- Clone 'cibd043f05' >
- Clone 'cien224903' >
- Clone 'AHC0AAA59YP01' >
- Clone 'cien48829' >
- Transcript 'Boleac.CG.SB_v3.S122...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S122.g01775.01.t
Possible name(s)
CACNA1C; CACNA1D; CACNA1S
Gene model
Location
S122 [214,911 / 273,694]
Amino acid sequence
Length: 2,234
>Boleac.CG.SB_v3.S122.g01775.01.p
MRFSSSSLGHSISEAKAIVIFTKCNSDGYYSRTRISSLIPYAKVAISSTRSKQRSYKMEP
ESHSGKVVVSVTQRSDHGSLDAQDITTKGLQNDKGARGGLDKKNADIQDSGDSEKQRLLQ
DPESEGQSHAVTTEQNSAGGGVNWATVLAAAKEKHVAMHGTARKRKPVSDANTGRAPVAL
CFGVKHPLRRACIKIVDSKGFEIAILLTIFANCFALSWYVPFPSDDTNTDNRILEIVEYG
FLAVFTVEAILKTIAYGFVLHPNAYLRNVWNVIDFLIVVIGLMSLVLEKVSVGSTDKVRS
LRAFRVLRPLRLVSGVPSLQVVLNAILRAMVPLLHIALLVIFVIIIYAVVGLELFRGKLH
KTCYKFDDGHYVFASDEPAPCGDANSTGRKCPFGSQCLELEQWDGPNMGIVNFDNFGFAI
ITVFQCITMEGWTDVLYMMNDAIGPELPWAYFVSLIIIGSFFVMNLILGVLSGEFSKERE
KANSRGEFQKLREKQQTDEDMRGYLDWITQAEDLDPVVFTATGGDEDGQQPKHSVRRRCR
DAVKSKAFYWTVIALVFLNTLSLATEHHNQPDWLGLVQDISNKVFLGLFTVEMVAKMYSL
GMQQYFGLSFNRFDCFVVLGGILELILTSSKVMEPLGISVLRCVRLLKIFKVTRYWQSLS
NLVASLLNSIRSIASLLVLLSLFIVIFALLGMQLFGGRFVNISTDEKIRSNFDSFWPALL
TVFQILTGEDWNVVMYNGIAAYGGAHSIGVLSSIYFIILFVVGNYILLNVFLAIAVDNLA
DAESLGAAQKEKEEEKKRQKKARLNKLRKLFKKKEQSSIDANENPKTDTLSRVSEEVPYE
TDPVVRIEITQASDTNSDKHLPEMSDSENEEEQHVGPRPRRLSARELKTKTEPMPNATSF
FIFTKTNPLRKLCHAIVNYQLFNNFTLACIILSSLALACEDPVDPTSSRNIVLTYVDYVF
TGIFSVEILLKMIAYGAVLHKGSFCRSYFNLLDLLVVVVSLISIFSKLVNNGQSDTLSAI
KILRVFRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNILIITTLLQFMFACIGVQLFKGR
FWSCNDHSKLTEDECVGRYQKFSSIESDDVEIVPREWTNSEFNYDNVMNAMLTLFVVATF
EGWPGLLYKSIDSWKEDQGPKYNARRGVALFYVIYIIVIAFFMMNIFVGFVIVTFQEQGE
QEYKNCELDKNQRNCLEYALTAKPIKRYVPSNENQRKVWAIVTSTYFEYFMLFLILLNTV
CLAVQHYHQPAKLENVLNHMNYIFTALFTLEMIVKLVAYKPTGYIKDPWNVFDSLIVIGS
LVDILYTEFHAGGEKSFSINFFRLFRVLRLVKLLSRGEGIRTLLWTFIKSFQALPYVALL
IVMLFFIYAVIGMQIFGKIKRVEDGQINFNNNFQTFLAAVLLLFRCATGEAWQEVMLACR
AGRECDDRSDWNTTGAGSDAKFQCGSDFAYTYFLSFYMLCAFLIINLFVAVIMDNFDYLT
RDWSILGLHHLDEFARVWSEFDASASGRIKHMNVVKLLRQIQPPLGFGKLCPQRMACRKL
