- Transcript 'KH2012:KH.L4.29.v2.C...' >
- Transcript 'KH2012:KH.L4.29.v2.C...' >
- Transcript 'Cisavi.CG.ENS81.R112...' >
- Transcript 'KH2012:KH.L4.29.v1.C...' >
- Transcript 'Boleac.CG.SB_v3.S124...'
Transcript Model
Transcript Id
Boleac.CG.SB_v3.S124.g01847.01.t
Possible name(s)
CLPX; SPAST; YME1L1
Gene model
Location
S124 [33,616 / 43,974]
Amino acid sequence
Length: 652
>Boleac.CG.SB_v3.S124.g01847.01.p
MAMSIRTGCNITTRVGKFMGSTSGTQFKVKAFNNENTFLKPICSYSSTVPFKPTCLEVFD
NLEFYGSRTTLPQQLQFPKIQFDNHQSRAFSSSADDNGQGKDGNRKDKKPTKKTKSPSKG
GHNGSSENGGSQIACPECGHPTQHTDNTARFVKCEKCWRLFQVAHGGEKSQHEIHKAQDN
AWENKPPPTPKQILEYLDRYVIGQSHAKKVLSVAVYNHYKRIQNNSATSKYSSPPNPESD
HGQHYTSRDILHMSGILPSNSIGKSMGTGSVHDELFNDNRGRAAGKTKPKGIADAIESDL
EQEIVLEKSNILLLGPTGSGKTLLAQTLARCLDVPFAICDCTTLTQAGYVGEDIESVISK
LLHDANGNVEKGQQGIVFLDEVDKISCVPGVHQLRDVGGEGVQQGLLKMLEGTIVNVPER
NSRKLRGETVAVDTTNILFVASGAFNGLEKIXGKRKNEKSLGFKQRRHDSTNELNEPLSV
NMGFESKMASTIQENLERDRLLHGTEARDLIEFGMIPEFVGRLPITVALHSLTAEHLMLI
LTEPKNAIVQQFQSLFNMDKADLAITPCALEAIANMALERKTGARGLRSMLEKLLLDAMF
EVPGSDIIGVCIDKDVVNGSKGPDYIRAPVEPKSSENDDADDEAPQETRFRL
Nucleotide sequence
Length: 3,684
>Boleac.CG.SB_v3.S124.g01847.01.t
GTTCATCTGTCANATCGTCGGTTGGATAGGCCAAACGTTAAACTGCCCTTTACGGTAGCA
TACAGTGTAGAGTTGGCTAACCGTTTGTTAACGGGAGCCTGCCCAGCTGGAGCTGAAGCT
GAAGGCCCCATTTAATCCTCATCCCCGTCAACATATAATCGAAATCCTGCCTCTAGTACA
AACCTTTAAACATGGCAATGTCAATACGTACTGGCTGCAATATTACAACGAGAGTCGGAA
AATTTATGGGCTCAACTAGCGGTACGCAATTCAAAGTAAAAGCCTTCAATAATGAAAATA
CGTTTCTGAAGCCAATATGTTCGTACTCAAGCACTGTGCCTTTCAAACCCACCTGCCTTG
AAGTTTTTGACAATCTTGAGTTTTATGGATCAAGAACCACATTGCCTCAGCAGTTGCAAT
TTCCAAAAATTCAATTTGACAATCACCAATCTCGTGCATTTTCATCTTCTGCTGATGATA
ACGGTCAAGGAAAGGATGGAAATCGAAAAGATAAAAAACCAACAAAGAAGACAAAATCAC
CATCAAAGGGTGGACACAATGGATCGTCAGAGAATGGAGGAAGTCAAATAGCATGCCCAG
AGTGTGGGCACCCAACTCAACACACAGATAATACTGCAAGATTTGTTAAATGTGAGAAGT
GTTGGAGGCTCTTCCAAGTGGCACATGGAGGTGAAAAAAGCCAACATGAAATCCACAAGG
CTCAAGATAACGCATGGGAAAATAAGCCCCCGCCCACTCCGAAGCAGATATTAGAGTACC
TGGACAGATATGTGATCGGTCAAAGTCATGCCAAGAAGGTTCTTTCTGTAGCTGTATATA
ACCATTACAAGCGAATCCAGAACAATTCAGCGACATCCAAATATTCCAGTCCCCCTAATC
CAGAAAGTGATCATGGGCAACACTATACCTCAAGAGACATACTGCATATGAGTGGGATTC
TGCCCAGTAATAGCATTGGAAAAAGCATGGGCACTGGATCTGTTCATGATGAGTTGTTCA
ATGATAACCGAGGTAGAGCTGCAGGAAAAACAAAGCCAAAGGGAATAGCCGATGCTATTG
AAAGTGATTTGGAGCAAGAAATCGTCTTGGAGAAAAGCAACATACTCTTGCTTGGCCCTA
CAGGATCTGGTAAGACTCTACTTGCACAGACATTAGCTCGTTGCTTGGATGTACCATTTG
CAATATGTGACTGCACAACATTAACACAAGCTGGTTATGTTGGGGAAGATATTGAATCTG
TTATCAGTAAACTTTTACATGATGCAAACGGAAACGTGGAGAAAGGACAACAAGGAATTG
TCTTTCTGGATGAAGTTGACAAGATAAGTTGCGTTCCTGGTGTTCACCAACTTCGTGATG
TAGGAGGAGAGGGGGTCCAGCAGGGCCTGTTGAAAATGCTTGAGGGTACGATAGTCAATG
TGCCGGAACGAAATTCAAGGAAGCTACGTGGCGAAACAGTTGCAGTTGACACTACCAACA
