Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,980

>Boleac.CG.SB_v3.S11.g00966.01.p
MATLTESTIPLKNVKRVQFGILSPDEIKRMSVTEGGIQYPEATEGGRPKLLGVMDPRQGV
IDRMSRCQTCAGNMTDCPGHFGHVELSKPVFHVGFLTKTIKVLRCVCFYCSKLLVDKSNP
KIRTIVGKTRGQARKRLLHVYDLCKGKNICEGGEEMDETFDMQTREDEEPKKAGHGGCGR
YQPKIKRVGLELVAEWKHVNEDSQEKKIPLTADRVYEIFKRVSDEESEILGMDPKHARPE
WMIITILPVPPLCVRPSVVMGGGSARSQDDLTHKMADIIKSNQQLKRNEQNGTAAHIIAE
DIKLLQFHVATLFDNELPGVPRALQKSGRPLKSIKQRLKAKEGRIRGNLMGKRVDFSART
VITPDPNLKIDTVSQNYYLPDSGDRIDLRYHPKPSDLHLQVGYKVERHIKDGDVIVFNRQ
PTLHKMSMMGHKVKVLPWSTFRMNLSVTTPYNADFDGDEMNMHIPQTMETRAEILELAMV
PRMIITPQSNRPVMGIVQDTLTAVRKMTKRDSFMDKAFFMNLLMYLENWDGHIPQPAILK
PKPLWTGKQLFSLIIPPGINCIRTHSTHPDGEDSGPYKHISPGDTKVVVENGILLSGIIC
KKSLGTSSGSLCHMVALEHTPDVCREFYGNIQTVVNHWLMIEGHSIGIGDTIADAQTYQD
IQSQIRKAKQEVIEVIEKAHKEDLQPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLS
EFNNFKAMVVAGSKGSKINISQVIAVVGQQNVEGKRIPFGFRHRTLPHFIKDDYGPESRG
FVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKAMESVMVRYDGTLRQ
SNNYMIQLRYGEDGLAGERVEFQNLATLKPSHKNFEKKFRMDYNNERQLRHGLTEELIRE
IQSDVGMQQALDSEFEKLRDDREVIRSIFPSGDSKVVLPVNLARLIWNAQKIFHIDLRKP
SSVNPLRVIEGVKELSKKLIIVSGEDKLSKEAQHNATLLFNVHLRSTLCTKRVAEEFRLS
AEAFEWILGEIETRFQQAQVHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGV
PRLKELINISKKPRTPSLTVFLVGQPTRDAQKCKDVLCRLEHATLRKVTANTAIYYDPDP
MDSVIEEDQEFVNVYYEMPDFDVSRISPWLLRIELDRKRMTDKKLTMEQIAEKISAGFGD
DLNCIFNDDNAEKLVLRIRIMNNESKTDEDTEEQVDKMEDDVFLRYIEANMLTDMTLQGI
PQIAKVYMHLPKEESKKRIVITKEGEFNAVQDWILETDGTALMRVLSERDIDPVRTTSND
ICEIFSVLGIEAVRKALEREINHVISFDGSYVNYRHLAMLCDVMTCKGHLMAITRHGINR
QETGALMRCSFEETVDILMEAASSAETDHMSGVSENIMLGQLIPGGTGCFQLMLDAEKCK
QAMEIPTNIGGVGGTGMFFGSMASPSSMSPSMTPWAGGATPAFGAFTPGYGSGMTPHAAA
FSPAQSDASGFSPGYSPAWSPAQSPGPASPASPYIPSPKHSALSPSYSPVSPAYEPGTPG
TPQSPKYSPGYTPTSPTYSPTSPRYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PSSPSYSPSSPKYSPSSPSYSPASPSYSPSSPKYSPASPSYSPASPDYSPSSPKYSPSSP
SYSPSSPSYSPASPSYSPASPKYSPSSPKYSPSSPGYSPTSPAYSPASPEYSPSSPTYSP
SSPKTADANPSYSPSIGYSPSSPAXSPSSPGYSPSSPNYGSVDHGVSPASPNYSPSSPSY