VTMNMPLNMDGTVMFNATLFALVRTSLKIKTEGXIDQANEELRAVIKKIWKRTPDAVLNQ
VVPPAGNDDITVGKFYATYLIQDYFRRFRKRQAKQLRKSSGSPLGKKSNVYTLQAGIRMV
QECGPELKRTISGTLLANGADESDRKSVVSENEPEHRRRHSIFGLVSKEQPNADNNVAIA
SNRPLKVENEITEKRDHHKHDHYVEQNPLTNTLTPRHPVDKPSKPNSANSVHTANNNHTD
TIFVVPKKEPESNIKPXENYDSAGSTQNVGKSPLNEIAREIQTSPSHXTNNNSMISEERR
LPITKRKYLSESKRRTVSLEEXDEKKISRQNLLVQPFNSLGRNTNRKTELDKSPLLKSES
RPCYCGKSRTFKKGTDNPTPDTNNLRQKTSTTGDLRTEQDEFFEMEDMTQKRPVLVHQQS
DSFNFEEVSSGSSSSFSDDYYRSDMGAEFDDEYPSMRTLDTADNVRSSSALKNNRKFNLL
ASNSPTQRKDPSARRKLPPTPNAPKRTFLVPAAVHRNATKQEDRDLELGNRQSEQTPLLT
SRTDSTFKRFPALRNCDKIAGSLEDEDYEVSEMRDPQRNDVILCDVKNSSNQHETGVQIY
QNDRKQHMVDNRHRPACSSSNKFRRQQRIGDVELDIDSTPLLSTFYEKPNDPTLQISYDE
ETSLADEMIVPRVE
Nucleotide sequence
Length: 7,900
>Boleac.CG.SB_v3.S122.g01775.01.t
ATGCGGTTCTCGAGCAGCAGCTTAGGGCATTCGATCTCTGAAGCAAAAGCGATTGTTATC
TTTACTAAGTGCAATTCGGATGGCTATTATTCAAGAACAAGAATTTCTTCGCTAATTCCG
TATGCCAAAGTGGCGATTTCGTCCACTCGCTCAAAGCAACGTTCCTATAAAATGGAGCCT
GAGAGTCATAGCGGAAAGGTGGTTGTATCAGTTACTCAAAGAAGCGACCACGGCAGTCTT
GACGCGCAAGATATCACAACAAAAGGCTTGCAAAATGACAAAGGCGCCCGGGGAGGCTTG
GATAAAAAGAACGCAGATATCCAAGACAGTGGAGACTCAGAAAAGCAGAGATTACTTCAA
GATCCTGAGAGTGAAGGGCAAAGCCACGCGGTAACTACAGAACAAAATTCTGCCGGTGGC
GGCGTTAATTGGGCGACAGTACTAGCCGCTGCGAAAGAAAAGCACGTTGCCATGCATGGG
ACTGCCCGAAAACGAAAGCCAGTCTCCGATGCTAACACAGGACGTGCTCCTGTCGCGTTG
TGTTTCGGAGTAAAACATCCGCTAAGAAGAGCCTGTATCAAGATTGTTGACTCCAAGGGT
TTCGAGATCGCCATTCTTTTAACTATTTTCGCAAACTGCTTCGCGCTCTCATGGTACGTT
CCATTTCCAAGCGATGATACCAATACGGACAATCGAATATTGGAAATCGTCGAGTATGGC
TTTCTAGCAGTATTCACCGTTGAAGCAATCTTGAAAACTATCGCTTACGGATTTGTTTTG
CACCCCAACGCATATTTACGGAACGTATGGAACGTCATCGACTTTCTAATAGTTGTTATT
GGCTTGATGAGCCTCGTTCTAGAAAAAGTCAGCGTCGGAAGCACAGACAAAGTTCGATCC
TTACGTGCCTTTAGAGTTCTCAGACCTTTGCGACTCGTTTCCGGTGTCCCAAGTTTGCAA
GTGGTTTTGAATGCGATTCTTCGAGCCATGGTTCCACTTCTTCACATTGCTTTACTTGTC
ATATTCGTCATCATCATATACGCGGTCGTTGGACTCGAGCTCTTTCGCGGCAAATTACAT
AAGACTTGCTACAAATTCGATGACGGCCACTATGTCTTCGCAAGCGATGAGCCTGCCCCG