TACTTTTTGTTGCCTCTGGTGCTTTTAACGGCTTGGAAAAGATAATNGGAAAGCGAAAAA
ATGAGAAATCGTTAGGCTTCAAGCAAAGGCGTCATGATTCGACAAACGAATTGAATGAGC
CATTATCGGTTAATATGGGATTTGAAAGCAAAATGGCCTCTACTATACAAGAAAATTTGG
AACGTGATCGTCTATTACATGGCACGGAAGCCAGGGATCTTATTGAGTTTGGAATGATTC
CGGAATTTGTCGGTCGACTGCCAATCACCGTTGCACTTCACAGTCTTACTGCTGAGCATC
TCATGTTGATATTAACGGAACCTAAGAATGCTATCGTGCAGCAATTTCAGTCACTCTTCA
ATATGGATAAAGCAGACTTGGCAATAACACCTTGTGCACTTGAAGCTATTGCAAATATGG
CCCTGGAAAGGAAAACGGGTGCTCGAGGGCTGCGTTCTATGCTTGAAAAATTGCTTCTGG
ACGCCATGTTTGAAGTACCAGGAAGTGATATCATCGGTGTATGTATAGATAAAGATGTAG
TTAATGGAAGTAAAGGTCCAGATTATATAAGAGCACCGGTTGAACCTAAATCTTCAGAAA
ATGATGACGCCGATGATGAGGCGCCGCAAGAGACTAGATTTCGATTATAGTTCGCCTTTT
TAGTACTGTTTTATTGGTGTATGTGTTTTAAACTCGTTGCGTGATTTCATTGCAATATAT
TTTCCCATTGTGCTTATCGGTCAAGGTTATTTGACTACACTACTTAATTGTTCCGGTAAA
TGTATTTTGTCATATCCAAGTCTCCATTTGAAATCGTGTAATATATTTTTGCCCCCTTGT
GGTGTAGTATTCCCCCATATCTAGGATACGGCAGATAGGAGTGATATGACCACAGAGTTC
CGACTTTCGACGGGGCTGCCCTGCTTTTATGTTACGCATCCTGCTTTTTTCATGTACGAA
AACGTCCGATTTTAGGCGAAATGTCCCGTTTTATCCGACTTTTGAAGACAAGAGTTCCAA
GTACACCCCGTTTTAATGTCGCATGCTTCCTGATTTGCCCCGTTTTTCCTTGGTAAAAAT
TGGACAGCCCGTTTTTAGTAGACTTCAAAATGTGCCATTCAAACATGAATTAGCGATTAT
TGACATCCAAAATCAGGTGTCTGATTTTTAAAAATTCCATAACTCATTACGTATGTGCAA
AGCTTCACCTAAAAGATGGTGATCGGCTACGCATGTGAAGTCACGTTTAACAATGAATTG
TGCAAATTGTCCGACCCTTATATTCCCCGCCAAATGATAGACATGTGCAAAGCTGAAAAT
TCCAGATGCAACCAAAACTATGGGGGTCTTATGACAGGCAAATGCTAAACAGGCTTCAAT
ATTTTGAAGTATATTGAAACCTTTATCAGTCCATAAGAGAAGCATGGGCGACTCCAGCTA
TACAGTCCTTCAGATATCTTGATTGCTAACCTTCCCATTACATATGTGTACTAGTTTTCC
CCCTTGACTTGTATCGAATTTTTTGAGAACAATGATATTAATGACGGCATTCCTGCCTAC
TTTTGTGTTATATTGTTACTGCGAAAACGGTATGTATGGATGATTTTTCCCCTATGGTGG
ATTTGTGGTCGAAAATGTTTGTAACTGATGCGTCGAGTGTGCCGCTACTGCGGCTAACAA
TAATGGAAATCACGCGTTGCCATTCCGTTGTTCCTTGCAAATTGCAATGAAGTATCTTTT
ACGTTCACTAATTTTGTTTATAGTGCTTTACTCATAATACTGTTTACTGTCACCTAACCT
CAACCTAAACTTAATCCATAAGAAGGCTTACCGATCCATATCCAATTCATAAAATCTTGG
CGCCTCGCGTTTGCCTTGAGCCTTTATGTAACGGTGCACAAGCACCTATTCGGGGAAAAT
CGGTGTTATATTGACACCGGTCGTGTTTGGAAGGTGTATCTTTACGTGAACTTCCGCAGC
AGGTTAGATGTTGTACGGTGTATGTACATGTTTTTTTGTAGTTATAATTTTTGTGCGTTC
AGACTCCGATTTGTTTGTTTCCATTGCGTCATAACTTTGGTCGTTCATCGAGCTTGATGT
CAAGAAATTTTATGAATTTTCCCATGTTTCATGACTTCAGGAGTAATTGGTTTGTCTGCA
GAACGAATGTTTCGCTGATTGTAA
| PANTHER |
Clp_protease_ATP-bd_su_ClpX (IPR004487) - T[131-642] 4.9E-179 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[188-221] 9.81E-56 - T[280-616] 9.81E-56 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[307-525] 8.7E-41 |
| SMART |
AAA+_ATPase (IPR003593) - T[307-529] 2.9E-9 |
| Pfam |
Clp_ATPase_C (IPR019489) - T[532-603] 1.0E-11 |
| SMART |
Clp_ATPase_C (IPR019489) - T[532-626] 1.0E-22 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| CLPX_HUMAN | 57.036 % | 541 | 0 |