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TRANSCRIPT CARD

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  1. Molecular Tool 'Neurogenin-MO (Imai 2009)' > 
  2. Transcript 'Boleac.CG.SB_v3.S123...'

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S1236.g01836.01.t

Possible name(s)

TNXB

Gene model

Boleac.CG.SB_v3.S1236.g01836

Location

S1236 [3,818 / 7,200]

Sequences

Amino acid sequence

Length: 273

>Boleac.CG.SB_v3.S1236.g01836.01.p
MLQALILLLFCFVALATGQTCVKRFVGGKLKSYGNCENAAKAQSVVAGIKNKTEAEKEPE
MGSCRNKNLTFAKIRNDTGGVFDIYIPNVGVTEVFCDTTTDGGDWIVFQRRMDGSVDFYR
NWTDYVTGFGSRSGEFWLGLEALHELTKTGQHELRFDMVDTAGNRLYANYSSFKIGPGSG
NYVLSVSGFSGNAGDGFAGFHNGSAFSTFDKNNGGSSARNCAMLYHGAWWYSACHWSNLN
GQYGVRGDKGMKWYNKSKLFWATFTEMKLRQKK

Nucleotide sequence

Length: 867

>Boleac.CG.SB_v3.S1236.g01836.01.t
CGGTCATCACGGTTGCATTCGTAAAGCGCTTCGATCGGCGAGGAGATGTTGCAAGCTCTC
ATTTTACTATTGTTCTGTTTCGTTGCCTTGGCGACTGGTCAAACATGTGTGAAACGCTTC
GTCGGTGGCAAATTGAAATCGTATGGGAATTGCGAGAACGCGGCCAAAGCTCAAAGCGTA
GTCGCCGGCATCAAGAACAAAACCGAAGCAGAAAAAGAGCCTGAGATGGGAAGCTGCAGG
AATAAGAACCTGACTTTTGCAAAGATTCGCAACGACACTGGCGGAGTCTTCGATATTTAC
ATACCTAATGTCGGCGTCACCGAAGTCTTTTGTGACACAACAACGGATGGCGGAGACTGG
ATAGTGTTCCAACGGCGAATGGACGGAAGCGTGGACTTTTATCGAAACTGGACGGATTAC
GTCACCGGATTCGGCAGCCGAAGCGGAGAATTCTGGCTCGGTCTCGAAGCGCTTCACGAA
CTAACGAAAACGGGGCAGCATGAATTGAGGTTCGACATGGTGGATACCGCTGGGAATCGT
CTTTACGCCAATTATAGCTCCTTCAAAATCGGACCGGGGTCGGGAAATTACGTTCTGTCC
GTCAGCGGATTCTCCGGGAACGCCGGCGATGGTTTTGCAGGCTTTCATAACGGCTCGGCG
TTTTCAACGTTCGACAAAAATAATGGAGGAAGCAGCGCAAGAAACTGCGCGATGCTGTAT
CATGGAGCTTGGTGGTACAGCGCCTGCCACTGGAGCAATCTCAACGGGCAGTATGGCGTG
AGGGGCGACAAAGGAATGAAGTGGTACAACAAAAGCAAACTGTTTTGGGCGACTTTTACT
GAGATGAAACTCAGACAGAAAAAGTAA

InterProScan

ProSiteProfiles
Fibrinogen_a/b/g_C_dom (IPR002181) - T[55-273] 49.11
SMART
Fibrinogen_a/b/g_C_dom (IPR002181) - T[72-272] 1.6E-71
SUPERFAMILY
Fibrinogen-like_C (IPR036056) - T[75-271] 1.3E-68
CDD
Fibrinogen_a/b/g_C_dom (IPR002181) - T[78-270] 9.16289E-86
Pfam
Fibrinogen_a/b/g_C_dom (IPR002181) - T[91-270] 3.0E-55
ProSitePatterns
Fibrinogen_CS (IPR020837) - T[229-241] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TENA_HUMAN 45.933 % 181 1.06E-51
TENR_HUMAN 47.222 % 182 3.61E-52
TENX_HUMAN 50 % 187 7.64E-54