TGCGGTGATGCCAACTCTACTGGAAGAAAATGTCCATTCGGATCGCAATGTCTGGAATTG
GAGCAGTGGGACGGTCCCAACATGGGAATAGTGAATTTTGATAATTTCGGCTTTGCTATA
ATAACTGTGTTTCAATGTATCACTATGGAAGGATGGACCGACGTGCTGTATATGATGAAC
GACGCTATTGGTCCTGAACTGCCGTGGGCGTACTTTGTTTCTCTTATTATAATCGGATCA
TTTTTTGTCATGAACCTCATCCTTGGTGTATTGAGTGGTGAATTTTCCAAAGAAAGAGAA
AAGGCGAATTCTCGTGGCGAATTTCAAAAGTTGCGGGAAAAACAACAGACTGACGAAGAT
ATGCGGGGTTATCTGGATTGGATTACCCAAGCGGAAGATTTGGATCCTGTTGTTTTCACC
GCAACGGGAGGGGATGAAGACGGCCAACAACCGAAGCACAGCGTACGACGACGCTGTAGG
GACGCAGTGAAATCAAAGGCATTCTATTGGACAGTTATTGCACTTGTATTTCTCAACACA
CTCTCACTAGCAACAGAACATCACAATCAACCAGATTGGCTCGGGCTCGTTCAAGATATA
TCCAACAAAGTCTTCCTCGGTCTTTTTACTGTNGAGATGGTGGCAAAAATGTACTCACTT
GGAATGCAACAATATTTCGGATTATCATTTAATCGCTTCGACTGTTTTGTGGTGCTGGGT
GGAATTCTGGAACTCATACTCACGAGTTCGAAGGTGATGGAGCCGCTCGGAATTTCCGTC
CTTCGTTGTGTGCGTCTTCTCAAAATCTTTAAAGTGACAAGGTATTGGCAGTCACTGAGT
AATCTTGTCGCTTCGCTTCTCAATTCTATTCGTTCGATTGCAAGTTTGCTTGTTCTTCTA
TCTCTATTTATTGTTATATTCGCGCTACTTGGGATGCAACTTTTTGGAGGAAGATTTGTT
AACATTTCTACTGATGAAAAAATACGATCTAATTTCGATTCATTCTGGCCAGCTTTGCTC
ACAGTATTTCAGATCCTGACCGGAGAAGATTGGAATGTCGTTATGTATAACGGCATCGCA
GCATACGGAGGCGCCCACTCTATTGGGGTTTTGAGTTCTATTTATTTCATTATACTTTTT
GTGGTGGGTAACTACATCTTACTCAACGTGTTCTTGGCTATCGCCGTCGACAATCTTGCG
GATGCAGAGAGTTTGGGTGCCGCTCAAAAAGAGAAAGAGGAAGAAAAGAAGAGACAGAAA
AAAGCTAGATTAAATAAATTAAGGAAACTTTTCAAGAAGAAGGAACAATCAAGCATCGAT
GCAAATGAGAATCCTAAAACGGACACTTTGAGTCGAGTTTCCGAAGAAGTTCCATATGAA
ACTGACCCGGTTGTAAGGATCGAAATCACGCAAGCCTCAGATACGAATTCCGATAAACAT
TTACCAGAAATGAGTGATAGCGAGAATGAAGAGGAACAACATGTTGGACCGAGGCCGAGA
AGGTTATCTGCACGGGAGTTGAAGACGAAGACGGAACCGATGCCTAACGCTACCTCTTTC
TTTATCTTCACAAAGACTAATCCATTAAGAAAGCTTTGTCATGCCATCGTCAACTATCAA
CTGTTCAACAATTTTACTTTAGCATGTATTATATTGAGTAGTCTTGCCCTTGCTTGCGAA
GATCCCGTAGATCCAACTTCAAGCCGTAATATTGTTTTAACATACGTCGATTATGTTTTT
ACTGGGATATTCTCCGTTGAGATTTTGTTGAAGATGATTGCGTATGGAGCTGTTTTACAT
AAAGGATCTTTCTGTCGTAGTTATTTCAACTTGTTGGATCTTCTTGTCGTGGTCGTTTCT
CTTATATCAATCTTCAGCAAACTTGTCAACAACGGGCAATCTGATACGCTATCTGCTATC