SPASPAYSPSSPNYAPSYSPASPQGDSYSPTSPSYNPSSPSYTPNTPGGMAYPPPDEDSD

Nucleotide sequence

Length: 6,083

>Boleac.CG.SB_v3.S11.g00966.01.t
GTTCTACTATAGATTTCATTCTAAAATTGAGTGTAACGGGTGAATTAGTCGACTGTGAAG
GTTTTGGTTCAAGTTTCGCCCGTTGCATTACTGGGCACCATTTGCTGCAGTCGGCGGGAA
ATTTGAATTGAGTATCTGCGATGGCAACCTTGACGGAATCGACTATTCCATTGAAGAATG
TCAAGCGGGTCCAGTTCGGCATCCTCAGTCCCGATGAAATTAAACGGATGTCTGTTACTG
AAGGGGGAATTCAATACCCAGAGGCAACAGAAGGAGGAAGACCAAAGCTTCTTGGTGTTA
TGGATCCCAGACAGGGTGTTATTGACAGAATGTCAAGGTGCCAAACCTGTGCTGGTAACA
TGACGGATTGTCCTGGGCATTTTGGACACGTTGAACTCTCAAAGCCGGTATTTCATGTTG
GTTTTCTGACAAAAACAATCAAGGTGTTGCGGTGTGTGTGCTTTTACTGTTCCAAACTGT
TGGTTGATAAGAGCAACCCAAAAATTCGTACCATTGTTGGTAAAACACGAGGACAAGCAA
GAAAAAGACTGTTACATGTGTATGACTTGTGCAAGGGTAAGAACATCTGCGAAGGAGGAG
AAGAAATGGACGAGACGTTTGATATGCAAACGCGAGAAGATGAGGAGCCAAAAAAGGCTG
GACACGGTGGCTGTGGAAGGTACCAACCAAAGATTAAACGGGTTGGTCTGGAGCTTGTCG
CAGAATGGAAACATGTCAACGAAGATTCCCAAGAAAAGAAAATCCCACTGACTGCCGACA
GAGTATACGAAATATTCAAGAGAGTAAGTGACGAAGAATCGGAAATCCTCGGAATGGATC
CTAAGCATGCTAGACCTGAATGGATGATAATCACAATACTTCCTGTTCCACCATTGTGTG
TACGTCCTTCTGTGGTTATGGGCGGTGGATCAGCCAGAAGCCAGGATGATTTGACACATA
AGATGGCGGATATCATCAAGTCCAACCAACAGCTTAAACGGAATGAACAAAATGGAACCG
CTGCTCATATTATTGCTGAAGATATTAAGTTATTGCAATTCCATGTGGCAACTTTGTTCG
ACAATGAATTACCAGGAGTGCCTCGAGCTCTGCAAAAATCTGGAAGGCCTTTGAAGTCTA
TTAAGCAGCGTTTGAAAGCTAAGGAAGGAAGGATTCGAGGAAACTTGATGGGAAAACGAG
TGGACTTTTCAGCAAGAACTGTCATCACACCAGATCCTAATCTCAAAATCGACACTGTTA
GTCAAAATTATTATTTACCAGATTCTGGTGATAGAATTGACTTGCGATATCATCCAAAGC
CATCAGATTTGCATTTACAAGTTGGATATAAGGTGGAAAGACATATCAAAGATGGCGATG
TCATTGTCTTCAACCGACAACCTACTCTTCATAAAATGTCAATGATGGGACACAAAGTAA
AGGTTCTTCCGTGGTCAACATTCAGAATGAACTTGTCTGTGACAACACCATACAATGCTG
ACTTTGACGGTGATGAAATGAACATGCATATTCCCCAGACCATGGAGACTCGAGCAGAAA
TTCTGGAACTTGCTATGGTACCTCGTATGATCATCACTCCACAAAGTAACAGACCCGTAA
TGGGTATTGTACAAGACACGCTGACTGCTGTGAGAAAAATGACCAAAAGAGATAGTTTCA
TGGATAAGGCATTTTTCATGAACTTGCTCATGTACCTTGAAAATTGGGATGGGCATATCC
CTCAACCAGCAATATTAAAACCAAAACCACTGTGGACAGGCAAACAACTTTTCTCTCTCA
