IYISFSLQCAKRINNVHSIFVTGLSFLPSSDVSIAGTCDAALVSVSADNQCKLSKLSSRT
MFPIWFALLLIFISLAAAAYLLYEMGVI
Nucleotide sequence
Length: 987
>Boleac.CG.SB_v3.S117.g01418.01.t
ATGGCATCATTATGTAAGCTCGATTATCCGATTTATGCTTGTGAAGCGTTGGATACCAAT
CACGTGATTGTTGGAGGAGGTGGAGGGGCATCAAAAACAGGAGTCCCCAATGCAGTGGAT
ATTCTCAAAATTGAGAAAATCGGAAAAAAATTACAAGCCGACCCGAGCGAAAGATTGGAA
TTGGGAAATAATGCTGCGATGAATATTGCAGTTTTGAACCGTGATGGTTTTGTTCGTGCT
TGGAATACTTCTGATTTTTCTAAAAGATTTTTCTCAAAAGGCCACAAAGATGATGTAACA
GATGTTGATATTAGTCCGGATGGGAAATATGCCGTATCAGTTTCGCGAGACGGGACAGCA
ATAATATGGAATTCTGAGACCGGGATGAAAGAAGTCGACCTTCACTCAAAATGGAACTCG
CAAATGACGACACGAAGTTATCGTTTTCGATCATGTCGTTACGGAACTATCGTCGAAAAC
CCCAAAGTTTATGCTCTTTTCACCGCACACTCTCCAATCCGACCAGGGCGTCGATCGGAC
AGTAAAGCGGCTCAAGGTTGTCTAACGAAATGGGCTCGAAAACGAGCCAACGAAGGGACA
GTTACGGGTCCTTTGCGTCCTGTAATTCTGCAATACACCGGCCGCGAGGCGATATCTTCA
ATGTGCATTAGCTCCGATGGAGTATATTTAGGAGTTGGGTTCATGGAAGGCACTGTATCT
ATTTACATTTCGTTTAGTTTGCAATGTGCAAAGCGTATTAATAATGTCCATAGTATATTT
GTGACAGGCTTGTCATTTTTGCCTTCGTCGGATGTGTCAATCGCTGGAACATGCGATGCG
GCACTTGTCTCTGTGTCGGCAGACAACCAATGTAAATTATCAAAACTGTCAAGCCGGACG
ATGTTTCCAATATGGTTTGCATTGTTGTTAATTTTTATAAGCCTTGCAGCTGCGGCATAT
CTCTTATATGAGATGGGTGTTATATGA
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[3-301] 1.2E-64 |
| SUPERFAMILY |
Quinoprotein_ADH-like_supfam (IPR011047) - T[69-144] 2.98E-22 - T[204-298] 2.98E-22 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[69-133] 13.633 |
| SMART |
WD40_repeat (IPR001680) - T[83-124] 1.5E-7 - T[204-243] 55.0 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[92-133] 13.148 |
| Pfam |
WD40_repeat (IPR001680) - T[93-124] 1.8E-6 |
| ProSitePatterns |
WD40_repeat_CS (IPR019775) - T[111-125] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| PREB_HUMAN | 30.314 % | 140 | 1.83E-38 |