AAAATTCTTCGTGTGTTTCGTGTTTTACGTCCTTTAAGAGCTATAAATCGAGCAAAAGGA
TTGAAACATGTTGTGCAATGCGTATTTGTGGCAATAAAAACCATCGGAAATATTCTTATC
ATTACAACTCTACTCCAGTTTATGTTCGCTTGCATCGGAGTTCAACTGTTTAAAGGCCGT
TTCTGGAGCTGTAATGATCATTCGAAATTGACTGAAGACGAATGCGTAGGAAGATATCAA
AAATTCTCAAGCATAGAAAGCGATGACGTGGAAATAGTCCCCAGAGAATGGACGAATAGT
GAATTCAACTACGACAACGTCATGAACGCGATGTTGACATTATTCGTGGTTGCAACATTT
GAAGGATGGCCAGGACTGCTGTACAAATCCATTGACTCTTGGAAAGAAGACCAAGGTCCG
AAATATAACGCCCGTCGCGGAGTTGCGTTATTTTACGTTATTTATATCATCGTGATTGCG
TTTTTTATGATGAATATTTTCGTTGGTTTTGTCATTGTCACTTTTCAAGAGCAAGGAGAA
CAAGAGTACAAAAATTGCGAGTTGGACAAAAATCAGCGTAACTGTTTGGAATATGCCCTT
ACTGCCAAACCTATCAAGAGATACGTACCGAGCAACGAAAACCAACGCAAAGTGTGGGCC
ATTGTGACGTCGACGTATTTTGAGTATTTCATGCTCTTTCTTATTTTGCTCAACACGGTG
TGTTTGGCCGTGCAGCACTATCATCAGCCGGCGAAGTTAGAAAACGTACTCAATCATATG
AACTATATCTTTACTGCTTTGTTCACACTTGAAATGATCGTCAAACTTGTGGCTTACAAA
CCAACGGGATATATCAAAGACCCTTGGAATGTATTTGACTCACTCATTGTTATTGGAAGC
CTTGTCGATATTTTGTACACTGAGTTTCATGCCGGTGGAGAAAAGTCTTTCAGCATAAAT
TTCTTCCGATTATTCCGTGTTTTGCGTCTCGTGAAGTTATTGAGTCGTGGAGAAGGAATT
CGGACTTTATTGTGGACTTTTATCAAGTCATTCCAAGCTCTGCCTTACGTCGCTTTGCTC
ATCGTAATGCTTTTCTTCATTTACGCCGTGATAGGAATGCAAATATTTGGAAAGATCAAA
CGTGTAGAAGACGGACAGATCAATTTTAACAATAACTTTCAAACCTTTCTCGCGGCAGTT
TTATTATTATTCAGATGTGCCACGGGAGAGGCGTGGCAGGAAGTCATGCTTGCNTGTCGA
GCAGGGCGGGAATGTGACGATCGGTCCGATTGGAATACCACTGGTGCGGGTTCTGATGCA
AAGTTTCAATGTGGTAGTGACTTTGCTTACACATATTTTCTATCNTTTTACATGTTATGC
GCATTTTTGATTATCAATCTTTTCGTTGCTGTCATCATGGACAATTTTGATTACCTCACT
CGTGATTGGTCTATACTCGGGCTGCACCATTTAGATGAATTTGCGAGGGTCTGGTCCGAA
TTCGACGCAAGCGCGAGCGGTCGTATAAAACATATGAACGTTGTAAAATTACTGCGGCAA
ATACAACCACCGTTGGGATTCGGGAAGCTATGTCCTCAACGAATGGCATGCAGGAAATTA
GTCACAATGAACATGCCTCTAAATATGGACGGCACAGTTATGTTCAATGCAACACTTTTT
GCTTTAGTCCGAACGTCACTCAAGATCAAAACTGAAGGTANTATCGACCAGGCTAATGAA
GAACTTCGAGCTGTCATCAAAAAAATTTGGAAACGTACACCAGATGCGGTGCTCAATCAA
GTCGTGCCTCCTGCAGGAAATGATGACATCACTGTTGGTAAATTTTACGCCACCTATTTG
ATACAAGATTACTTTCGGAGGTTTAGGAAGAGACAAGCCAAACAATTGCGAAAATCGAGT