TAATCCCTCCGGGGATCAACTGTATTCGAACACATAGCACTCACCCGGACGGTGAAGACT
CAGGGCCATACAAGCATATATCACCTGGTGACACAAAGGTGGTAGTGGAAAACGGCATTC
TGCTGAGTGGAATCATATGCAAAAAATCACTCGGTACATCATCTGGATCTCTCTGCCACA
TGGTGGCTCTAGAACACACACCGGATGTGTGTAGAGAGTTTTATGGAAACATCCAGACTG
TGGTCAATCATTGGTTGATGATTGAAGGTCATTCTATCGGTATCGGTGACACTATCGCTG
ATGCTCAAACTTATCAAGACATTCAAAGCCAAATCAGAAAAGCCAAACAAGAGGTCATTG
AGGTCATTGAAAAAGCACACAAAGAAGATTTGCAGCCTACTCCTGGTAACACTTTGAGGC
AGACCTTTGAAAACCAGGTCAACAGGATTTTAAATGACGCTCGTGACAAGACAGGCTCTT
CTGCTCAAAAAAGTTTGTCTGAATTCAATAACTTCAAAGCTATGGTGGTGGCTGGCTCCA
AAGGCTCCAAAATTAACATTTCTCAGGTTATTGCTGTGGTGGGGCAACAAAACGTGGAAG
GAAAGCGTATTCCATTTGGATTCCGACACAGAACTCTTCCACATTTTATAAAGGATGATT
ATGGCCCTGAATCTCGTGGGTTTGTGGAAAACTCTTATCTTGCTGGGTTGACCCCTACTG
AGTTTTTCTTTCATGCTATGGGAGGAAGAGAAGGGCTTATTGATACTGCAGTCAAGACTG
CTGAAACAGGCTACATCCAGCGACGTTTGATCAAAGCTATGGAGTCTGTCATGGTACGGT
ATGATGGAACCCTACGACAATCCAACAACTATATGATCCAGTTACGATACGGTGAAGATG
GTCTTGCTGGAGAAAGAGTCGAGTTTCAAAATCTGGCAACACTAAAACCAAGTCACAAAA
ATTTCGAAAAGAAATTTCGAATGGATTACAACAATGAAAGACAATTGCGGCATGGATTGA
CAGAGGAATTGATTCGTGAAATTCAGAGTGATGTTGGCATGCAACAAGCTCTTGATTCCG
AATTCGAAAAGCTCCGTGACGACAGAGAGGTCATTCGAAGCATTTTTCCCAGTGGTGACA
GCAAAGTTGTACTTCCGGTGAATTTGGCTCGACTGATATGGAACGCACAGAAGATTTTTC
ACATTGATTTGAGGAAGCCATCGTCTGTCAATCCACTGCGAGTAATAGAAGGTGTGAAGG
AACTGAGCAAAAAGCTTATTATTGTCAGTGGTGAAGACAAACTAAGCAAAGAAGCACAGC
ATAATGCAACTTTGCTGTTCAATGTTCACTTACGATCAACTTTATGCACAAAAAGAGTGG
CAGAGGAATTTCGACTCAGTGCAGAAGCATTTGAGTGGATACTCGGTGAAATTGAAACAC
GCTTCCAGCAAGCTCAAGTACATCCTGGAGAAATGGTAGGAGCACTTGCTGCCCAGTCAT
TAGGTGAGCCAGCTACTCAAATGACATTGAATACCTTTCATTACGCTGGTGTGTCAGCCA
AGAACGTTACACTCGGTGTACCTCGATTGAAAGAATTGATCAACATTTCTAAAAAACCAA
GAACTCCATCACTTACTGTCTTTTTGGTTGGACAACCAACCCGAGACGCACAGAAATGCA
AAGATGTGCTATGTCGTCTCGAGCATGCAACTCTAAGAAAAGTCACTGCCAATACTGCTA
TTTATTATGATCCTGACCCAATGGACAGTGTTATTGAAGAGGATCAGGAGTTCGTAAATG
TGTATTATGAAATGCCCGATTTTGATGTCAGTCGAATCTCTCCGTGGCTTCTCCGTATCG
AATTGGACAGAAAGAGAATGACAGATAAAAAATTGACGATGGAACAGATTGCGGAGAAGA
