Aniseed - Transcript Card

Transcript Model

Transcript Id

Boleac.CG.SB_v3.S1272.g02024.01.t

Possible name(s)

ATL1; ATL2; ATL3

Gene model

Boleac.CG.SB_v3.S1272.g02024

Location

S1272 [4,107 / 8,820]

Sequences

Amino acid sequence

Length: 515

>Boleac.CG.SB_v3.S1272.g02024.01.p
MQILQKLVFVVRDWQQVEDHEYGLDVTEKDDGEIGYLDSVLTCASDNKELSSVRKQLKES
FNDLKCFLLPHPGRKVALSGKKFPFHGEVQDIDGEFLAEIQSLSDFLLNPRNCVQKKIYG
SVITANSLVNYAIACGRAFQAGGLPEPQTMLQASAKVMNLHLMNTCVDEFSQMMNQQCSS
FVLXEDFRAAYKKAQSEALRIFDENARYGDKLDRDKIRANLIVRLRMQFEMYESRNQARA
SEIQTSVRESGDHFVRVYASMMNDATKNLILSEEKFMLHHRQHYNNCLGSFIAENEGKIG
FDKALEIVKKDFDFAFNALFRQNADKQRYVDVRTLLSKYSESAIVKRKHKDFTESAVEKL
RNLAQGIQTSKIEQFESRLLSRIDKEYDEAQPKIEQTKKILLMTLEGKKSEMVSVYLSMM
SENIGDSYVLPEILEEQHRIAVEKLSEAMKTYDQVEEVCWDAEFSPTVLSYVDELKVQLD
EKYCSIRDNNEINKKFYMKTKKSAFKKFLKFFSRS

Nucleotide sequence

Length: 1,548

>Boleac.CG.SB_v3.S1272.g02024.01.t
ATGCAAATACTTCAGAAACTGGTTTTCGTTGTTCGAGACTGGCAGCAAGTAGAAGACCAC
GAATACGGGTTAGACGTAACAGAAAAAGACGATGGCGAAATAGGATACTTGGACAGCGTC
TTAACTTGTGCTTCTGACAATAAGGAGCTGAGCTCGGTGAGAAAGCAATTGAAAGAGAGC
TTCAATGATTTGAAATGCTTCTTGCTACCACATCCTGGAAGAAAGGTTGCCTTGTCAGGG
AAAAAGTTCCCATTTCACGGGGAAGTCCAAGATATCGATGGAGAATTTCTTGCAGAGATC
CAGTCTCTTTCGGATTTTTTATTGAATCCNAGAAATTGTGTCCAAAAGAAAATATACGGA
AGCGTAATAACTGCGAATTCACTTGTCAACTATGCAATTGCGTGCGGACGAGCATTTCAA
GCTGGTGGACTACCAGAGCCGCAGACCATGTTACAGGCATCTGCTAAAGTAATGAATTTG
CACCTGATGAACACTTGCGTCGATGAATTCAGTCAAATGATGAACCAGCAATGCTCAAGT
TTCGTACTGGANGAAGACTTCAGAGCAGCTTATAAGAAAGCACAGAGCGAGGCGTTGCGT
ATTTTTGATGAGAACGCTCGTTACGGTGACAAATTGGATCGCGATAAAATCAGAGCCAAC
CTCATCGTGCGGCTTAGGATGCAATTTGAAATGTACGAATCGAGAAATCAAGCACGTGCA
AGTGAAATCCAAACATCAGTCAGAGAAAGTGGAGACCATTTCGTAAGAGTATACGCTTCT
ATGATGAATGACGCTACCAAGAATCTTATTTTATCTGAAGAAAAATTCATGCTGCACCAT
AGACAACATTACAACAATTGTTTGGGATCTTTTATCGCCGAGAATGAAGGAAAAATTGGA
TTTGATAAAGCGTTAGAAATTGTCAAGAAAGATTTCGATTTTGCGTTCAATGCCCTCTTC
AGACAAAACGCTGATAAGCAACGATACGTTGATGTGAGAACGTTACTGAGTAAATACTCA
GAAAGTGCGATTGTCAAGCGAAAACACAAGGATTTCACCGAATCTGCGGTGGAGAAATTA
CGTAATCTTGCTCAAGGAATTCAAACATCAAAAATCGAGCAGTTTGAAAGCCGTTTATTA
TCAAGGATTGACAAGGAATACGATGAAGCACAACCTAAAATAGAACAAACCAAGAAAATT
CTCTTGATGACCCTTGAAGGGAAAAAGTCTGAAATGGTGTCAGTGTACCTATCTATGATG
TCTGAGAACATCGGGGATTCGTACGTGTTGCCTGAGATACTGGAGGAACAGCATCGAATA
GCCGTTGAAAAGTTATCAGAGGCAATGAAAACTTATGACCAAGTAGAAGAAGTATGCTGG
GATGCAGAGTTTAGTCCGACCGTTTTGAGCTACGTCGACGAATTGAAAGTACAACTCGAT
GAAAAATACTGCAGCATCCGAGACAACAACGAGATCAACAAAAAGTTTTACATGAAGACA
AAAAAGTCTGCTTTCAAAAAGTTTTTGAAATTCTTTTCAAGATCATAA

InterProScan

Pfam	Guanylate-bd_N (IPR015894) - T[2-115] 2.5E-11
SUPERFAMILY	Guanylate-bd_C_sf (IPR036543) - T[120-212] 3.01E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
ATLA2_HUMAN	38.202 %	121	2.96E-29
ATLA1_HUMAN	33.01 %	119	7.18E-29
ATLA3_HUMAN	38 %	105	2.68E-24