GGGAGTCCACTTGGGAAAAAGTCGAACGTTTACACATTACAGGCCGGCATACGAATGGTG
CAAGAATGTGGTCCNGAGCTAAAACGAACGATTTCTGGAACTTTATTGGCTAACGGCGCT
GACGAAAGCGACAGGAAATCAGTTGTTTCTGAAAACGAACCAGAACACCGGAGAAGGCAT
AGCATATTTGGACTTGTGAGCAAGGAACAACCCAACGCCGACAATAATGTAGCGATTGCT
TCAAACCGGCCTTTAAAAGTAGAAAATGAGATCACCGAGAAGAGGGATCATCATAAACAT
GATCATTACGTCGAGCAAAATCCTCTCACCAACACTTTAACACCTCGTCATCCTGTTGAC
AAGCCGAGTAAGCCAAATTCTGCGAACTCCGTTCATACAGCCAACAACAATCATACCGAC
ACCATTTTCGTGGTACCAAAGAAAGAACCAGAGTCAAACATCAAACCAANGGAAAACTAT
GACAGCGCAGGGTCAACTCAAAATGTGGGAAAGTCTCCGTTAAATGAAATTGCTCGTGAA
ATACAAACCAGTCCCAGTCACAANACGAACAATAACTCTATGATTTCGGAAGAAAGGCGA
TTGCCGATAACTAAGAGGAAATATCTCAGTGAATCCAAACGAAGAACGGTCTCGTTGGAA
GAGAANGATGAGAAAAAAATATCTCGTCAAAATCTTCTCGTCCAACCTTTCAACTCACTC
GGGCGCAACACAAATCGTAAAACTGAGCTCGACAAGTCACCGTTGCTGAAAAGCGAGTCC
AGACCGTGTTACTGCGGCAAATCGCGCACTTTCAAAAAAGGAACAGACAATCCAACACCA
GACACAAATAACCTGCGACAAAAGACATCAACAACGGGAGACTTACGTACAGAGCAAGAT
GAATTTTTCGAAATGGAAGACATGACACAGAAACGTCCCGTACTCGTTCATCAACAATCT
GATTCTTTTAACTTTGAAGAAGTTTCAAGCGGTTCGTCCTCATCGTTTTCTGACGACTAT
TATAGATCAGATATGGGCGCGGAATTCGATGACGAATACCCCTCGATGCGGACGCTTGAC
ACAGCAGACAATGTGCGATCTTCCAGTGCCTTGAAAAATAACAGAAAGTTCAACTTGTTA
GCGTCTAACTCACCGACTCAACGGAAAGATCCGTCNGCNAGAAGGAAATTGCCACCAACG
CCAAACGCACCTAAGCGTACCTTTTTAGTACCCGCCGCGGTGCATCGGAACGCAACGAAG
CAAGAAGATAGGGATTTGGAGTTAGGTAATCGTCAGTCTGAGCAAACACCCCTCTTAACC
AGCAGAACTGACTCGACTTTTAAAAGGTTCCCAGCATTGCGAAATTGTGACAAGATCGCT
GGATCGCTAGAGGACGAAGATTACGAAGTAAGCGAAATGCGTGATCCGCAACGCAATGAT
GTAATCTTATGTGACGTGAAAAACAGCAGTAATCAGCACGAAACAGGTGTTCAAATTTAC
CAGAACGATAGGAAGCAACATATGGTCGATAATCGTCACAGACCGGCCTGTTCTTCATCT
AACAAGTTTCGTCGACAACAAAGAATAGGTGACGTCGAACTGGACATAGATTCTACGCCT
TTATTGTCAACCTTTTACGAAAAACCTAACGATCCAACGTTACAAATATCCTATGATGAA
GAGACCAGTTTGGCTGATGAAATGATTGTTCCTCGAGTGGAATGAGAAAACATTGGCAGT
AGTCTTGCCTTTCCTTGCCAGAGATTATGCTCTGTATGTATGCGAGATGGTGTTATTTGC
CGGAAACGCCTACACGTCGGCATCAATGACTTTTCTTTTCCCCACAGTTTTTGCCAAGAA
GCATCACATTACAGTGAATGATCTGACATTGGCTAGACTCCGCTAGAGAGTGTCAATGCC