TCAGTGCCGGATTTGGTGATGACTTGAATTGCATTTTCAATGATGACAACGCAGAGAAAC
TTGTCCTTCGAATCAGAATTATGAACAATGAGTCAAAAACTGACGAAGACACTGAAGAAC
AGGTTGATAAAATGGAAGATGATGTATTTTTGAGATACATTGAAGCAAATATGCTCACAG
ACATGACACTACAAGGAATTCCACAGATTGCAAAGGTTTACATGCATCTGCCAAAAGAAG
AAAGCAAAAAGCGAATTGTGATTACCAAAGAAGGTGAATTCAATGCAGTGCAAGACTGGA
TTCTGGAGACCGATGGTACCGCTTTAATGCGTGTACTCTCTGAACGGGATATTGACCCAG
TCAGAACAACATCCAATGATATTTGCGAGATATTCTCGGTACTTGGAATTGAGGCTGTCA
GAAAAGCGTTGGAAAGAGAAATCAATCATGTTATTTCTTTTGATGGTTCATATGTAAATT
ATCGGCATTTGGCAATGTTGTGTGATGTCATGACATGCAAGGGTCACTTGATGGCTATCA
CTCGACATGGTATCAATAGACAAGAAACCGGTGCTCTTATGAGGTGTTCATTCGAGGAGA
CTGTTGATATTCTCATGGAGGCTGCCTCGTCTGCTGAAACTGATCACATGAGCGGCGTGT
CTGAAAATATTATGCTGGGTCAATTGATTCCGGGAGGTACTGGGTGCTTCCAACTGATGT
TAGATGCAGAAAAGTGCAAACAAGCTATGGAGATCCCTACAAACATCGGTGGTGTCGGAG
GCACTGGAATGTTCTTTGGATCAATGGCATCTCCGAGCTCCATGTCACCAAGTATGACTC
CTTGGGCAGGTGGGGCTACTCCTGCGTTTGGTGCTTTTACTCCTGGCTATGGCTCTGGTA
TGACTCCTCATGCTGCTGCTTTCTCGCCGGCTCAATCTGATGCATCTGGATTTTCACCTG
GATACAGTCCAGCATGGAGTCCTGCTCAATCACCAGGACCAGCTAGTCCTGCTTCGCCGT
ATATTCCATCACCGAAGCATTCAGCTTTGTCCCCAAGTTATTCTCCAGTGTCACCGGCCT
ATGAGCCAGGAACTCCAGGAACACCGCAAAGTCCGAAATACAGTCCAGGTTACACACCAA
CAAGTCCAACGTACTCTCCAACATCGCCGAGATACTCACCCACGAGTCCTGGTTACAGCC
CAACTTCTCCATCATATTCTCCCACAAGTCCGTCGTACTCGCCTACATCGCCCAGCTACA
GTCCGACTTCACCATCGTATTCTCCTACGAGTCCATCATACTCTCCGACAAGCCCCAGTT
ACAGTCCGACATCACCATCGTATTCACCTACGAGTCCGTCGTACTCTCCAACCTCGCCAA
GTTACAGCCCAACGTCGCCGAGTTACAGCCCGACGTCACCAAGTTATTCCCCAACATCGC
CATCATATTCTCCGACGAGTCCGAGCTACAGCCCGACATCTCCATCTTATTCGCCTACAA
GTCCATCTTATTCACCGACATCTCCGAGTTACAGCCCTACCTCTCCGAGCTATTCACCAA
CGTCGCCTTCGTATTCACCTACTTCGCCAAGCTACAGTCCAACCAGCCCGTCGTACTCGC
CGACGAGTCCATCTTATTCACCTTCCAGTCCGAGCTATTCACCATCCTCGCCAAAATATT
CGCCTTCATCTCCTTCGTACAGTCCTGCTTCACCAAGCTATTCTCCATCCAGTCCCAAGT
ATTCACCTGCAAGTCCATCGTACAGCCCGGCGTCTCCGGACTACAGTCCATCGAGCCCAA
AGTATTCGCCATCGAGTCCATCGTATTCACCATCTTCTCCATCATACTCACCAGCGTCAC
CATCGTACAGTCCGGCTTCGCCAAAATATTCACCCTCAAGTCCGAAATATTCGCCATCCA
