- Transcript 'Boleac.CG.SB_v3.S122...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S122.g01768.01.t
Possible name(s)
IRF2; IRF5; IRF8
Gene model
Location
S122 [123,323 / 124,865]
Amino acid sequence
Length: 513
>Boleac.CG.SB_v3.S122.g01768.01.p
MARLEEADEDFKLPLRPWLEKQINSGKFKGLEWEQCDGETKMFRLPWVKKNLPDWEEYYK
IFRAWADHRGRGEADGLDDSKLKSNFRCALNKSADFVEVSSRSQLQRQTGNYKMYRILTP
REVRERKKSRSKGKPKHEHNLNDDEVKTIDKHGLDVLDSLGSSSSFGPCSAMEIDPSLNF
PTIDESVLTPTSSYLMPTSELARDPITTIRPPDMPDFSPGLAISPAGPVVPATWPREVSM
DEEPFPAPNLSSSNEDDNVSFELDPSSTTALISEQLRNAGVDLTRLCECQVIVTYNGEKV
LERVVEDLHKGYRIFYGNKDEQLMRLLQMRNRPEERLADFQLQGIQLPTLVQPNHTMSAI
LNKTDLGVVIRYDPQTLRLCAKRLCQSQVFFFDPHDPSASEPIKLEREQIVELFSYEKYV
LQYIHQVVHEENLVPPEADIVLSVGIKPKSKLNLPVMKGLKIELIPYALDYFAKNNSQPG
SSISLCFSNPISLETLLRTIKQKSSPTKDSVNA
Nucleotide sequence
Length: 1,542
>Boleac.CG.SB_v3.S122.g01768.01.t
ATGGCTCGTCTGGAGGAGGCTGATGAAGATTTTAAGCTGCCGCTGCGGCCGTGGTTGGAA
AAACAAATAAACAGTGGCAAGTTTAAAGGCTTAGAATGGGAGCAATGCGACGGAGAAACG
AAGATGTTTCGATTGCCGTGGGTGAAAAAGAATTTGCCGGATTGGGAGGAATATTACAAG
ATATTTCGCGCATGGGCGGATCACAGGGGACGAGGTGAAGCCGATGGATTAGACGACTCC
AAACTCAAGTCAAATTTTCGGTGTGCCTTGAATAAATCAGCAGATTTTGTAGAAGTATCG
AGTCGATCTCAACTCCAACGACAAACTGGCAATTACAAGATGTACAGGATTTTGACTCCG
AGGGAAGTTCGCGAGCGCAAGAAAAGTCGAAGCAAAGGGAAACCTAAGCACGAACATAAC
TTGAACGACGATGAAGTTAAAACGATTGACAAACACGGCTTAGATGTGTTGGATAGTCTT
GGCTCTTCGTCATCATTCGGTCCATGTTCTGCCATGGAAATCGACCCCTCATTGAATTTC
CCAACAATTGACGAATCCGTCTTGACACCTACCTCATCCTATCTAATGCCCACAAGTGAA
TTGGCGCGAGACCCAATAACAACTATCCGACCACCTGATATGCCTGATTTTAGCCCAGGT
CTTGCTATATCTCCAGCTGGCCCTGTGGTGCCGGCAACGTGGCCTCGAGAAGTATCGATG
GATGAGGAGCCCTTTCCAGCTCCTAACCTATCAAGTAGCAATGAAGATGATAACGTCAGT
TTTGAGTTAGATCCATCAAGTACAACTGCATTAATCAGCGAGCAGTTGAGAAATGCTGGG
GTTGATCTAACTCGGTTATGCGAATGTCAGGTCATTGTCACTTACAACGGAGAAAAAGTT
TTGGAAAGGGTGGTTGAAGATCTACACAAAGGGTACCGAATTTTTTACGGCAATAAAGAC
GAACAACTAATGCGTTTATTGCAGATGCGCAACAGACCAGAGGAAAGACTTGCCGACTTC
CAATTGCAAGGCATCCAACTTCCAACTCTAGTACAACCCAACCACACGATGTCCGCCATT
TTGAATAAAACAGATTTGGGAGTCGTGATACGCTACGACCCTCAAACGCTTCGTCTATGT
GCAAAAAGACTTTGCCAAAGCCAAGTGTTTTTCTTCGACCCTCACGACCCTTCAGCATCT
GAACCGATTAAACTCGAACGGGAACAAATAGTTGAACTGTTTTCTTATGAGAAATACGTT
CTTCAATATATTCACCAAGTTGTACATGAGGAGAATTTAGTGCCTCCAGAAGCTGACATT
GTGTTATCTGTTGGGATCAAACCAAAATCAAAACTAAACCTTCCAGTAATGAAAGGATTG
AAAATTGAACTGATACCATATGCTTTGGATTATTTTGCAAAGAACAACAGCCAACCAGGT
TCCAGCATTTCTCTGTGTTTCAGCAATCCAATATCATTAGAAACATTGCTGAGAACCATC
AAGCAGAAATCATCTCCTACCAAAGATTCTGTCAATGCCTAA
| PANTHER |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[5-140] 3.4E-51 - T[281-453] 3.4E-51 |
| SMART |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[8-120] 6.3E-21 |
| Gene3D |
WH-like_DNA-bd_sf (IPR036388) - T[11-119] 1.6E-27 |
| ProSiteProfiles |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[12-119] 33.074 |
| SUPERFAMILY |
WH_DNA-bd_sf (IPR036390) - T[12-119] 3.17E-26 |
| PRINTS |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[14-33] 9.9E-11 - T[58-75] 9.9E-11 - T[79-101] 9.9E-11 |
| Pfam |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[15-117] 2.2E-26 |
| CDD |
Interferon_reg_fact_DNA-bd_dom (IPR001346) - T[15-118] 1.97631E-27 |
| Gene3D |
SMAD-like_dom_sf (IPR017855) - T[277-463] 3.3E-25 |
| SMART |
Interferon_reg_factor-3 (IPR019471) - T[286-474] 5.4E-15 |
| Pfam |
Interferon_reg_factor-3 (IPR019471) - T[287-450] 2.8E-23 |
| SUPERFAMILY |
SMAD_FHA_dom_sf (IPR008984) - T[290-445] 3.73E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| IRF2_HUMAN | 36.937 % | 80.1 | 2.32E-16 |
| IRF8_HUMAN | 43.243 % | 79.3 | 6.92E-16 |
| IRF5_HUMAN | 25.1 % | 85.9 | 7.32E-18 |