AGCTAGTCATTGAATCATGACGAATTCATTGCTACTTGGGTACTTCACACATACTATCAC
GGGCTGTTTTCTTAAATTGCTTTGCCCAGTCAACATGTGCATGAATCGCTCGTGGGCCGA
TAACGAATCGGTTGCCGCCTGCCGCATTTTTATTTTGTCGTGGATCACAGTTAAAACTTA
TGCTCAATAATAATTCAGCAAGGCTTCGTTTAGTATGCTGCTTGATGATTCAGAAGGATT
TAAGCTGGGTAAGAAGCATCAGACTATTCCCAATGGGTTTGAGTCATGTATATCCGATTT
TGCCCATCTCTACCTTGTCGTATGCGAGATTCTCACTGTAGTGAAAGTCCTTAACGATGG
ATATAGTGTTTTTAGGTTTATTCGATTACATCGTTAGCTTCTGTATCTTCTGTGACCTCC
CGTACGTTTGAATGCTATCAAACAATCAAAAACTCTATACTATGCCTTTATCTTGCACAC
TCACGTTCGATATAAATCAGTGTAAAGTTACCTATGCCATCAAATTGCACTTCTATAGGT
TAACGACTTTGACCTTAGAGGCTCAGTTACATATAGGATATTTTGCGCTCTTGCGACAAC
GTAATGCCGTAGACGCGTTATTTCATGACCCATTCGCGTCGGAAATTATTATTGTGGCGC
CCTATCAAGTTGGAACACTATCATTTTACTATTTTCATCCTATGATGTTAGATGGTGAGA
CTTTTTGTTGTGATAACGCGACAAATCATAGAACAATTACATGGCAGTTTCGCATAGTCT
TCACACCTGTACAAGTGTACATGCGTCGGTAGGAAATTTCATTCGATGCTTTCAAGTGTA
CAGTCAATGCTGGTTAGGAGGATTGTATGTATGTCCGTGTGTTAAATGATCATTACGTAA
AATAGCCGCTTCCTATGTGGTGCTCGTCTATATTACCAACTATACTGTGGTTATTTGATT
TTGATTGAGAAATAAATCCTATATCGTTTTACCAATACCA
| Gene3D |
Volt_channel_dom_sf (IPR027359) - T[189-317] 4.2E-29 - T[536-658] 1.1E-26 - T[911-1038] 1.7E-28 - T[1235-1357] 4.9E-38 |
| Pfam |
Ion_trans_dom (IPR005821) - T[200-482] 2.1E-66 - T[546-783] 6.3E-51 - T[920-1202] 4.6E-61 - T[1245-1503] 1.9E-69 |
| PRINTS |
VDCC_L_a1su (IPR005446) - T[227-245] 9.2E-14 - T[278-289] 9.2E-14 - T[612-627] 9.2E-14 - T[701-714] 9.2E-14 |
| PRINTS |
VDCCAlpha1 (IPR002077) - T[320-335] 1.2E-64 - T[433-450] 1.2E-64 - T[472-496] 1.2E-64 - T[710-736] 1.2E-64 - T[1193-1213] 1.2E-64 - T[1363-1377] 1.2E-64 - T[1411-1423] 1.2E-64 |
| Pfam |
GPHH_dom (IPR031649) - T[1505-1575] 9.1E-31 |
| Pfam |
VDCC_a1su_IQ (IPR014873) - T[1576-1650] 2.9E-28 |
| SMART |
VDCC_a1su_IQ (IPR014873) - T[1627-1661] 1.2E-13 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CAC1C_HUMAN | 57.688 % | 1907 | 0 |
| CAC1D_HUMAN | 54.662 % | 1771 | 0 |
| CAC1S_HUMAN | 56.872 % | 1867 | 0 |