GTCCGGGGTACTCACCAACAAGTCCTGCATATTCTCCAGCAAGTCCAGAGTACTCGCCGT
CATCTCCGACATATTCGCCATCCAGCCCGAAGACCGCAGATGCGAACCCATCATACAGCC
CGTCAATTGGCTACTCACCATCAAGTCCAGCATANTCTCCGTCTAGTCCTGGGTATTCTC
CTTCAAGTCCAAATTATGGGTCTGTTGATCATGGTGTCTCACCAGCGTCTCCTAACTACA
GTCCATCAAGTCCGTCATACAGCCCAGCTAGTCCGGCATACTCGCCGTCAAGTCCAAACT
ATGCACCAAGTTATTCGCCGGCTAGTCCGCAAGGAGATTCGTATTCCCCCACAAGTCCAA
GTTACAATCCAAGCTCACCATCTTACACCCCGAATACTCCTGGTGGAATGGCTTACCCAC
CACCAGACGAGGACTCTGACTGA

InterProScan

Pfam	RNA_pol_Rpb1_1 (IPR007080) - T[12-349] 3.1E-105
SMART	RNA_pol_N (IPR006592) - T[240-508] 1.2E-156
Pfam	RNA_pol_asu (IPR000722) - T[351-374] 1.8E-5 - T[379-480] 4.0E-43
Pfam	RNA_pol_Rpb1_3 (IPR007066) - T[484-651] 2.9E-49
Gene3D	Rpb1_funnel_sf (IPR038120) - T[646-791] 3.6E-54
Pfam	RNA_pol_Rpb1_4 (IPR007083) - T[677-782] 7.8E-37
Pfam	RNA_pol_Rpb1_5 (IPR007081) - T[789-1385] 3.0E-100
Pfam	RNA_pol_Rpb1_6 (IPR007075) - T[855-1038] 1.1E-68
Gene3D	RNA_pol_Rpb1_7_sf (IPR038593) - T[1123-1259] 1.7E-56
Pfam	RNA_pol_Rpb1_7 (IPR007073) - T[1123-1258] 2.3E-55
Pfam	RNA_pol_II_repeat_euk (IPR000684) - T[1509-1522] 13.0 - T[1548-1560] 2.2 - T[1564-1578] 6.1 - T[1579-1592] 0.011 - T[1593-1606] 1.8 - T[1607-1620] 1.8 - T[1621-1634] 1.8 - T[1635-1648] 1.8 - T[1649-1662] 1.8 - T[1663-1676] 1.8 - T[1677-1690] 1.8 - T[1691-1704] 1.8 - T[1705-1718] 1.8 - T[1719-1732] 1.8 - T[1761-1774] 1.6 - T[1775-1788] 0.83 - T[1817-1830] 0.045 - T[1831-1844] 0.19 - T[1845-1858] 0.17 - T[1886-1899] 8.0 - T[1907-1920] 3.5 - T[1921-1934] 0.53 - T[1939-1955] 2.0
ProSitePatterns	RNA_pol_II_repeat_euk (IPR000684) - T[1599-1605] . - T[1606-1612] . - T[1613-1619] . - T[1620-1626] . - T[1634-1640] . - T[1641-1647] . - T[1648-1654] . - T[1655-1661] . - T[1669-1675] . - T[1676-1682] . - T[1683-1689] . - T[1690-1696] . - T[1711-1717] . - T[1718-1724] . - T[1725-1731] . - T[1732-1738] . - T[1753-1759] . - T[1767-1773] . - T[1795-1801] . - T[1802-1808] . - T[1837-1843] . - T[1851-1857] . - T[1858-1864] . - T[1913-1919] . - T[1927-1933] . - T[1948-1954] .