Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S124.g01848.01.t

Possible name(s)

CDIPT; CRLS1

Gene model

Boleac.CG.SB_v3.S124.g01848

Location

S124 [44,330 / 47,172]

Sequences

Amino acid sequence

Length: 216

>Boleac.CG.SB_v3.S124.g01848.01.p
MKTTARDVLLFVPNLIGYVRIILALVAFYVIKTDYIVASSCYIISGLLDAFDGHAARMLN
QGTKFGAMLDQLTDRAATACLVVTLASFYPEYSFWFQLSLALDIVSHWMHLHVSLIGGVS
HKSIGLEGNPIMRLYYTSRPVLFVMCSGNELFFAMLYVLHFTEGTYVEMFNVGLPRLILY
ISAPIMILKTLVSVIHLVDASTRLAAIDAEERSKDE

Nucleotide sequence

Length: 1,318

>Boleac.CG.SB_v3.S124.g01848.01.t
CTCAGAACCCGGCTTTTGACTATTTTCAAGCACTACTGGGATTCGGGGATGATATAATAC
TATACTCCACAGTGTTTCCAGTGTCGGTTTCTGTAACCGCGGTTAGCAATCGATGTAAAC
AAATCTTCGCAGAACTAGAATTCGCTTCGCCCGTTCCCTTCTCTTGCAGTCCCGACTGAA
CACCTCTTGCTAGGAAGAATGAAGACTACTGCTCGGGATGTTTTGTTGTTTGTGCCAAAT
CTTATAGGTTACGTTCGGATCATTCTTGCATTGGTTGCATTCTATGTGATAAAAACAGAT
TACATTGTTGCCTCGTCATGTTACATTATCAGTGGACTACTGGATGCTTTTGATGGCCAC
GCAGCACGTATGCTAAACCAGGGTACTAAGTTTGGTGCTATGCTTGACCAACTAACGGAT
CGTGCAGCTACTGCTTGTCTTGTTGTGACACTTGCATCGTTTTATCCTGAATACTCCTTT
TGGTTCCAGCTAAGTCTTGCATTGGACATTGTTAGCCATTGGATGCATCTTCACGTATCT
CTAATTGGGGGTGTCAGTCATAAGAGCATAGGATTGGAGGGAAATCCTATCATGCGCCTT
TACTACACATCTAGGCCAGTTTTGTTTGTAATGTGCAGTGGGAACGAACTCTTCTTTGCC
ATGCTTTATGTTCTCCATTTCACAGAAGGAACTTATGTGGAAATGTTCAATGTTGGCTTG
CCCCGACTGATCCTTTACATCAGTGCACCAATCATGATTCTGAAAACTCTTGTCAGTGTG
ATACATCTTGTGGATGCATCTACCAGACTTGCTGCGATAGATGCGGAGGAACGGTCGAAA
GATGAATGATTGTCTTTGTCGCTTTGCTATTGATGCTTACGACGCTGAATATTGCTTGAT
GTATAATTACCGAGAATGAAATTGCGTTATAGTTGCATTGGGTATCCCACATAATCATTG
TCAGCTAGAAAGTAGCTACTGAACCTAAACCTTTAAATTAAGGTTGCAAGTGGCTTTATG
TATCCCAAGGCAGGCCTGAACCAGCACTTTTGTGTCAATAAAAACTTACCTGTGACTGCA
TCCGACATACGGTACTTGCCATATTGGGACATAAAATGTTGATCATGATGCCAACAATTA
CACGATTCACCCAGATCCGACTTCGTTGGATTCTGTATGCCTACTTCTAGACAAGTGATT
CTCCTAAAAAGACGTTTTTTAAATTCCTTGGCTTTGGCATCCTCCTTTTGCATTATAAGT
TTCTTCATTTTTTAGTGTGCTAGAATTGCGTGAAATATATCCCAGATCTGTAATGAGA

InterProScan

PIRSF	CDP_diag_ino_3_P_euk (IPR014387) - T[1-216] 1.9E-83
Pfam	CDP-OH_P_trans (IPR000462) - T[12-74] 1.1E-13
ProSitePatterns	CDP-OH_P_trans (IPR000462) - T[52-74] .

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CDIPT_HUMAN	56.604 %	260	7.38E-89