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TRANSCRIPT CARD

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  1. Transcript 'Moocci.CG.ELv1_2.S58...' > 
  2. Transcript 'Boschl.CG.Botznik201...' > 
  3. Transcript 'Boleac.CG.SB_v3.S118...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S118.g01457.01.t

Possible name(s)

RDH12; RDH13

Gene model

Boleac.CG.SB_v3.S118.g01457

Location

S118 [8,568 / 21,382]

Sequences

Amino acid sequence

Length: 413

>Boleac.CG.SB_v3.S118.g01457.01.p
MEKDTPNAKTVSNGMVCKDITLTGKTVMITGANTGIGYETAKDLAARGAKILMACRDMEK
CSQAISEILKEVPEANLKAVDLXLGSLDSVRQCAKTVNESEDRLDILINNAGIMACPKWK
TKDGFEMQLGVNHIGHFLLTNLLLDLIKILKEVPEANLKAVDLDLGSLDSVRQCAKTVNE
SEDRLDILINNAGIMACPKWKTKDGFEMQLGVNHIGHFLLTNLLLDLIKRSAPSRIVVVS
SSAHYRGTGVSCNSLHPGLVRTDLGRHFFNKNGVWNTIKYYVALPFVKAIFITPLQGAQT
SIYCAVGPENEIGTGNFFTNCAKKEESLAARNDADAEKLWQLSEEWTGLQSTPPAASLRR
IVGIFYQLDTKFLYVALIHGDLQYTDLPSSIFNRFTTTTNCEVFTFVGAFYAQ

Nucleotide sequence

Length: 1,412

>Boleac.CG.SB_v3.S118.g01457.01.t
CCTTCATCGACTTCCTTTCATACTTCACAGCAGCTGCTATTCACGGGTCATGGTTGAATT
ATTTTACAACANCAGATGAATAGAAATCAGCATTCGCCCATTCTATTGTAAGAATATTTC
AGAACGTATCGAACAAACACAGTGTAGGCCTACGAAGCAAAGTTCATGGGAATATGGAAA
AGGATACNCCAAACGCAAAAACNGTGTCGAATGGAATGGTATGCAAGGACATAACATTAA
CAGGAAAAACTGTGATGATAACAGGAGCCAATACAGGCATCGGTTATGAAACAGCGAAAG
ATTTGGCAGCACGTGGGGCAAAAATTCTAATGGCATGTAGGGACATGGAGAAATGTAGTC
AAGCAATTTCCGAGATTCTCAAAGAAGTACCGGAGGCAAATCTGAAAGCTGTNGACCTCG
ANCTTGGATCGTTGGATTCGGTACGTCAATGCGCAAAGACAGTCAACGAAAGCGAGGATA
GACTTGACATTTTAATAAATAATGCAGGTATTATGGCGTGTCCTAAATGGAAAACTAAGG
ATGGGTTTGAGATGCAACTGGGCGTGAATCATATTGGTCATTTTCTGTTGACAAACCTTC
TTTTGGATTTAATTAAGATTCTCAAAGAAGTACCGGAGGCAAATCTGAAAGCTGTTGACC
TCGACCTTGGATCGTTGGATTCGGTACGTCAATGCGCAAAGACAGTCAACGAAAGCGAGG
ATAGACTTGACATTTTAATAAATAATGCAGGTATTATGGCGTGTCCTAAATGGAAAACTA
AGGATGGGTTTGAGATGCAATTGGGCGTGAATCATATTGGTCATTTTCTGTTAACAAACC
TTCTTTTGGATTTAATTAAGAGAAGTGCTCCTAGTCGAATTGTGGTGGTTTCATCGAGCG
CTCATTACCGAGGTACAGGTGTATCTTGTAACAGTCTACATCCAGGACTCGTAAGAACGG
ATCTGGGGCGACATTTTTTCAACAAGAATGGTGTATGGAACACGATAAAATACTATGTTG
CACTCCCGTTCGTCAAAGCAATATTTATCACTCCTCTTCAAGGTGCTCAGACGAGCATAT
ACTGTGCGGTTGGCCCTGAAAATGAAATTGGAACAGGGAATTTTTTTACAAATTGCGCAA
AAAAAGAAGAATCTCTTGCTGCGCGCAACGATGCGGATGCAGAGAAACTTTGGCAGCTTA
GCGAAGAATGGACTGGATTGCAATCTACGCCGCCGGCAGCTTCACTCCGTCGAATCGTCG
GGATATTCTATCAACTTGATACGAAATTTTTATACGTTGCATTGATTCATGGTGATCTAC
AATATACCGATCTGCCATCTTCGATTTTTAATAGGTTCACCACTACCACCAACTGCGAAG
TTTTCACCTTTGTTGGGGCGTTTTACGCTCAG

InterProScan

SUPERFAMILY
NAD(P)-bd_dom_sf (IPR036291) - T[19-147] 5.48E-32 - T[146-321] 8.57E-30
Pfam
SDR_fam (IPR002347) - T[25-146] 7.4E-20 - T[149-243] 1.1E-11
PRINTS
SDR_fam (IPR002347) - T[26-43] 4.8E-13 - T[102-113] 4.8E-13 - T[248-265] 4.8E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RDH11_HUMAN 35.569 % 174 3.68E-51
RDH13_HUMAN 36.842 % 184 7.84E-55
RDH12_HUMAN 36.494 % 177 1.52E-52